Cuculus canorus (common cuckoo): 104064416
Help
Entry
104064416 CDS
T08597
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03030
DNA replication
cuca03410
Base excision repair
cuca03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104064416 (FEN1)
03410 Base excision repair
104064416 (FEN1)
03450 Non-homologous end-joining
104064416 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuca03032
]
104064416 (FEN1)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104064416 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
104064416 (FEN1)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
104064416 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
104064416 (FEN1)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
104064416 (FEN1)
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104064416 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
5_3_exonuc_N
XPG_I_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
104064416
NCBI-ProteinID:
XP_009565043
UniProt:
A0A091GDP3
LinkDB
All DBs
Position
5:16790864..16795684
Genome browser
AA seq
382 aa
AA seq
DB search
MGIHGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGAEVLQNEEGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQEAGEE
NNIEKYSKRLVKVTQQHTDECKKLLTLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASETKKLPIQEFHLNRILQDLDLTWEQFVDLCILLGCDYCESIRG
IGPKRAIELIKEHKSIEKIIQQIDTKKYPLPENWLHKEAQKLFLEPDVINPDAVELKWTE
PNEEELIQFMCGEKQFNEERIRNGVKRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPET
KGSAKKKAKTNNATAAKTKKGK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccatggcctggctaagcttattgccgatgtggctcctggtgccatccgggag
aatgacatcaagtcgtacttcggccggaaggtcgctatcgatgcctccatgagcatttac
cagttcctgatcgctgtgcgtcagggcgctgaagtccttcagaacgaagaaggtgagacc
accagccacctgatgggcatgttctaccgcaccatccgcatggtggagaacggcatcaaa
ccagtttacgtcttcgacggcaaaccaccacagctgaaatcgggagagctggcgaagcgg
actgagcgccgagctgaggctgagaaacacctccaggaagctcaggaggctggagaggag
aacaacattgagaagtacagtaagaggttggttaaggtgacccagcagcacactgacgag
tgcaagaagttgctgacgctgatgggcattccctacgtggaggcaccgggcgaagccgaa
gccagctgtgccactttggtgaaggccgggaaggtctatgcggctgctacagaagatatg
gattgcttgacctttggtagtcctgtattgatgcgacatcttactgccagcgagacgaag
aagctgcctatccaggagtttcacctgaaccgcattctgcaggatctagacctgacctgg
gagcagtttgtggatctgtgtatcctcctaggatgcgactactgcgagagcatccgtggt
attgggcccaagcgcgccattgagctcatcaaggagcacaaaagcatcgagaagatcatt
cagcagatcgacaccaagaagtaccctctgcctgagaactggttacacaaagaagcccag
aagctctttctagagcccgatgtgatcaaccccgatgctgttgagctgaagtggaccgag
ccgaatgaggaggagctcatccaattcatgtgtggagagaagcaattcaacgaagaacgg
atccgcaacggtgtcaagaggctgagcaaaagccgtcagggcagcacacagggccgcctc
gacgacttcttcaaggtgacgggctccatcacatcagccaagcgcaaagagccggagact
aaggggtcagcgaagaagaaagccaagaccaacaatgccacagccgcaaagaccaaaaag
gggaaatag
DBGET
integrated database retrieval system
