Cuculus canorus (common cuckoo): 104063996
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Entry
104063996 CDS
T08597
Symbol
PTPRB
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104063996 (PTPRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cuca01009
]
104063996 (PTPRB)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104063996 (PTPRB)
Protein phosphatases and associated proteins [BR:
cuca01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104063996 (PTPRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
FN3_Tor_3rd
Fn3_Dep-1_4th
Ig_ILCR1
PTP_tm
CysR_MRC2_N
Pur_ac_phosph_N
Tc-R-P
Ricin_B_lectin
PTP-SAK
Glyco_hydro_66
DSPc
Y_phosphatase3
PTP-NADK
PTPlike_phytase
Big_4
P_gingi_FimA
Motif
Other DBs
NCBI-GeneID:
104063996
NCBI-ProteinID:
XP_053914029
LinkDB
All DBs
Position
1:complement(158878636..158944136)
Genome browser
AA seq
2212 aa
AA seq
DB search
MDSLFHVLVSTCLALTFSEGFLIIHEQKQQCLSEKRGVIMEKCNMTNLNQQWQWTADDRL
LHMKSKQCLSISTRSALSSRSIIVDCPQAVRWTCHEDGLLKVANSSLFLTKQGQKVMAKQ
SKKYLHTWMQLEASETGKPVYVNLCSKQDLQDTVTSVPSTRPTSSTLNAVTSSPENLLKS
STETFIRNVTEHFSKNLIESLYFDLKSAVTEKPWLPTTTFQYSSTTEEAAPREAAGCLAS
LMEREVSGQSVRLRWGAAGPACNFSVAGSSEDGEAAGCQPSPAGNGSFGCTLRGLSAGTW
YQLRIEPLAGGEAVNISLRTDPLPPPRFEINKEKTTLTSLQVQWDPPSGKVDLYNLVLFD
HDNKKIEEVSIPGRFSRTENTFSSLIPGNKYKIVLSAVAGNKSTPELHISGSTVPSPVKN
VQVTVKTDTIHASWSPGSGHVDRYKLMLLDNHVLVHEIHQEDPLTSYTFSGLTAGHSYNL
SIITQAAGLESSSFQTVRTAPAEVLDLTVTNDDSLDALKVKWRRPPGDLSFYNITLSHLG
SVKEVKTLQPLVTETHFDKLTPGRLYQVTARTISGELFADRMATGRTFPQKVSELKASGG
GWLKSLRVNWLPPAGDWERYRLLLWNHSALLLNTTLEKEVTEYLIHDLGLIPGRQYDVDV
IVESGDLQSKTSCTGRTAPEPVLQLRVKHANESSLSVMWMTPVAEWDSYVVSLGDRDLTV
IKKGLAKEAKEFTFTDLVPGRKYTATITTISGILSNWTSVEGRTVPAQVTGLTVTSQGST
NSLFTNWTRALGDVDSYQVLLIHENVVIKNETVPSETNRYHFYPLKPGGLYSVVVTTVSG
GISSRQTIAEGRTVPSSVTGVTVNNSGRSDYLSVSWLPASGDVDSYLVTLSHDDQIVQSL
TVSKSFSECSFSSLTPGTLYNVMITTKSGKYENYSFSQERTVPSSVQGLTVSNSARSDYL
KVSWLHASGYFDDYEVVIKNNNDFIQTKTIPKDENECVFTNLVPGRQYSVTVSTRSGKYE
TSERVYGRTMPESVKELTLSNRSTEDLQVTWSKAEGDVDKYEIQLLFNDMKIFPPIFLGN
TIEEYWFTALTPGRLYKILVLTISGDAQRATFIEGLTIPSTVRNIHVSPNGMTNSLKVSW
TPGSGDVDSYTVTIFQQNHQLDSQSVSKHVSEHTFHKLEAGEQYQVVVQSNSGTLHNSLA
AFGRTIPAPVQELLAHHAYTSHSLLVTWQKAPGVAERYDILLLNEQGILLSNKSEPATSK
QHKFEDLLAGKKYKIQVLTVSGGLFSKRAETVGRTVPAAVTNLKVTENTTDQLSFSWTTS
QGELDSYDIFLYNPDKSLHDRISGEQQLQNCSFQNLRQGRIYRMVIVTHSGDLTNESSVF
GRTVPAPVVGLKASNRNMTDSLWFTWGPAAGDVDFYELTLYNPNGTQKETWHRKDLKEWH
FQGLIPGRKYTLVVVTHSGDLTNTANAEGRTAPSPPNTVSFTDVANTSLSITWLGPPDWT
DYDDFELQWLPKDPLTVFNPYSSSKSKVRIIYGLRPGRLYEFSVRTVSGDSWKTYSQSQS
