Cuculus canorus (common cuckoo): 104064042
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Entry
104064042 CDS
T08597
Symbol
TBC1D8B
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104064042 (TBC1D8B)
Membrane trafficking [BR:
cuca04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104064042 (TBC1D8B)
Endosome - Golgi transport
Rab GTPases and associated proteins
104064042 (TBC1D8B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
104064042
NCBI-ProteinID:
XP_053931321
LinkDB
All DBs
Position
10:complement(14021344..14058229)
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AA seq
1125 aa
AA seq
DB search
MWLKPEEVLLKNALKLWVQERSNQYFVLQRRRGYGEAGGGGLAGLLVGTLDAVLDSTSKV
APFRILHQTPDSQVYWSIACGSSREEITKHWDWLEHNVMNTLSVFDSNEDITSFVQGKIR
GLIAEEGKGSFVKEDDPEKFREGFMKFEKCFGLPEQEKLVTYYSCSYWKGRVPCQGWLYL
STNFLSFYSFLLGAEVKLIISWDEISKLEKTSNVILTESIHVCAHGEDHYFSMFLHINET
FLLMEQLANYAVRRLFDKETFKNDLVLHDPLQITKRGLENRAHSEQFSAFFRLPKEETLK
EVHECFLWIPFSHYNTHGKMCISENYICFASQDGSLCSVIIPLREVTGVDKADPANRGVS
ISTKGKTAFRFTEVRDFEQLVAKLRMKCNAASSPQHIINTEGAAGSASDSPRDFDAGPSK
MDQRDNSKTVVTEALMTVYHPQDAENLDSKMLKEKMKEQSWNIHFVERGHGVSMFRTKKT
RDLVVRGIPEALRGELWLLFSGAVNDMASNPGYYTELVEKSLGTCTLATDEIERDLRRSL
PEHPAFQSDTGISALRRVLTAYAYRNPQIGYCQAMNILTSVLLLYAKEEEAFWLLVAVCE
RMLPDYFNRRIIGALVDQAVFEELIRVHLPQLTDHMTDMTFFSSVSLSWFLTLFISVLPI
ESAVNVVDCFFYDGIKAILQLGLAVLEYNMEKLLTCKDDAEAVTVLNRFFDSVTNKDSPL
PPAVQQGSNLSDTKSDHPKVDITDLIRESNERYGDIRYEDVESMRCRNRLSVIQILEATT
KQNVLRVVSQDVKFSPSDLEELYELFKKEHFLSCYWNVNSPALQHHDASLPYLDQYRIDC
QQFRVLCHLLSPWSHCANRDSLALWTFRLLDEDSDRLINFKQFACVLDTMYNGSFTDKLK
LLFKLHIPPAFTEVESLSPSKEGDLSKEELIQFSQLSVSSVGDSLESDPLKSSPEKGKGK
VDIQAYLKQWQDELLKKEENIKDLPRMNQSQFIQFSKTLYDLFHGDPEEEQLYRAIAVVT
SLLLKMEEVGRRLQNPTSPVKSSVAVTEVPAEIPNEGQEESSSEQLEGSRAQSLRGNHEW
SFAFEQILASLLNEPAFVRFFEKPHDIKLKIESAKNLQLKARTRM
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaagcccgaggaggtgctgctcaaaaatgccctcaagctatgggtgcaggag
cgctccaaccagtacttcgtgctgcagcggcggcggggctacggcgaggcgggcggcggc
gggctggcaggtcttctcgtgggaacattagatgcggtgttggattctacatcgaaagtc
gccccatttcgcatcctgcatcagacaccagactctcaagtctactggtccattgcgtgc
ggatccagcagagaagaaataacaaaacactgggactggttagaacacaatgttatgaat
actttatcggtatttgattcaaatgaagatattacgagctttgtccaggggaagataaga
ggtttgattgctgaagaggggaaaggttcttttgtaaaagaggatgatcctgagaagttt
cgtgaaggttttatgaagtttgaaaagtgttttggattgccagaacaggagaagttggtt
acctattactcatgcagttattggaaaggcagagtaccttgtcaaggatggctttatctt
agtaccaatttccttagcttttactcatttttgctgggagcagaagtaaaacttattatc
tcctgggatgaaatatcgaaacttgagaagacttccaatgtgattttgacagagagcatt
catgtgtgcgcccatggggaagatcactatttttccatgtttttgcacattaatgaaaca
ttccttcttatggaacagctggcaaactatgctgttaggagactttttgacaaggagaca
ttcaaaaatgacttagttcttcatgaccctctgcagataaccaagagaggcctagagaac
