Cuculus canorus (common cuckoo): 104064178
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Entry
104064178 CDS
T08597
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104064178 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104064178 (PDS5B)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104064178 (PDS5B)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
104064178 (PDS5B)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
104064178 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
104064178
NCBI-ProteinID:
XP_053930813
LinkDB
All DBs
Position
1:23823497..23926582
Genome browser
AA seq
1448 aa
AA seq
DB search
MAHSKTRANDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYS
LQSEAGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYL
YATLDSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNFEHLITPLVTIGHIAMLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGNAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQIFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDIKEC
LWFILEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDPKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARYFTQPDKNFSNTKNYLPPEMKSFFTPGKPKAANVLGAVNKPLSS
AGKQSQSKSSRMETVSNASSSSNPSSPGRIKGRLDSTEMDHSENEEFTLTSPLPGKKTDK
RDDSDLVRSEMEKPRGRKKAAITDSEEKLNIDDLNKLGQEQKLRGSQRGKKRPAVVSESD
ETQWQEEKRLKEDVIESEDEQNSPPKKGRRGRPPKTNNGATPKEEPVAKSTKRSKKKQPP
AAAAEEEEEEEERQTENIEQKPKGRQNRTQKRTQQRAEPSETSTVESAQSTPQKRRGRRS
KTPPSQPKKVRAGRSKQAASKENESSEEMDVFQSNSPVSDDIPQEEAMEEEEVSTINVRR
RTSKRERR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacgagagccaatgatggaaaaatcacatatcctccaggagtcaaa
gaaatctctgataaaatatctaaagaagagatggtgagaaggctaaagatggttgtcaaa
actttcatggatatggaccaggactctgaagaagaaaaggagctctacctaaatcttgct
ttacatcttgcttcagattttttcctcaaacatcctgataaggatgtacgtttgttggta
gcatgttgtcttgctgatattttcagaatttatgcccctgaagctccatacacttcccca
gataaactaaaggatatatttatgttcataacaaggcaacttaagggtttagaagataca
aaaagcccccagtttaatcgatatttttatttgcttgagaatattgcttgggtcaagtct
tataacatatgctttgaattagaagacagcaatgagatttttacacagttgtacagaacg
ctcttttcagtaataaacaacggtcataaccaaaaagtgcacatgcacatggttgatctg
atgagctctatcatttgtgagggagatactgtgtcacaggaacttttggatacagtgtta
gttaatctagtgccagcacataagaatttaaacaagcaagcctatgatttagcaaaggct
ttactaaagaggacagcacaagcaattgaaccatacattactaatttcttcaatcaagtc
ctcatgcttggtaaaacatctattagtgacctgtcagagcacgtgtttgacttgattctg
gagttatacaatatagacagtcacctcttgctttctgttctgccacagcttgaattcaaa
cttaagagcaatgacaatgaagaacggctgcaggttgtaaaacttctagcaaaaatgttt
ggggccaaggattcagagttggcatctcaaaacaaaccgctttggcagtgctacttgggg
aggttcaatgatatccatgttcctattcgtcttgaatgtgtgaaatttgcaagtcactgc
cttatgaaccatcccgacctagcaaaagatttaacagaatatcttaaagtgaggtcacat
gatcctgaagaggccataaggcacgatgttatagtatctatagttactgctgctaaaaaa
gaccttttgcttgtcaatgatcatctgcttaattttgtcagagaacgaactctggacaag
cggtggagagtaaggaaagaagctatgatgggactcgcacagatatacaagaaatattcg
ttacagtcagaagcaggaaaagaagctgcaaaacagatatcgtggataaaagataaactt
ctacatatatattatcaaaacagtattgatgaccgattacttgtggaacgcatctttgct
cagtacatggtccctcacaacttggaaacaaatgaacgaatgaaatgtttatattacctt
tatgcaacactggattcaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctacgacatcaagtaaaggatttagttgacctaataaaacaacccaaaacagatgcc
agcagtaaggctatattctcaaaagtgatggttataacaaggaaccttcctgatccaggg
aaagctcaagatttcatgaaaaagttcacacaagttctggaagacgatgaaaaaataaga
agtcagttagaaatgcttgttagcccaacgtgttcttgcaaacaggccgaaggatgtgtg
agagaaataacaaagaagttgggtaatccaaaacagccaacaaatcctttcctggaaatg
ataaagtttcttcttgagagaattgctcctgtgcacattgatactgaatctatcagtgcc
cttatcaagcaagtaaacaagtctatagatggaacagctgatgatgaagatgagggtgta
cctactgaccaggcgatcagagcaggtcttgaattgcttaaggtactttcatttacgcac
ccaatctcatttcattcagctgaaacttttgaatctcttctggcttgcttgaaaatggat
gatgaaaaagtggcagaagctgcattacaaattttcaaaaatacaggaagtaaaattgaa
gaagactttcctcatatacgatctgctttgcttccagtgttgcatcataaagctaaaaag
ggacctcctcgtcaagccaagtatgctattcactgcatccatgcaatattttccagtaaa
gaaacacagtttgcacagatatttgagccactgcataagagcctggatccaagcaatttt
gagcatcttattacgccgttggttactattggccatatagctatgctagcacctgatcaa
tttgctgcccctttgaaatctttggttgccacttttattgttaaagatttgctaatgaat
gataggcttccaggaaaaaagacaacaaaactttgggtcccagatgaagaggtgtctcct
gaaacgcttgttaaaattcaggccatcaagatgatggttcgatggttactaggaatgaag
aacaaccacagcaagtcaggaacttctactctgaggttgctaacaacaatattgcacagt
gatggagatttaacagagcaggggaaaattagtaaacccgacatgtctcggttgaggctg
gctgcagggaatgctattgtgaagttggcacaagaaccttgttaccatgaaatcatcacc
ttagaacagtaccagctgtgtgcactagccataaatgatgaatgttaccaagtgagacaa
atatttgctcagaaacttcacaaaggcctttccaggctacggctgccactagaatatatg
gctatttgtgcactgtgtgcaaaagatccggtgaaggagagaagagctcatgctaggcag
tgccttgtgaagaacataaatgtcagaagggagtatctgaagcaacatgcagcagttagt
gagaaactgttgtcactcttgccagagtatgttgttccttatactatccatcttctagct
catgacccagattatgtcaaagtccaggacattgaacaactcaaggacattaaagagtgc
ctgtggttcatattggaaatattgatggctaaaaatgaaaacaacagtcacgcctttatc
agaaaaatggtagaaaatatcaaacagactaaggatgctcaaggaccagatgatccaaaa
atgaatgaaaaactatacacagtctgtgatgtagcaatgaatatcattatgtcaaagagt
acgacatacagtttggaatcccctaaagaccctgtacttccagccagatattttactcaa
cctgacaagaatttcagtaacaccaaaaactatcttcctccggaaatgaagtcttttttc
actcctggaaagcccaaagcagccaatgttcttggagcagttaataagcctctttcatca
gcaggcaagcagtctcaatccaaatcttcacgaatggaaactgtaagcaatgccagcagc
agttcaaatccaagctctccaggaaggatcaaagggagacttgacagtactgaaatggac
cacagtgaaaatgaagaattcacactgacttcacccttaccagggaagaaaaccgacaaa
agggacgactctgatcttgtaaggtcagagatggagaagcctagaggaaggaagaaagca
gctatcacagattcagaagagaaattaaacatagatgacctgaataaactgggtcaagag
cagaaacttagaggtagtcagcggggaaagaagagacctgcagttgtttcagaatctgat
gaaacacaatggcaagaggaaaaaaggctaaaagaagatgtaatagaaagtgaggatgaa
cagaacagtccaccaaagaaagggagaagaggacgccctcccaaaacaaataatggggca
acaccaaaggaagaaccagtggcaaagtcaacaaaaaggagcaaaaaaaaacaaccgcca
gcagctgcagcagaagaggaggaggaggaggaagaacggcaaactgaaaacattgaacaa
aaaccaaaaggcaggcaaaataggacacagaaaagaacacagcagagagcagaaccatct
gaaactagtacagttgaatcagcccagtctacgccccagaaaagacgaggaaggcgatca
aaaacaccaccatcacagccaaaaaaagtccgtgcaggacgttccaaacaagcagccagt
aaagagaatgaatccagtgaagagatggatgtatttcagagtaattcacctgtcagcgat
gacattccccaggaggaagcaatggaagaagaagaagtttccacaatcaatgtccgtcgc
agaacttctaaaagggaaaggcgatga
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integrated database retrieval system
