Cuculus canorus (common cuckoo): 104064203
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Entry
104064203 CDS
T08597
Symbol
RNF169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104064203 (RNF169)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104064203 (RNF169)
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
104064203 (RNF169)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
104064203 (RNF169)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
104064203 (RNF169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
Prok-RING_4
zf-RING_2
zf-RING_5
Siva
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
104064203
NCBI-ProteinID:
XP_053924407
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All DBs
Position
1:15139754..15166793
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AA seq
646 aa
AA seq
DB search
MAAAGPGGRAAVQGRRRGRPGAEEAECSVCRQALAEAVTPPCRHSLCLACFQRCLQGPGL
CCPLCRTRLSTWARRHRAEPAATTAAGAGGEQRPPEQDFIFRAPIKLSKPGELREEYESQ
LRKLKDEKLQEEKASEDLIHKFVLDDMEVGKRKMEEQQKKDESLVLKVNQDCFPERLSDS
ENEEPFQGKPTHRSAFVSKTSAYSFAFLSGNLTAKVERSRSCNDTIQERSKSRQRSAPAN
KTKVPPVTSTSAPLAGVLSCTQNNRCLSAPDLTAEKRLVLNPVSSLSTLHKPERSISPES
NDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKPTTYEASPRIL
KKWEQIFQERQIKKTLSKATLTSLALEPGEDIIVPDITNSSTYTKEQPQMQDDHLPPDTT
GDPRPELDFFPSISEIKLGKGSERNRDLQALTADDSAAEPGARSNVTSLNTRVSEVPDLK
VNTIMDKSCFSLGPKMLNRRLMGVGASLPDNNTLGVPIKTSGKKQLKYLNNSELINVQNS
TCNSVENIIGEQPPSLRRGRKRRCKTKHLEHNGSVKRLRHTAGEVGLPPEERLVREMEQK
LQQEEEDRRLALHLQRIFDSENRTVDRRKVRVDRYLLRSKSTLGAK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggggcccggcgggcgagccgcggtgcaggggcggcggcggggccggccc
ggggcggaggaggcggagtgctcggtgtgccggcaggcgctggcggaggcggtgacgccg
ccctgccggcactcgctctgcctcgcttgcttccagcgctgcctgcagggcccgggcctc
tgctgcccgctctgccgcacccgcctctccacctgggcccgacgacaccgcgccgagccc
gccgccaccacggccgccggagcaggcggagagcagcggccgccggaacaagactttata
ttcagagcacccattaagttaagcaaaccaggggaactccgagaagaatatgaaagccag
ctaaggaagctgaaagatgaaaaactacaagaagaaaaagcttctgaggatctgattcac
aagttcgttctagatgacatggaagtgggaaaaagaaaaatggaagaacagcagaaaaaa
gatgaatctttagttcttaaagtgaaccaagattgttttcctgaacgtctctcggattca
gagaatgaagaaccattccagggcaagccaacacatcggtcagcttttgtttctaagacc
agtgcctactcctttgctttcctttcagggaacctaaccgccaaggtggaaaggagtcga
agctgcaacgacaccattcaggagagatcaaagagcaggcagagatcagccccagccaac
aaaacaaaggtaccacctgttaccagcacatcagcgccactggctggagttctgtcatgc
acccaaaacaaccgctgcctctctgccccagacctgacagcagagaaacgccttgttctc
aatcccgtttcatccctgtcgaccctgcacaagccagagagatctatcagtcccgagagc
aatgacagcatctcggaagagctcaaccatttcaagcctatcgtctgctccccatgtact
cctccaaagaggcttcctgatggcagagtgctgagccctctcattataaagtccacccca
agaaacctgaaccggagcctgcagaagccgaccacctatgaggccagtcctagaatactg
aaaaaatgggagcagatatttcaggagcgccagatcaaaaagactctctctaaagcgacc
cttacgtccttggctttggagcccggagaagacatcatagttcctgacatcaccaactcc
agcacttacacgaaagagcagccgcaaatgcaagatgatcaccttccacctgacacaaca
ggagaccctcgccctgaactggatttcttcccttccatcagtgaaattaagctagggaaa
gggagtgagaggaacagagatttgcaggccttaacagcagatgacagtgctgctgaacca
ggtgcaagatcaaacgtcacctccctaaacacacgagtgtccgaagtccctgacctaaaa
gtgaacacgatcatggacaaatcctgttttagtcttggcccgaaaatgctgaacagaaga
ctgatgggtgttggtgcatccctgcctgacaacaacacactaggagtccccatcaagaca
tcaggaaaaaagcagttgaaatacctgaacaacagcgaattgatcaatgtacagaacagc
acctgcaattccgttgagaacatcatcggggaacaacccccgtcgctgagacggggccgg
aagagacgctgcaaaacaaagcacttggagcacaatggctctgtcaaaagacttaggcac
acagccggggaggtgggcttgcctccggaggagcgcttggtacgggagatggagcagaag
ctccagcaagaggaggaggacaggaggctggccctgcatctacaacggattttcgacagc
gagaataggacagtggataggcggaaagtcagagtcgatcggtatctgctgcggtcgaag
agcactctaggtgctaagtag
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