Cuculus canorus (common cuckoo): 104064444
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Entry
104064444 CDS
T08597
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
cuca04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104064444 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104064444 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104064444 (SNW1)
Spliceosome [BR:
cuca03041
]
Complex B
Other components
Prp19-related factors
104064444 (SNW1)
Complex C
104064444 (SNW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
104064444
NCBI-ProteinID:
XP_009565076
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Position
5:complement(17965782..17982937)
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AA seq
538 aa
AA seq
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MALNSFLPAPTQLSQDQLELEERARAQRSRQTALVSSRREPPPYGYRKGWIPRVLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPELQRPDEETIREITEKTRAALEKSVSQKIAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRPSNEVQYDQRLFNRSKGMDS
GFAGGEDEIYNVYDQPWRSGKDMAQNIYRPSKNVDKDMYGDDLEARIKTNRFVPDKEFSN
SDRNSRGRGRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHETKKRRKD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaacagttttttaccagctccaacccagctgtctcaagaccagctagaactc
gaagaaagggcaagagctcaaagatctaggcagactgctctagtctcatcacgacgggaa
cctcccccgtacggttaccggaaaggatggataccacgagtgctagaggattttggagat
gggggtgctttcccagaaattcacgtggcccaatacccattggatatgggccgaaagaag
aaaatgtccaatgctttggctgttcaggtggatgcagaaggaaaaataaaatacgatgca
attgctcgacaaggacaatcaaaggacaaggttatttacagcaaatacacagatcttgtg
ccaaaagaggtcatgaatgtggatgatcctgaattgcaaagaccagatgaggagacaatt
agagagataacagagaagacaagagcagccttggagaaatcagtctcccaaaaaattgcg
gcagccatgccagttcgagcagctgacaaactagctcctgcacaatacattcggtacacg
ccatcccagcaaggcgttgccttcaactctggagcgaaacagagagttattcggatggtg
gaaatgcagaaggatcctatggagcctccaagattcaaaattaacaaaaagattccccgt
ggaccaccttctcctccagcacctgtaatgcactctcctagcagaaagatgaccgtgaaa
gagcagcaagagtggaaaattcctccatgcatttcaaactggaaaaatgcaaagggttac
accattccattagacaagcgtctggctgcggatggcagaggactgcagactgttcatatt
aatgaaaactttgccaagcttgctgaggctctctatatagctgacagaaaggctcgtgag
gctgtagaaatgcgtgcccaagtggagaggaagatggctcagaaagaaaaagagaaacat
gaggaaaagctccgtgaaatggctcagaaagccagggagagaagagcagggatcaaaacc
catgttgaaaaagaggatggcgaagctagagaaagagatgaaatcagacatgaccggcgc
aaagagagacagcacgacagaaatctttccagggcagcccctgacaaaaggtcaaagctg
cagagaaatgagaacagagatatcagtgaagttattgccctgggggtacctaaccccagg
ccatccaacgaggtccagtatgaccagaggctgttcaaccggagcaagggcatggacagt
ggctttgctggaggagaggatgaaatttataatgtttacgaccagccttggagaagtggc
aaagatatggcccaaaacatctacaggccaagtaaaaatgtggataaggacatgtatggt
gatgatctagaggccaggataaagaccaataggtttgttcctgacaaagagttttctaac
tctgatcgtaacagcagggggaggggcagagatggaccagttcagtttgaggaggatcca
tttggtttggacaaatttctggaagaagctaagcaacacggtggttctaaacggccctcg
gatagcagccgccctaaagaacatgagcatgagacgaaaaagaggaggaaggactga
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