Cuculus canorus (common cuckoo): 104064008
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Entry
104064008 CDS
T08597
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X2
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03022
Basal transcription factors
cuca03420
Nucleotide excision repair
cuca04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104064008 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
104064008 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104064008 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cuca01001
]
104064008 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104064008 (CDK7)
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104064008 (CDK7)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104064008 (CDK7)
Enzymes [BR:
cuca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
104064008 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
104064008 (CDK7)
Protein kinases [BR:
cuca01001
]
Serine/threonine kinases: CMGC group
CDK family
104064008 (CDK7)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104064008 (CDK7)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
104064008 (CDK7)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104064008 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Haspin_kinase
RIO1
APH
FTA2
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
104064008
NCBI-ProteinID:
XP_009564590
UniProt:
A0A091GCQ4
LinkDB
All DBs
Position
Z:13514598..13537574
Genome browser
AA seq
343 aa
AA seq
DB search
MDARARAKRYEKIDFLGEGQFATVYKAKDKNDNRIVAIKKIKLGHRSEAKDGINRTALRE
IKLLQELSHANIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSIVLTQSHIKAYMLMTL
QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPE
LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPSEEQWPGMTS
LPDYVTFKSFPGMPLQHIFSAAGDDLLSLLQGLFTFNPCTRFTATQALKEKYFSNRPGPT
PGNQLPRPNCPAEALKEQQNALFNLKRKRTDGVDQGLPKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcgggcccgcgccaagcgctacgagaagatcgacttcttgggggaggggcag
tttgccaccgtctataaggcgaaggacaagaacgacaaccggatcgtggccatcaaaaag
attaaactgggacatagatcagaagctaaagacggaatcaacagaacagccctcagggag
ataaaattgttacaggaactaagccatgcaaatattattggtcttctagatgcatttgga
cacaagtccaatattagtttggtgtttgattttatggagacagatcttgaggttattata
aaggatactagtattgtgctgacacaatctcacatcaaggcatatatgctgatgacactt
caaggattagagtatttacatcaacactggattctacacagggaccttaaaccaaataat
ttgttgttagatgaaaatggagttttaaaattggctgactttggcttagcaaaatctttt
ggaagcccaaatagagtttatacacatcaggtagtaacaaggtggtaccgagccccagaa
ctattgtttggtgctagaatgtatggtgttggtgttgatatgtgggctgttggttgtatt
ttggctgaattgctcctcagggttccttttttgcctggagactcggatcttgaccagctg
acgaggatatttgaaacactgggcactccatcagaagaacagtggcctgggatgacaagt
cttccagattatgtcacatttaagtctttccctggaatgccacttcaacatatcttcagt
gcagctggtgatgatttgctgagtcttctgcaaggcttattcacatttaatccttgtact
aggtttacagctactcaggcattgaaagagaagtatttcagtaacagaccaggacccact
ccaggaaatcagctgccaagacccaactgtcctgcagaagctctaaaggagcaacaaaat
gcacttttcaatttaaaaaggaaaagaacagacggagtagatcaaggattaccaaaaaaa
ctgattttttga
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