Cuculus canorus (common cuckoo): 104063842
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Entry
104063842 CDS
T08597
Symbol
TARS1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104063842 (TARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cuca01007
]
104063842 (TARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104063842 (TARS1)
Enzymes [BR:
cuca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
104063842 (TARS1)
Amino acid related enzymes [BR:
cuca01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
104063842 (TARS1)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104063842 (TARS1)
Prokaryotic type
104063842 (TARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
104063842
NCBI-ProteinID:
XP_009564403
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All DBs
Position
Z:complement(66271608..66312925)
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AA seq
711 aa
AA seq
DB search
MAGAGAEVNAEEEKKADCGKKKPKDGVGDGGRMELNPWPAFINERLEMYNKLKAEHDALL
AERATNDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKMVWDLDRP
LEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERIYGGCLCYGPPIENGFYYDMFLEEG
GVSSNDFSTLETLCKKIMKEKQVFERLEVKKETLLEMFKYNKFKCRILNEKVNTPTTTVY
RCGPLIDLCRGPHVRHTGKIKTIKIHKNSSTYWEGKADMESLQRIYGISFPDAKMLKEWE
KFQEEAKNRDHRKIGRDQELFFFHELSPGSCFFLPKGAYIYNTLIEFIRNEYRKRGFQEV
VTPNVFNSKLWMTSGHWQHYSDNMFSFEVEKEIFALKPMNCPGHCLMFDHRPRSWRELPL
RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEEEIKSCLQFLRAVYDVFGF
SFKLNLSTRPEKYLGDIEVWNQAEKQLENSLNDFGEKWELSPGDGAFYGPKIDIQIKDAI
GRYHQCATIQLDFQLPVRFNLTFVSHDGNDKTRPVIIHRAILGSVERMIAILTENYGGKW
PLWLSPQQVMVVPVGPTCDEYAQKVRQHFHDAGLMADVDVDPGCTLNKKIRNAQLAQYNF
ILVVGEKEKASGTVNIRTRDNKVHGERTIADTVERLLELKCSRSRQAEEEF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgctggtgcagaggtaaacgctgaggaggaaaaaaaggcagactgcgggaag
aagaaaccgaaggacggagtcggcgatggagggcggatggagctgaatccctggcctgcg
tttatcaatgagcgtttagaaatgtacaataagcttaaagctgaacatgatgccctcctc
gcagaaagagctacaaatgacagtaaacccattaaagttacattacctgatggcaagcag
gttgatgctgaatcctggaagactactccttatcaaattgcttgtggaattagtcagggc
ttggctgacaacactgttattgctaaagtgaacaagatggtttgggatctagaccgtcct
ttggaggaggattgtaccttggagctgcttaagtttgaagatgaagaggctcaagcagta
tactggcactcaagtgctcacataatgggtgaagctatggagcgaatctatggtggatgt
ttgtgctacggtccaccaatagaaaatggattttattatgacatgttccttgaggaaggg
ggtgtatcaagtaatgacttctccactttggaaacattatgcaaaaagataatgaaagaa
aaacaagtctttgaaagactagaagttaagaaggaaacactacttgaaatgtttaagtat
aataaattcaagtgtcgcatcctgaatgagaaggtcaatactccaactacaacagtatac
aggtgtggtcccttgatagatttatgcagagggcctcatgtcaggcacactggcaagata
aaaaccataaaaatccataagaattcttctacctattgggaaggcaaggctgacatggag
tccctccagcggatctacggaatttcattcccagatgcaaaaatgctgaaggaatgggag
aaattccaggaggaggctaagaacagagatcacaggaaaatagggcgggaccaagaactg
tttttcttccatgagctcagtcctggtagctgttttttcttgccaaaaggagcttacatt
tataacacgttaatcgaattcatccggaatgagtatcgaaaacgtggattccaggaggtt
gtcactccaaatgttttcaacagcaaactgtggatgacttcagggcactggcagcattac
agtgacaacatgttttcctttgaagtggagaaagaaatctttgctctgaaacctatgaac
tgtccagggcactgccttatgtttgatcatcgtccaagatcatggcgtgagctgccgtta
cggttggctgattttggtgttctgcatcgcaacgaactgtcaggagctcttacaggactc
actcgagtgcgccggttccagcaagatgatgctcacatattctgtgctattgagcagatt
gaagaggagataaagagttgtctgcagttcttgcgtgctgtgtatgatgtctttggattt
tcctttaaactgaatctctccactcgtcctgaaaagtacctaggagatattgaagtgtgg
aatcaggctgaaaagcaacttgaaaacagcctcaatgactttggtgagaagtgggagtta
agccctggtgatggagccttctatggaccaaagattgacattcagattaaagatgccatt
ggccgctaccaccaatgtgctacaatccaactcgacttccagctgccagtcagatttaac
ctcacctttgtcagccatgatggcaatgacaagacaagaccagttatcattcaccgggct
atcttgggatctgtggaaagaatgatcgccattctaactgaaaactatggaggcaaatgg
ccactatggctgtccccgcagcaggtgatggtggtaccagtgggaccaacatgtgatgag
tatgctcaaaaggtcaggcagcacttccatgatgctggattaatggcagatgttgatgta
gatcctgggtgcacactgaacaagaagatcagaaatgctcagcttgcacagtataacttt
attctggttgttggtgaaaaggagaaggcaagtggaacagttaacatccgcacccgagat
aacaaggtgcatggtgagcgtacaattgcagacactgtggagagactgctggaactgaaa
tgctctcgctccagacaagctgaagaggagttttaa
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