Cuculus canorus (common cuckoo): 104064258
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Entry
104064258 CDS
T08597
Symbol
PDS5A
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104064258 (PDS5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104064258 (PDS5A)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104064258 (PDS5A)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
104064258 (PDS5A)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
104064258 (PDS5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
EnP1_C
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
104064258
NCBI-ProteinID:
XP_053921190
LinkDB
All DBs
Position
4:complement(25437034..25522191)
Genome browser
AA seq
1356 aa
AA seq
DB search
MLRLPEPRERPVEECAEGKFVTGSARMDFPAAQPKPAADGKIIFYPPGVKEITDKITNDE
VVKRLKMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRI
YAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDC
NEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNL
NKQAFDLAKVLLKRTVQTIEPCIANFFNQVLVLGKSSVSDLSEHVFDLIQELFAIDPHLL
LSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVR
LESVKFASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVTIITAGKRDLSLVNDQLL
GFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHAEAGKDAAEKVSWIKDKLLHIYYQNSID
DKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELL
DLHKQPTSEANSAAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPT
CSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIE
GTADDEEEGVSPDTAIRAGLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQ
IFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQLAQIFEP
LSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGK
LWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRI
SKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKAL
VKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMANEKLLSLLPEY
VVPYMIHLLAHDPDFTKPQDVDQLRDVKECLWFMLEVLMTKNENNSHAFMKKMAENIKLT
RDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPKDPVLPTKFFTQPEKDFCNDRN
YISEETRVLLLTGKPKPTGVLGTVNKPLSAAGRRPYIRTTGSETGSNISVNSELSSSAGN
RSREQSSDISETGVSENDENPVRIISVTPAKTEPVKNKEINSDQATQGNSTERGKKRTAT
AAGTENIHQKPEEKNVDETGPSLAAKTRRGRLLKPEPQGTTAKNEEANKQPVRGRKRAAG
SQESPGSLEAGNAKAPKQQDTAKKPAAAQRQIDLQR
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccttccggagccgcgtgagaggccggtagaggagtgcgcagaaggaaagttt
gtcaccggtagcgccagaatggacttccctgctgcccaaccaaaacctgctgccgacggg
aaaatcatcttctaccctccgggagtgaaggagatcaccgacaaaatcaccaacgatgaa
gtggttaaacggttaaagatggtggtaaaaaccttcatggatatggaccaggactcagag
gatgagaagcagcagtatctcccattagccttgcaccttgcatctgaattcttcctcagg
aatcccaataaagatgtgcgcctccttgtagcatgttgcttggctgatatctttcgtata
tatgctcctgaagctccatatacttcccatgacaaacttaaggacatattcttgtttatt
acaagacaactaaaaggcttggaggacacaaagagccctcaatttaacagatacttttac
ttgttagagaatttagcttgggttaaatcttacaacatctgctttgagttggaagattgc
aatgaaatttttattcagctttttaggactcttttttcagttatcaataatagccacaac
cagaaggtacaaatgcatatgttggatttgatgagttctatcatcatggaaggcgatgga
gtaactcaggagctgctggactccattttgattaacctcattcctgcacacaagaacctt
aataaacaagcatttgatcttgcaaaagtcctgttgaaaaggaccgtccagaccattgaa
ccctgtattgccaatttttttaaccaggttctggtactgggaaagtcttcagtaagtgac
ttatcagaacatgtgtttgatttgatacaagagctttttgccatagatcctcacttactg
ctgtctgtcatgccacagcttgaattcaagctgaagagcaatgatggagaagaacgttta