ASVRTKPDKIQSLHCRPQTSTAIACSWTPPDSDFDGYSVECKKMDTREVEFSKRIEKDKS
LLNIMTLVPHKRYLVSIKVHSADMTSEVVEDSTITMIDRPPQPPPDIRVNKKEVLITKSS
INFTFNCSWFSDTNGAVKYFTVVVREADGSEGPKPDEQHPLPSYLEYKHNDSIHIYQTNY
FASRCAENPDSDYKSFDIKLGGEMENLGGRCDPDQQKFCDGPLKPRTAYRISIRAFTQLF
SEDPKELPKPLFADTFFSLPITTEAEPLFGVIEGVSAGLFLIVMLVAVTALIVCRQKVGS
GHERTTPRLNIRRDRPLSVHLNLGQKGNRKTSSPIKVSHFEAHFTKLQADSNYLLSKEYE
DLKDVGRNQTCDIALLPENRGKNRYNNILPYDTSRVKLSNVDDDPCSDYINASYIPGNNF
RREYIATQGPLPGTKDEFWKMAWEQNVHNIVMVTQCVEKGRVKCDHYWPLDQDSLYYGDL
IVEMLSESVLPEWTIREFKICSEEQLDLTRLIRHFHYTVWPDHGVPETTQSLIQFVRTVR
DYINRTPDTGPTVVHCSAGVGRTGTFIALDRILQQLDSKDTVDIYAAVHDLRLHRVHMVQ
TECQYVYLHQCVRDVLRARKLRSEQENPLFPIYENVNPEYHRAEEQDRWEIV
NT seq
6639 nt
NT seq
+upstream
nt +downstream
nt
atggattctttatttcacgtcctggtttctacctgtcttgccttgacattctcagaaggg
tttctgattatccatgaacagaaacagcagtgtctttcagaaaagagaggagtcattatg
gaaaagtgcaatatgaccaacctcaaccagcaatggcagtggacagcagatgacaggctc
cttcatatgaaatccaaacagtgcctgagcatctctacacgctctgccctgtcatctcgc
agcatcatcgttgattgtccccaggcagtcaggtggacttgccacgaggatgggctcctg
aaggtggccaacagctctctctttctcacaaagcaaggtcagaaggtaatggccaaacag
agtaagaaataccttcatacatggatgcagctagaagccagcgagacgggaaaacctgtt
tatgtaaatctgtgttcaaagcaagatctccaagacacagtgacttctgtaccgagtact
agacctacatcctccactttaaatgctgttacctccagtcctgaaaatctgctaaagagt
agcacagagacgttcatcaggaatgtgactgaacacttcagtaaaaatcttattgaaagc
ctctactttgacttgaaatctgcagtaacagagaagccttggcttccaacaactactttt
caatactctagcactacagaagaggctgcgccgagagaggctgcgggatgcctcgccagc
ctgatggagcgggaggtgagcgggcagagcgtgcggctgcgctggggcgccgcgggtccc
gcctgcaacttcagcgtggccgggagctccgaggacggggaggcggccggctgccagccc
tcccccgcgggcaatggctccttcggctgcaccctgcgaggcctgagcgccgggacgtgg
taccagctccgcatcgagccgctcgccggcggggaggccgtcaacatctccctgcggaca
gatcccttaccaccacctcgttttgaaattaataaggaaaaaactacgctcacaagcttg
caggttcagtgggaccctccctcaggaaaggtggacttgtataacttagtgttatttgat
catgataataaaaagatagaagaagtctccataccaggaagattttcaagaacagaaaat
accttttccagtctcatccctggcaataaatacaagattgtcctcagtgcagttgctgga
aataagagtaccccggaacttcacataagtggatctactgtgccgtcccctgtgaaaaac
gttcaagtcactgtcaagacagacactatccatgcttcgtggtctcctggctctggtcac
gtggatcgttacaagctgatgttactggataatcatgtcctggttcatgagattcaccaa
gaagatcctctgacctcctacactttttcaggacttacagcaggccactcgtataacctc
tctatcataacccaggctgcaggattggagagcagcagttttcaaacagttaggacagcc
ccagctgaagtcctagatttgacagtgacaaatgatgacagcttagatgctttaaaagtt
aagtggagaagacctccaggagacctcagtttctataatatcactctgtctcatcttgga
tcagttaaagaagtcaaaactctacagccactggtcactgagactcactttgacaagctg
actccaggacgtctttatcaggttactgctcgcacaatcagtggtgaactgtttgctgat
cggatggcaactggcaggacatttccccagaaagtttctgagctgaaagcaagtggtggt
