Cuculus canorus (common cuckoo): 104064452
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Entry
104064452 CDS
T08597
Symbol
PDZD2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
104064452 (PDZD2)
Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
104064452 (PDZD2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104064452
NCBI-ProteinID:
XP_053911022
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All DBs
Position
Z:66780776..66994254
Genome browser
AA seq
2681 aa
AA seq
DB search
MPITQDNAGVFLPLLCQWLQNSRREGAEGAEQQLCRSAVQKLSEYIQLNFSVDESKLQSG
SCGTSDTEICTVYLAQEMRKTEVLGLSFGNIPALGDYGEKRRGGKKRKGHKGPVLDVGCI
WVTDLKKNSPAGKCGRVRLKDEILSLNGQLMVGVDVTGASYLAEQCWNGGFVYLIMLRRI
KRKAPLPPSNGNNSNSCDPKAKPNPEPGDRAAQNGKRTRKFGVITRTPGSKDSKEKSGLE
HGNGHCTPMEVEVAQPETSEAESNGEEQLRGTGAQYWCRLSDGGVPDIGDQSAQREGCRV
WKMHILKGTDGLGIQITGGRGSKRSPHSIIITHVEEGGSAHRDGRLTVGDELLMINGQSL
VGLSHQDAVALLRSAAGLVQLVVASKESPEEDFLKYPSTSLPDLLSTCSVQDPPSCTDNK
ENEEPEEEEVKGVNMSPETLVAVMETEKSQDPACAEVSKGNNQSPTLASGILKYRSRSQG
GGSRLESVGEDDELTVENGESSYEIAVKYSRGGRKHSLPQQLESVGARQDYHIVKKSTRS
FSAAQVESPWRLTQPSIISNIVLMKGQGKGLGFSIVGGQDSARGRMGIFVKTIFPNGAAA
ADGRLKEGDEILEVNGESLQGLTHQEAIQRFKQLKKGVVTLTVRTRLRSPSLTPCATPTL
LSRSSSPSSSASGGAPLPVPDEVDGFSSNRKGPGPKDRIVMDVTLHKEPGVGLGIGACCL
TLENSSPGIYIHSLAPGSVAKMDGRLSRGDQILEADSVSLRHAALSEAYAILSECGPGPV
SLIISRHPNPKVSEQEMDEAIARTTHRESKDTTSSHVTGVVQKSPSPSVKAKQGETSSPL
SWTMKRFLEPASRQGSVSSEAELSQYFSHDGTSQLPFSDAVAGSCDEEQLRQKNRNSLLD
DGSFLPGNLSAREAGVAKANGLSSPASGRSSSLHNKHVESVRPGILSDSPKSARSPFHRQ
RRVVFYDGDVSDDDESSHSQRSQRAKNQEDAGIVIATSSVEIDDESQDSESHRYSGMETS
SPVFSNTMESANSTLEQVDSPFFPIIAFDYSSMPEVRLGSLSLRELREAQLESKRSPKLE
HRAVTRVKSMMSTECRSLQRQRMEEHGSYNKPVARTLPHSKKCEASNGAGQGQGEIVTLV
RNEHESFGLDLEIQAMPLKVVVTGLRPGGAAEMGSMGKMAVGDEITTINSIPVNKMTYEE
ICLLMQCLPTSVTLEIQKAASAVNRFTNLILSPGVDSQNHTSVNSILATEEERRAGKREG
AGLQNTGGSCAMERTTVPPDATSKDVQRGTMKSSCAEDCTAVPITDIDDLLNQMGAPKSR
ASRTPSRAESPLRDEYTTMCCCGTDEGCPGPEPQPAKEELLEKTMNCGTNAQGVLGLSAL
DSINTGKLFTVNKNSLNNYSRNFSSLNEDELPAANSLDCKRSDLFPKSMYGAAEDSHSDT
ESVTETFDSAEVLFGPCAAANAPAVCTVTESDEEQIEICCMNEELQKPTQKQPLASAIKS
SSVSHLHSYSSKVLQTEGCAVCGSLETRVNKLGLEDCDGPTQCPSQCSDMSSASLCSPSS
VFLPEKDILKNSVSNPEVYSLCNNGALSTEEQTDLGNGNGHMKCCESIEEGGSLHCKKTS
FGSAQNVSGLENNLLEKEGYRGEQRSRSGIETLVDDCNHPVSYCLVKKEINGLSSLSKAD
SNHVNASSPRAISLRSPFPTRSKDPKANTTHDLPGKNEKINSVTSGRTSNGKVQSSGTNH
CKGTAVPHSPSSQKKSCQESKGMAQKSIVDTLLINQKTKAGPKLKGFTIKSKAKVNSDSS
GINHTKVSGADQKRISVSPQLSPKLLGKKTPVSRNSPTNPDPGKSISVVSRTLKPELENK
PSLVITEDSVLPVLNGASCPAVTGEMKCGCGELTGLQQTWEKSKEKQVSMQPVVCQGKVA
KAGDFRARDSQSKVTSSPQGIPEVEYVKGKTENPGTGLNMIKSIYSADDIRQLDLQNEGL
SAGGSSLLRSSSVQQEQLEGQEIQRTFIEVKLSSSSSSSSSSASSSPASFLQLPLIEKTQ
