Cuculus canorus (common cuckoo): 104064138
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Entry
104064138 CDS
T08597
Symbol
RSF1
Name
(RefSeq) LOW QUALITY PROTEIN: remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104064138 (RSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104064138 (RSF1)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
104064138 (RSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
Motif
Other DBs
NCBI-GeneID:
104064138
NCBI-ProteinID:
XP_053921105
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All DBs
Position
1:complement(17608524..17673642)
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AA seq
1462 aa
AA seq
DB search
MATAAAPPAPSPPAPPPAGPCCPGSWPNFAVVCSFLERYGALLDLPELPFPELERVLQPP
QEPGEQVPKELVELHLKLMRKIGKSVTADRWEKYLIKICQEFNSTWAWEMEKKGYLEMSV
ECKLGILKYLCECQFDDNLKFKNIINEEDADAMRLQPIGRDKDGLMYWYQLDQEHNVRMY
IEEQDDQDGSTWKCIVRNRNELAETLELLKAQIDPALLKPNNSQQENSSCESPSVEDEDT
KKGEEASTQENQLKIKEEKEEAEEQSVELESLLPPVVREDENVVKTENAEEKEIIKLPVI
VKLEKPSEYNEEKQTIKEESDSFKENVKPVKAEVKENKIESKDLKEVKSCTDKIVGHEPE
RLEFCVNVKTPQDSVEKTVEESEKLKNDQQAKIPLKKREIKLTDDYDSPIKGPLCKCVTP
TKDVLKEEGKPEEEAFKRVPTITALCPDGKVLVNGEVSCEKITPSVIQNNKSEHSASTKE
ESSSLKERNGKSGEKTSDSLNSVSKIIKTCEAEKNAVTVVKETGAVISEVSSQKVPLKEE
SSPVEKDSLDSTTTEMVVEESSNSEDCDKTEDKVAMKIKKDRLPPPKECLEMLEKSTNAS
APAELPKLALSDEDTSKSKGEPEAKPDSQKNAEVPPASPSPTTLEKPVLEKKGSDTKMAL
PEESKVEEKSSCEKQEEEIEAAKTEPDQSDDALASSLEDSSENKKELPLAKSKFKYKLVS
EGESCATDNKEITSERQKEGIKLTIRISSRKRKAETPPEEVSVGRTLRRSPRISKPTPKV
VETRDQKPDKKRPEEEEEKPAAAQKTERKEDAKKQEKEANSKVNKRSKVRWTGTRTRGRW
KYSSNEESEDSGSEKNSDEEEEEEEEEEEAAPADDDEPCKKCGLPNHPELILLCDSCDSG
YHTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDLDVVLKKKERAERRKERLVYVG
ISIENIIPPQEPEIPEGQEEKKKDSKKPKSKLLERRSTRTRKCISYRFDEFDEAIDEAIE
DDIKEADGGGIGRGKDMSNITGHRGKDISTILEEERKENKRPQRAAAARRKKRRRLNDLD
SDSNLDEEESEDEFKISDGSQDEFVISEENLDESEDDPPSNEDSDSEFCARISRRHLSRP
MRQSRRLRRKTVKKKYSEDDEDEDSEDNSSRESESGYTDYSDDDYLETRRRRSRRNQKRQ
VNYKEDSESDGSQKSVRYGKELRRVHKRRLSTSDSEVYTSKNSEDDESTKESKRLIRKRR
RSTDDYSEEEGXDEEDEGRPVRKRLNRXETDEEDNCENANDDAENPTPANKLPAPQAPQD
NAKKHCYRIESDDEDDFDNVGKVESPLDYSLVDLPSTNGQSPGKTIENLIXKPSEKTQXP
KDSTASASLAPNGXGGGQEAVGPEEIEDELLRVTDLVDYVGNVNSYKTSIFVANLFHGSS
YQRASIKSCFIFLENSPLQYHF
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcggctcctccggctccatccccgcccgccccaccgccggcggggccc
tgctgcccgggctcctggcccaacttcgccgtcgtctgctccttcctcgaacgctacggg
gccttgctggacctgcccgagctgccctttcccgagctggagcgcgtcctgcagccgccg
caggagcccggagagcaggttccaaaagaattggtggagcttcacttgaaactgatgaga
aagattgggaaatctgtcacggcagacagatgggaaaaatatttgatcaagatatgtcaa
gaattcaacagcacttgggcttgggagatggaaaaaaaaggatacctagaaatgagtgtt
gaatgcaaactggggattctgaagtatctctgtgaatgtcagtttgatgacaatctaaag
ttcaagaatataattaatgaggaggatgccgatgccatgcgtcttcagcccattggtcga
gacaaggatggcctgatgtattggtatcagctggatcaagagcataatgtcaggatgtac
atagaagagcaggatgaccaggatggatccacatggaagtgcattgttagaaaccgcaat
gagcttgccgagacccttgagctcttgaaagcacaaattgatcctgccctgttgaaaccc
aacaattctcagcaggagaattcatcatgtgaaagcccaagcgtagaagatgaagacacc
aaaaagggtgaagaagcatcgacacaagaaaatcaattaaaaatcaaagaagaaaaagag
gaggcggaggaacagtcagtggaattggaaagccttcttcctcctgtggtcagagaagac
gaaaatgtggtgaaaactgagaacgcggaagaaaaagaaattataaaattgccagtaatt
gtaaaattagagaaaccttcagaatacaatgaagaaaagcaaactatcaaagaagaaagt
gactcctttaaggaaaacgtcaagcctgttaaagcagaggttaaggaaaacaaaatagaa
tcaaaagacttaaaagaagtaaaaagttgtacagacaaaatagtgggtcatgaaccagag
aggttagaattttgtgttaatgtcaaaactccccaagacagcgtggagaaaactgtggaa