ggctggctgaagtctctgcgagtgaactggttgccccctgcgggagactgggagaggtac
cgcctgctcctgtggaaccactcagctctgctgctcaacaccacactggagaaggaggtc
acagaataccttatccacgatttgggcctcatcccggggaggcagtacgacgtggatgtc
attgtggagagcggcgacttgcagagcaagaccagttgcacggggagaacagctccagag
cctgttctccagctccgtgtgaagcatgctaatgaatcttcacttagtgtcatgtggatg
acccctgttgcagaatgggacagctatgtggtttcactgggagatagggatctgactgtc
ataaaaaaagggcttgcaaaagaagctaaggaattcactttcactgacttggtacccgga
agaaagtatacagctaccatcactaccattagtggaattttaagcaactggacttcagtg
gaaggaaggacagtgccagcccaagtgactggtctgaccgtgacaagtcagggatcaacc
aacagcttgttcaccaactggacaagagcgctgggagatgtagattcataccaggtgcta
ctgatacacgagaacgttgtcattaaaaatgagactgttcccagtgaaaccaacagatac
cacttctatcccctgaagcctggtggactctattcagttgttgtcaccactgtcagcgga
gggatatcttcaaggcaaacgatagcagaaggcaggacagttccttccagcgtgactgga
gtaacagtaaataactcaggtcgcagcgactacctcagtgtttcttggctgccggcttct
ggagatgtagacagttatctggtgacactctctcacgatgaccaaattgttcagagcctc
accgtttctaaatccttcagtgaatgttccttcagcagccttactcctgggacgctttac
aatgtgatgataaccactaagagtgggaagtatgaaaattactccttcagccaggaacga
acagtcccttcaagtgttcagggactaactgtcagcaattcagccagaagtgactacttg
aaagtgtcctggttacacgcctctggatattttgatgattatgaagtcgtcatcaaaaac
aacaatgatttcatccaaacaaaaaccatcccaaaggatgaaaatgaatgtgtgttcact
aatctggtcccagggaggcagtacagtgtcacagtcagcacaaggagcgggaaatacgaa
actagtgaaagggtctatggcagaacaatgccagagtcggtgaaagaactgactcttagt
aacagaagcacagaagatctgcaggtaacttggtcaaaggctgagggggacgttgataaa
tatgagattcagctcctcttcaacgatatgaaaatcttcccacctattttccttgggaac
accattgaggagtattggttcacagctttgactccaggacgtctatacaaaattcttgtc
ttgacaatcagtggagatgcacaacgtgctactttcatagaaggcctgacaattccaagt
acggtcagaaacattcatgtatcacctaatggcatgacaaacagcctgaaagtgagctgg
actcctggaagtggagatgttgattcctacacagtgactatatttcagcaaaaccatcag
cttgattcccagagtgtctccaaacatgtctctgagcacacgtttcacaagttggaagct
ggggagcagtaccaggtggtggtgcaatctaacagtggcaccttgcacaacagcttagca
gcttttgggagaacaattccagcccctgtccaggagttattagcccatcatgcttacacc
agtcattccttgttagtaacctggcagaaagctcctggtgtagctgaaagatatgacatt
ctgctcttgaatgagcagggaatcctcctgagcaacaaatcagagccagctacttccaaa
cagcacaaatttgaagatttattagctggcaagaagtataaaatacaagttttgacagtc
agcggtggactcttcagtaaacgagcagaaactgttggtcgaacagttccagcagctgta
acaaatctgaaggtcacagagaacaccactgaccaactgtccttcagctggaccacctca
caaggggagcttgattcatatgacatcttcctatacaacccagacaagtcccttcatgac
aggatttcaggagagcagcagctccagaactgttcattccagaacctgcggcaagggagg
atttatcgaatggtgattgttactcacagtggagacctcactaatgagtcttctgtcttt
ggaagaacagtgccagccccagttgttggtctcaaggcatccaaccgaaacatgacagac