cgtgcccacagtgagcagttcagtgcgttcttcaggctacccaaagaagagaccttgaag
gaagttcacgagtgcttcttatggattcctttcagtcattacaacacccatgggaaaatg
tgcatttcagaaaactacatctgcttcgctagccaggatggcagcctgtgcagtgtaatc
attccactgagagaggtcacaggggtggataaggcagatccggccaacagaggagtcagc
attagtactaaaggaaaaacagcttttcgtttcacggaggttagagattttgaacagctt
gtggcaaagctcagaatgaaatgcaatgcagcttcaagtccacaacacatcataaataca
gagggtgcagctggttctgcctctgacagtcccagggattttgatgcaggaccatcaaaa
atggatcagagagataacagcaaaactgttgttacagaagccctaatgactgtctaccat
ccacaggatgctgaaaatctagactctaaaatgttaaaagaaaaaatgaaagaacagtcc
tggaacatccactttgttgaacggggacatggtgtcagcatgtttagaacaaagaagact
cgagacctagttgtaagagggatcccagaggcattaagaggagagctctggctactcttc
tcaggtgctgtaaatgacatggcatccaaccctggttattacactgaattggtggaaaag
tccttaggaacctgcactttggctactgatgaaattgaacgagatttacgtcgctcctta
cctgagcatcctgcttttcaaagtgacacaggaatttctgcactcaggagagttcttaca
gcttatgcatacaggaatccccaaattggatattgtcaggcaatgaatattttgacatca
gtactcctgctgtatgctaaagaggaggaagcattctggcttttggttgctgtgtgtgaa
aggatgctacctgattatttcaatcgtcgaatcattggtgccttggtagatcaggcagtg
tttgaggagctcatcagggttcatctgcctcagttgacagaccacatgacggatatgact
tttttctcctcggtctctctctcctggttccttaccctttttatcagtgtgctgcctatt
gaaagtgcagtcaatgtggtggactgtttcttctatgatggaataaaggcaatcttgcag
cttggtctcgcagtgctggaatacaacatggagaagttgctgacttgtaaggatgatgca
gaagctgtcactgttctcaacagattctttgacagtgtcactaacaaagacagtcctttg
cctccagctgtgcagcagggctccaacctcagcgatacaaagagtgaccatccaaaagtg
gacattactgatttgatccgagaatcaaatgaaagatatggcgatattcgctacgaggat
gttgagagcatgcgctgcaggaacaggctttctgtgatccagatattagaagctacaacc
aagcagaatgtgctacgtgttgtgtcccaggatgtaaaattcagtcctagtgatcttgaa
gagctttatgaattattcaagaaggagcactttctttcctgttattggaatgtaaacagt
cctgccttgcagcatcatgatgccagtctgccgtatcttgaccagtatcggattgattgc
caacaattcagggttctctgtcatctcttgagtccttggtcgcactgtgcaaacagagac
tcgcttgcattgtggacattcagactgttggatgaggactccgatcgccttataaatttc
aaacaatttgcctgcgttcttgataccatgtataatggaagtttcactgacaaactcaag
cttctttttaagttgcacattcctccagcttttacagaagtagaatctctaagcccttcc
aaagagggtgatctttcaaaagaagaactgatccagttcagccaactcagtgtttcatct
gttggggatagtcttgaaagtgatcctttgaaaagcagcccagaaaaagggaaggggaag
gttgacattcaggcgtatctgaagcaatggcaagatgaacttcttaaaaaagaagaaaac
attaaggatttgccaagaatgaatcagtctcagttcatccagttctcaaaaactctgtac
gatctgttccatggggatcctgaggaggaacagttatatcgggctatagcggtggttacc
agcctcctgctgaaaatggaagaagttgggagaagactgcagaatcccacatcgccagtc
aaaagttcagttgctgttacagaagtgcctgctgaaatccctaacgaagggcaggaggaa
agcagctctgagcagcttgaaggcagcagagcacagagtttgagagggaaccatgaatgg
tcttttgcctttgaacagatcctggcatccttattaaatgagccagcctttgtgagattt
tttgagaaacctcatgacataaaacttaaaatagagagtgctaaaaatttacagcttaaa
gcaagaaccagaatgtaa
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