gaaagcgagaaacttaagaatgaccagcaggcaaaaataccgcttaagaagcgagagatc
aagctgacggatgactatgacagtccgataaagggtcccctgtgtaaatgtgttactcca
acaaaggatgtcttgaaggaagaagggaaaccagaagaagaggcttttaagagagtccct
acaattactgccttatgtcctgatgggaaagtgctagtaaatggagaagttagctgtgaa
aaaataaccccaagtgtcatacaaaataataagtcagagcattctgctagcacaaaggaa
gaaagcagctcattaaaagagagaaatgggaaaagtggagaaaagacatcagactccctg
aattctgttagtaaaattataaaaacttgtgaggctgagaagaatgcagtgactgtggtg
aaagagacaggggctgtgatctctgaagtttcaagtcagaaagtgcctttaaaggaggaa
tctagtcctgtggaaaaagactcccttgacagcacaactactgaaatggtagtagaagag
tcttcaaattctgaagactgtgataaaactgaagataaagtagccatgaaaatcaaaaag
gacagactaccgccacccaaagaatgcttagagatgctagagaagtccacaaatgcatct
gctcctgcagaactacccaagcttgcactgtctgatgaagacacttcgaaaagtaaaggg
gagcctgaggcaaaacctgactctcaaaaaaatgctgaggtcccccctgcgtcgccttct
cccactactttggagaagccagttttggaaaagaagggctctgatactaaaatggctcta
ccagaggagagcaaagtagaagaaaaatccagctgtgaaaaacaagaggaagagattgaa
gctgccaagacggagccagatcaatcagatgatgcccttgcttctagtctagaggactct
tcagagaataaaaaggaattgccactagctaaaagcaaatttaaatataagctagtttct
gaaggagaaagctgtgcaacagataataaagaaataacttctgaaagacagaaagaagga
attaaattaacaatcaggatctccagtcggaagagaaaggcagaaacgccaccagaagag
gtcagcgttggccgcacattaaggcgatctccaagaatatccaagcctactccaaaagtt
gtggagactcgggatcagaaacctgacaaaaagcgacctgaagaggaagaggagaaacct
gcagcagcacaaaaaacagaacgaaaagaagatgcaaaaaaacaagagaaggaggcaaat
tctaaggttaacaagagaagcaaagttcggtggacgggtacgcgaacacgtggcaggtgg
aaatactcaagtaatgaagaaagtgaagactcagggagtgaaaaaaactctgatgaggag
gaagaggaagaagaggaagaagaagaagctgcacctgctgatgacgatgagccgtgcaag
aagtgtggccttcccaatcaccctgaactgattttgttgtgtgactcctgtgacagtggg
taccacacagcctgccttcgccctcctttgatgataatccctgatggagagtggttctgc
ccaccttgccagcataaattactctgtgagaaattagaagaacaattacaagatctggat
gttgtcttaaaaaagaaggaacgtgcagaacgcagaaaagagcgtttggtgtatgtgggt
atcagtattgagaacatcattccacctcaggagccagaaatacctgaaggtcaggaagaa
aagaagaaagattccaaaaagccaaaatcaaagctgcttgaaaggagatctaccagaacc
cgaaagtgcataagctacaggtttgatgaatttgatgaagcaattgatgaggcaattgaa
gatgatatcaaggaggctgatggaggaggcattggcagaggcaaagacatgtctaatatc
acaggtcaccgtggaaaagacatttccacaatcctagaggaagaaagaaaagaaaacaag
cgaccgcaaagggctgctgcagcacgacgcaagaaacgacggcgactaaatgacttggac
agtgatagtaacctggatgaagaagagagtgaggatgaattcaagatcagtgatggatct
caggatgagtttgttatatcagaggaaaatctggatgaaagtgaagatgacccaccatca
aacgaagacagtgattcagagttctgtgcccgcatatccaggcgacacttgtccaggccc
atgaggcaaagcaggcggttacgaaggaaaacagtcaagaaaaaatactcagaagatgat
gaagatgaagattctgaagacaattcaagcagagaatctgagagtggttacacagattac
agtgatgatgattacctggaaactaggaggagaaggtcaagacggaatcagaagagacaa
gttaattataaggaagattcagaaagtgatggctcacagaaaagtgtccgatatgggaag
gagttaagaagagttcataaacgcaggctctccacttcagatagtgaagtttacacatca
aagaactctgaagatgatgaatccacaaaggagtcaaagcgattgattagaaaacgtcgt
cgaagtacagacgactactctgaagaagaaggangagatgaagaagatgaggggaggcct
gtccgcaaacggctgaatcganacgaaacagatgaagaagataactgcgaaaatgctaat
gacgatgcagaaaaccccactcctgcaaataagctgccagcaccacaagctcctcaagac
aatgccaagaagcactgttaccggatagaaagcgatgatgaagatgactttgataacgta
gggaaagtagagagccctttggactacagcctggtggatttgccttccaccaatggacag
agcccaggtaaaaccattgagaacttgattngcaagccaagtgagaagacccagngcccc
aaggacagcacagccagcgccagcctggcacctaatggancgggtggtgggcaggaagca
gtagggccagaggagattgaagatgaacttttgagagtgactgaccttgttgattacgtc
ggtaacgtgaacagttataagacttccatttttgtggctaatttattccacggtagctca
taccagcgggccagtattaaaagctgttttatttttctagaaaattctccactacagtat
cacttttag
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