Cuculus canorus (common cuckoo): 104064357
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Entry
104064357 CDS
T08597
Symbol
CLSTN3
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104064357 (CLSTN3)
Cell adhesion molecules [BR:
cuca04515
]
Cadherins
Cadherin related
104064357 (CLSTN3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
SMN_G2-BD
Motif
Other DBs
NCBI-GeneID:
104064357
NCBI-ProteinID:
XP_053938026
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All DBs
Position
1:125884589..125900033
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AA seq
971 aa
AA seq
DB search
MGDPRPRAAALLPLLCLYAALPAAAANKANKHKPWIEAEYQGIVMENDNTVLLNPPLFAL
DKDAPLRYAGEICGFRIHGAGVPFEAVILDKATGEGLIRAKEPVDCEAHKEHTFTIQAYD
CGEGPDGANTKKSHKATVHVRVNDVNEFAPVFVEKLYRVAVTEGKLYDRILRVEAIDGDC
SPQYSQICYYEILTPNIPFLIDNDGNIENTEKLQYSGDRLYKFTVTAYDCGKKRASDDAE
VEIQVKPTCKPSWQGWNKRIEYTPGAGSLALFPSIHLETCDEPLWNIQATVELQTNHVAK
GCDRDNYSEKSLRKLCGAASGEIDLLPVPSPTANWTAQLSVHYSQDSSLIYWFNGSQAAQ
VPVVNGLNAHEGLSDHFTLSVWMKHAVVPSKGRREEETVICSTVQSEEGYSHYSLSVHGC
RIAFLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYVDGVSYDPALIHDNG
LIHPPRQEPSLMIGACWTEEKIKGNESSSDTVQGDPLSIHHYFHGYLAGFSVRPGSLESR
EVIECLYACREGLDYSDFDSLGKGMKVHVNPSQSLLTLEGDDVETFNHAIQHVAYMNSLR
FATPGVRPLRLTTTVKCFSEESCVSIPDVEGYVVVLQPDAPQILLTGNAHFAHPASDFEA
SDGVPLFPNLQITCSISHQVEAKKDENWHGTVTDTRMSDEIVHNLDGCEISLVGDDLDPE
REYLLLDGALLQQRGLELVNTSAYLTITGVESIAVYEEILRQASYHINRGAALYERKFHL
SCTEMNGRYSSNEFTVEVNVLHNMNRAAHPNHILSSQQFIHRGHHLPPELSGHSLASTHN
NPMVPSAATVIIVVCVGFLALMVILGILRIHSLHRRGVGQEVPGTAQGGHVSTGGKESDM
FWDDSALTIIVNPMESYQSCQERAAESGEGRGSEGMEDEDDSTDSETPDSLDSNDVDDRH
IIGRSNVPHRY
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaccctcggccccgcgccgccgccctcctgccgctcctttgcctctacgccgcg
ctgcccgccgccgccgccaacaaagcaaacaagcacaaaccctggattgaagctgagtat
cagggcatcgtcatggagaatgacaacacagtcctgctcaacccaccgctatttgcactg
gacaaagatgctccattgcgctacgcaggtgaaatctgtggcttcaggatccatggggca
ggggtaccttttgaagctgtgatcttggacaaagctacaggtgaggggctgattcgggcc
aaggaaccagtagattgtgaagcacataaggagcacacattcaccatccaagcctatgac
tgtggagagggacctgatggagcaaataccaagaaatcacacaaggccacagtgcacgtt
cgagtaaacgatgtgaatgagtttgcccccgtctttgtggaaaagttgtatcgtgtggcc
gtgactgagggaaagctgtatgaccgtatcttgcgtgtggaggccattgacggagactgc
tcgccacagtacagccagatctgctactatgagatcctgacccccaatattccctttctg
attgacaatgacgggaacatcgagaacacagagaagctgcagtacagtggagatcgtctc
tacaaattcacagtgacggcctatgactgtggaaagaagcgggcttctgatgatgctgaa
gtggaaatccaggtgaaacccacctgcaagcccagctggcagggctggaacaagaggatc
gagtacacaccaggtgcaggcagccttgcacttttccccagcattcacctggagacctgt
gacgagcctctgtggaacatccaggccacagtggagctgcagacaaaccatgtggccaag
ggctgtgaccgggataactactctgagaagtcactacgcaaactttgtggtgctgcctca
ggagagatcgacctgctgccggtgcctagccccacagcgaactggaccgcacagctctca
gtgcactacagccaggacagcagcctcatctactggttcaacggcagccaggctgcccag
gtgcctgtggtgaatgggctgaatgcccatgaggggctcagtgaccacttcacgctgtcc
gtgtggatgaagcatgccgtggtgcctagcaaaggcaggagagaagaggaaacagtgatt
tgcagtacagtgcagagtgaggagggctactcgcattactctctgtctgtgcacggctgc
cggattgctttcctctactggccattgctggaaagtgcaaggcctgtgaagtttctctgg
aagcttgagcaggtctgtgatgatgaatggcaccactatgccctcaacctggagttcccc
actgtcacactctacgtggatggtgtctcttatgaccctgccctcatccatgacaatggc
ctcattcacccccctcgtcaggaaccctcactcatgatcggagcctgctggactgaggag
aaaatcaaaggaaatgaaagctcctctgatactgtacaaggagatcctctgtcgatccac
cactacttccatggttacttggctggcttcagtgtacgccctggtagcttggagagccga
gaggttattgaatgcctgtatgcctgccgtgaggggcttgattacagtgacttcgacagt
ctgggcaaagggatgaaggttcatgtgaacccttctcagtccctgctcacattggaaggt
gatgatgtggaaaccttcaaccatgcgatccagcatgtggcttacatgaattccctgcgt
tttgctactcctggagtcaggccactcaggcttaccactactgtcaagtgtttcagtgaa
gagtcctgtgtctccattcctgatgtggaaggttacgttgtggtgctacagcctgatgcc
cctcagatcctgttaactggcaatgcccactttgctcatcctgcatcagacttcgaggct
tctgatggggtccccctgttccccaacctccagatcacctgctctatttctcaccaggtg
gaagccaagaaggatgagaattggcatggaactgtgacagacacacgaatgtcagatgag
attgtgcacaacctggatggctgcgagatctcattggtaggagatgacttggacccagag
agggagtatctgctcctggatggagcactgctgcagcagcggggcctggagcttgttaac
acctctgcctacctgaccatcacaggtgtggaaagcattgcagtttatgaggaaatacta
cgccaggcctcatatcacatcaaccgtggcgctgctctttatgaaaggaagtttcacctg
tcttgcactgagatgaacggacgctactccagcaatgagtttactgttgaggtgaatgtc
ctccacaacatgaaccgagctgctcatcctaaccatattctgagttcccagcagttcata
caccgaggccatcatttacccccagagctatctgggcacagcttggcaagcacccataac
aacccaatggtccctagtgctgccactgtcatcatcgtggtgtgtgtgggctttctggca
ctcatggtgatccttggcatcctgcgcatccactccctgcaccggcggggagtggggcaa
gaggtccctgggactgctcaaggcgggcacgtgagcaccggaggcaaagagagcgacatg
ttctgggatgactcagccctcactatcatagttaaccccatggagtcctaccagagctgc
caggagagggcagctgaaagtggcgagggcagaggtagcgagggtatggaggacgaagat
gacagcaccgactcagagacacctgactccctggacagcaatgacgtggatgaccgacac
atcattggcagaagcaacgtccctcaccgctattag
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