agtctgtggttcacctggggtccagcagcaggagatgttgacttctatgagctgactctt
tacaacccaaatgggacacagaaagaaacatggcacaggaaagacctgaaagagtggcat
ttccaagggcttattcctggcagaaagtacactctggttgtggtgactcacagtggtgac
ctgaccaatacagcaaacgctgaaggaagaacagcacccagccctcccaacactgtatca
tttactgatgttgcaaacacttctttatccatcacttggctgggtcctccagactggacg
gactatgatgattttgaattgcagtggcttccaaaggatcccctcacagtattcaacccc
tacagcagcagcaaatcaaaagtacgcatcatctatggcctgcgaccaggaagactctac
gagttcagcgtcagaacggttagtggtgacagctggaagacatacagtcagtcgcagtct
gcaagtgtgaggacgaaaccagacaagatacaaagtcttcattgtcggccccagacctct
actgccattgcgtgttcctggactcctcctgattctgactttgatgggtatagcgtcgaa
tgcaaaaaaatggacactcgtgaagtggaattctctaaaaggatagaaaaagacaaatct
ctgcttaatatcatgaccctcgttccccacaagcgatacctggtgtccatcaaggtgcat
tctgcagacatgacgagtgaagtagttgaagacagcaccatcacgatgatcgaccgtccc
cctcagccacctccagacatccgagtgaacaaaaaagaggtgctgattaccaaatcctcc
atcaactttacttttaactgcagctggtttagtgatactaatggagctgtgaaatacttt
actgtggttgtgagagaggctgatggtagtgaaggacctaagcctgatgagcagcaccca
ttaccttcctacctggagtacaaacacaatgactctatacacatctaccagacaaattat
tttgccagtaggtgtgctgaaaaccctgacagtgactataaaagctttgacattaagctt
ggaggagaaatggaaaatctgggaggaagatgtgatccagatcagcaaaaattctgcgat
ggacctctaaagcctcggactgcttataggatcagcatacgagcttttacccagctcttc
agtgaggacccaaaggaactccctaaaccactctttgcagacaccttcttctctttaccg
atcactacagaggcagagcctctgtttggagttattgaaggtgtgagtgctggcttgttt
ctgattgtgatgttagtggctgttactgctttaattgtctgcagacaaaaagttggcagt
ggccacgagagaactacaccaaggctgaacattcgcagggataggccactgtcagtccat
ctgaacttggggcaaaaagggaaccggaaaacttccagtccgatcaaagtcagtcatttt
gaagcacacttcaccaaacttcaagcagactccaactacctcctctccaaggagtatgag
gacttgaaagatgtgggtcgaaaccagacatgtgacatagcacttctaccagagaacaga
gggaaaaatcgatacaataatatattgccctacgatacatcaagagtgaagctttccaat
gtggatgatgacccttgctcagactacattaatgcaagctacataccaggcaataatttc
cgcagggaatacatagcgactcagggccctttgcctggcaccaaagatgagttctggaag
atggcatgggagcaaaatgttcacaatattgtcatggtaacccagtgtgttgagaaggga
cgggtgaagtgtgatcactactggccccttgaccaggattccttgtactatggagacttg
attgttgagatgctatctgagtcggtccttccagagtggacgatacgagagtttaaaatc
tgcagtgaagagcagcttgacttaacgaggctcattcgtcacttccactacactgtctgg
ccagatcatggtgtaccagagaccacacagtccctgattcagtttgtcagaactgtaagg
gattatatcaacaggaccccagacacaggaccaactgttgtgcactgcagtgctggtgtt
ggtaggactggcactttcattgcgctggaccgaattctgcagcagctggattcaaaggac
actgttgacatttatgccgcagtacatgacctaaggcttcaccgggttcacatggttcag
acagagtgtcaatatgtgtatctacatcaatgtgtgagagatgtgttaagagccagaaaa
cttcgcagtgaacaagaaaatcccttgtttccaatatatgaaaatgtgaatccggagtat
catagagctgaagaacaggaccgatgggagattgtttaa
DBGET
integrated database retrieval system
