Cuculus canorus (common cuckoo): 104063858
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Entry
104063858 CDS
T08597
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03082
ATP-dependent chromatin remodeling
cuca04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104063858
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
104063858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104063858
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
104063858
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
104063858
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104063858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
DUF1764
Clp_N
Motif
Other DBs
NCBI-GeneID:
104063858
NCBI-ProteinID:
XP_053935314
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All DBs
Position
14:17306185..17351954
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AA seq
372 aa
AA seq
DB search
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKTVSKKTGGKKGARKSKKKQGEVSKSASADSTTEGTPA
DGFTILSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGSTLEKKGGKE
FVEAVIELRKKNGPLDIAGAVVSAGHGLPAKFVIHCNSPGWGSDKCEELLEKTVKNCLAL
ADEKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaggggtggaaagaagaagtcaacgaagacttcccgctctgcaaaggctggg
gtcatattccctgttggaagaatgctacgttacattaagaaaggccacccgaagtacaga
attggtgttggtgctccggtgtacatggctgctgtacttgaatatctgactgcggaaatt
cttgaattggctggaaatgcagcaagggacaacaagaagggtcgagtcactcctagacac
atcctgttggctgtagcgaatgatgaagaattaaatcagctattgaaaggagtcaccata
gccagcggtggagtgttgcccaatattcacccagagctgttggcaaagaagcggggatca
aaaggaaaactggaagccatcatcactccacctccagcaaagaaggcaaaatctccatca
cagaaaaaaactgtatcaaagaaaacaggtggcaagaaaggggcaaggaaatccaagaag
aaacagggagaagtgagcaaatcagccagtgccgacagcacaacagagggaactcctgca
gacggttttacaatcctgtccaccaaaagtctgtttcttggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggcttcgaggtggaggccattatcaatcctaccaat
gctgacattgaccttaaagatgacctagggagcactttggaaaagaaaggcggcaaggag
tttgtggaagctgtcattgagcttcgcaaaaagaacgggccattggacatagccggagct
gttgtcagtgctgggcacggattgcctgcgaaatttgtgatccactgtaacagcccaggc
tggggctcagacaaatgcgaggagctgctggaaaagacagtgaagaactgcttggctctg
gctgatgaaaagaagctgaaatcaattgcatttccttcaattggcagtggcagaaatggc
ttcccaaagcaaacggctgctcagctgatcctgaaagccatctccagctattttgtgtca
acaatgtcctcttcaatcaagacggtgtacttcgtgctctttgacagcgagagtataggg
atctacgtgcaggaaatggccaaactagatgccaactaa
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