gctgttgttcgacttctggctaaactctttggctccaaagattctgatctggccacacaa
aatcgtcctctttggcagtgctttcttgggcggttcaatgatatccatgtccctgtgaga
ttagagagtgtgaaattcgccagtcattgtttaatgaaccatccagacttagcaaaagac
ctcactgaatatttgaaggttagatcacatgacccagaagaagccattcgacatgatgtt
attgttacaattattactgcgggcaagagagatctttctttagtcaatgaccagctgctt
ggctttgtaagggaaagaacactagacaaacggtggcgagtaagaaaagaagctatgatg
ggtcttgcccagctatacaagaagtattgtcttcatgccgaagctggaaaagatgctgca
gagaaagtgagctggataaaggataaacttttacacatatattatcaaaatagcattgat
gacaaattactggtagagaaaatctttgctcagtatctagttccacacaatttggaaaca
gaagagcgaatgaagtgtttgtactatttgtatgctagcttggatccaaatgctgtcaaa
gcactgaatgagatgtggaagtgccagaacatgctaaggagtcacgtacgagaattacta
gacttgcataagcaacccacttcagaagcaaacagtgctgccatgtttggaaagctgatg
accatagcaaaaaaccttccagatcctggaaaagcacaagattttgtgaagaaattcaac
caggttctgggtgatgatgagaaacttcggtctcagcttgaactgttaattagccccacg
tgttcttgtaaacaggctgatgtctgtgtgagagagatagcccggaaacttgcaaatcct
aaacaaccaacaaatccttttctggaaatggtcaaatttcttttggaaagaattgcccct
gtacatattgactcagaagccattagtgcactagtaaaattaatgaataaatccatagag
gggacagctgacgatgaagaggagggtgtaagtcctgatactgctatacgtgcaggactt
gaacttctcaaggttctgtcctttacacatcctacctcgttccactctgcagagacctat
gagtctctgctgcagtgcctcaggatggaagatgataaggtagctgaggcagccatacag
attttcagaaacacaggtcacaaaatagaaacagacctgccacagataagatcaacgcta
attccgattttgcatcagaaagcaaaaagaggtactcctcatcaggcaaaacaagctgtt
cactgtatacatgccatattttcaaataaagaagtgcagcttgcacagatctttgagcct
cttagtagaagtttgaatgccgatgtaccagaacaacttataactccattagtctcattg
ggtcatatttctatgttggctccagaccaatttgcttctccaatgaaatctgttgttgca
aatttcattgtgaaagatctcctaatgaatgataggtcaacaggtgagaaaaatggaaaa
ttgtggtctccagatgaagaagtttctccagaagtactagcaaaggtgcaagcaattaaa
cttttggtacgctggctgttgggtatgaaaaacaaccagtcaaaatctgcaaattccaca
ctccggttattatcagctatgctcgtcagtgaaggagacttgacagaacagaagcgaatc
agtaaatcggatatgtctcgactgcgattagccgctggtagtgcaataatgaagcttgca
caggaaccctgttaccatgaaataattaccccagaacagttccagctctgtgcacttgtc
attaatgatgagtgctaccaagtgaggcagatatttgcccagaaactgcataaggcactt
gtgaaattactccttcctttggaatatatggcaatctttgctttgtgtgccaaagaccct
gtgaaagagagaagagcacatgccagacagtgcttactcaaaaacatcagtatacgaaga
gaatatattaagcagaatcctatggctaatgaaaaattgctgtccttgctgcctgaatat
gtggtaccgtatatgattcacttactggcacatgatccagatttcacaaaacctcaggat
gttgatcagcttcgtgatgtcaaagagtgcctgtggttcatgcttgaagttttaatgaca
aagaatgagaacaatagtcatgctttcatgaaaaagatggcagaaaacatcaagcttacc
cgagatgctcagtctccggatgagccaaaggcaaatgaaaaactttatacagtatgtgat
gtagcactgtgtgtcatcaacagcaaaagtgctttgtgcaatgcagattcaccgaaggat
cctgtattgccaaccaaattttttacacagcctgaaaaggacttctgcaatgacaggaat
tacatttcagaggagacaagggttcttcttttgacaggaaagccaaaaccaactggtgta
ctgggtacagtaaataaaccattatctgcggctggaaggagaccgtatattagaactaca
ggatcagagactggaagcaatatcagtgtaaactctgagctgagctcttctgcaggaaac
agatcaagggaacaaagttcggatatatcagaaactggggtcagtgaaaatgatgaaaat
cctgtgaggattatttcagtcacaccagcaaagacagaacctgtgaaaaacaaggagatt
aattctgatcaggctacacaaggaaacagcactgaacgtgggaaaaaaagaacagcaaca
gcagctggaactgagaatattcatcaaaaaccagaagaaaaaaatgtagatgaaacagga
ccatcgctcgcagcaaaaaccaggagagggcgtctactcaaacctgaacctcagggtacc
actgcaaaaaatgaagaagcaaataaacaacctgtcagaggaaggaaaagggcagcaggc
agtcaagaaagtccagggagtttagaggcaggtaacgccaaagcaccaaaacagcaagac
acagcaaaaaagccagcagcagcacagagacaaattgatctacaaaggtaa
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