Cuculus canorus (common cuckoo): 104064403
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Entry
104064403 CDS
T08597
Symbol
NOP2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104064403 (NOP2)
Enzymes [BR:
cuca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
104064403 (NOP2)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104064403 (NOP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
BMT5-like
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
104064403
NCBI-ProteinID:
XP_053912401
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All DBs
Position
1:complement(125386750..125394865)
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AA seq
685 aa
AA seq
DB search
MGRKLDPTRKEKRGPGRKARKQRGAEVELARFLPPEPEAGRKKLSSHGRRRAAKRRLAAG
RSPATGGGGRGPEIKEQVSPQKQKPAVKTAGQTPHRQSGFSDDNSKWLAPAKAKKTPSKG
NNMELSSDGEVEESIWEMEEEEDGSSEEMVDDYGASSSEEEELLPIEKAALKQKADRGGL
SEDDSEEEEEEKEAAEEARTQKMGQKEEESPDLQLNLDIDEQFKLPTNEQIEREAVEPPD
LHIIHQRIKGNMEVLQDFAVKREEGRTRQEYLALLRRDMAAYYSYSDFLLLKLMDIFPLP
ELINFLEANEVPRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSSVPI
GATPEYLAGHYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGVILAN
DSNAERLRSVVGNLHRLGVTNAVVSNCDGRQFPKVLGGFDRVLLDAPCSGTGVISKDPAV
KTNKDEKDILRCAHLQKELILNAIDSVNAASETGGYIVYCTCSVMVEENEWVVDYALKKR
NVRLVDTGLDFGKEGFTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKLKKFSNAIPQAQ
KDEEPAVVAATPSTVPNTVMEPQPKKKKLEGSKVDKEQKPPQPALKKRHTLQAQRRPLKT
GRPSAKTMRPQVPGRKKHRVKQKGQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaagttggatcccaccaggaaggaaaagcgcggccccggtcgcaaggcccgc
aagcagcgaggggccgaggtggagttggcccgcttcctgccgccagagcccgaggccggc
aggaagaagctctccagtcacgggaggaggagggctgcgaagaggcgtctggcggcgggg
aggagcccggccacgggaggcggcgggcggggaccagagattaaagagcaggtgtccccg
cagaagcaaaaacctgccgtaaagacagcaggacaaacccctcaccgccagtctggcttc
agtgatgacaattcaaaatggctggctccagccaaagccaagaaaaccccatctaaagga
aacaacatggagttatccagcgatggtgaggtggaagagagcatctgggagatggaggag
gaggaagatgggagcagcgaggagatggtagatgattatggtgcctcatcatcagaggaa
gaagagttgctgcctattgaaaaagctgccctgaagcagaaggctgacaggggaggcctc
agtgaagatgacagtgaggaggaggaggaggagaaagaagcagcagaggaagcaagaacg
cagaaaatgggacagaaggaagaagagagcccagatctgcagctcaacctggatatagac
gaacaatttaaactgccaactaatgaacagattgagagagaggctgtggagccacctgac
ctgcacatcattcaccagcgcatcaagggcaacatggaggtgctgcaggactttgcggtg
aagcgggaggaaggacgcacacgacaggagtacctcgcgttgttgcgccgggacatggct
gcctactattcctacagtgacttcttgctcttgaagctcatggacatcttcccgctcccc
gagctgataaacttcctggaagccaatgaggttccccgccctgtgaccattcgcaccaac
acactgaagacacgtcgacgggacctggcgcaggctctaatcaaccgtggtgtgaatctc
gaccccttggggaagtggtcgaaaacaggacttgttatttatgactcctccgtgccaatc
ggtgccacccccgagtacctggctgggcactacatgttgcaaggagcctctagtctcctc
cctgttatggctctggctccacaggagaatgaacgtatcctggatatgtgctgtgcccca
ggaggcaagaccagctacatagctcagcttatgaagaacacaggtgtgatcttggccaat
gacagcaatgccgagcgactgcgtagtgtggtagggaacttgcatcgactgggagtcacc
aatgctgtagtgagtaactgcgatggacgccagttccccaaggtgcttggtgggttcgac
cgtgttttgcttgatgctccttgtagtggaacaggcgtcatttccaaggatcctgctgtc
aaaaccaacaaggatgagaaagacattctacgctgtgctcacctgcagaaggagctgatt
ctcaatgctatagattcagtcaatgctgcctcggagacgggaggctacattgtctactgc
acttgctctgtcatggtggaggagaatgagtgggttgtagattatgccctgaagaaacgc
aacgttcgtttggtggacacaggcctggactttggcaaggaaggcttcaccaggttcaag
gatcgtcgcttccacccctccctcaagtctacacggcgtttctatcctcacacacacaat
atggatgggttcttcattgccaagttgaagaaattctctaatgccatcccccaggcacag
aaagatgaagaacctgctgtggttgcagcaactccgtccactgtccccaatactgtcatg
gagccacagccaaaaaagaagaaacttgagggatcaaaagttgacaaagagcagaaacca
ccacagcctgctttgaagaagagacatacattgcaagcacagaggagacccttgaagact
ggccggccttctgccaaaacaatgcgtcctcaggtccctggcaggaaaaagcatagagtg
aaacagaagggacagtga
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