EANAEVPRLTEEMGTMQYFSKADTTGDRNLYGLSKPVTRTYSMPAQLSGHLREESPVAEV
HPAQGPQGYAAEEKAATGMLKMVHLNPPNGQNGKEQAYTSKSTLRVHDTSSSSSDISCPA
TDKLRNFKRNYYYYELNWPHEATSSFSVKQRIKSFENLANFDRPIVKAIDIHSAARSPLA
RRSCGGIITTASPAEMPRALRRSLSSYGSSPSPANTTAKSPVNTEPVRVAEGGKGEGKPQ
RSGEGGAGADVAAFPTSASQARRNRGLGRPPLSRSRLRELRALSMPDLDKLCGEGFSGPQ
QPACFKTELEITPCRSLGMPARSDAAPPARCSHTEMGAMGASSPRDCGTGTLGSASDDDA
PHGSSLDGEHSGNCWSISLDQLLVSNLDQQKLQSVLSAVVPKCDIPAMLQEVKAQVKSKE
DTYFVVLHKEEGAGLGFSVAGGIDLEQKSVTVHRVFSKGVASQEGTIHRGDLVLSINGKS
LANSVHGDVLNALHQARLYTYAVIVIQKEKNKANNSSRLEISATGRKCVGSGKDVSMEIR
TDPNLDMDDVICVELLKTSAGLGFSLDGGKASIAGDRPLLVKRIFKGGAAEQSGNIETGD
EILAVSGKSLLGLMHYDVWNIIKSVPEGPVQLLIRKHRTSV
NT seq
8046 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcacgcaggacaacgcgggggtcttcctccccctcctgtgccagtggctgcag
aacagccgtcgagagggggctgagggtgctgagcagcagctctgccgctcagctgtccag
aagctgagcgagtacatccagctcaacttctctgtggatgagagcaaactgcagtcaggg
agctgtggaacttcagatacagagatctgcactgtgtacctggcccaggagatgagaaaa
actgaggttcttgggttaagctttgggaacatccctgctcttggggactatggggagaag
cgtcggggagggaagaagaggaaggggcacaagggaccagtgcttgacgtcgggtgcatc
tgggttacagacttgaagaaaaacagcccagctgggaaatgtggaagagtgcgactgaaa
gatgagatcctttccctgaatgggcagttaatggtcggcgtggatgtcactggtgcaagt
tacctggccgagcagtgctggaatggcggttttgtctacttgatcatgttgcgccgcatc
aagcgcaaagctcctcttcctccctccaacggcaacaacagcaacagctgtgaccccaaa
gccaagcccaaccctgaacctggagacagagctgctcagaatgggaaaaggaccaggaag
tttggggtcatcaccagaacacctggcagcaaggacagcaaagaaaaatcaggcttggag
catgggaatgggcactgcaccccgatggaggtggaggttgctcagccagagacctctgaa
gctgaaagcaatggggaagagcagcttcggggcactggggcacagtactggtgccggctg
tcggatggtggtgtgccagacatcggtgaccagtctgcccagcgagaaggttgccgcgtt
tggaagatgcacatcctgaaggggacagacggtctgggaatccaaataacaggaggcaga
gggtcgaagcggtcccctcacagcattatcatcacccacgtggaggaaggcggctccgca
cacagggatggcaggcttacggtgggtgatgagctcctcatgatcaacgggcaatccctg
gttggactctcccaccaggacgccgtcgctctccttcgctcagctgctggcctggtgcag
ctggtggtcgctagcaaggagtctcctgaagaggattttttgaagtatccgtctacaagt
ttaccagacttgcttagcacttgttcagtccaagaccctccctcttgcactgacaataag
gaaaatgaagagccagaagaagaagaggtgaagggagtgaacatgtctcctgaaacactg
gtcgctgtgatggagacagagaagtctcaagatccggcttgtgcagaagtgtccaaagga
aacaaccagagtcctactctggcaagtggaatattgaaatacagaagtcggtcccaaggt
ggtggatcccgcttggagtctgtgggagaagacgatgagctgacagtggaaaacggtgaa
tcaagttatgaaatagcagtgaaatattcccgaggtggaagaaagcactctctgccccag
cagctggagtcagtgggagccaggcaggactaccatattgtgaagaaatccacccgttcc
ttcagtgctgcccaagtagaatctccatggagactgacccagccatcgatcatttccaac
atcgtcctgatgaaagggcaaggcaagggccttggattcagcattgtgggaggacaggat
tctgctcgtggacgcatgggtattttcgtgaagactatattccccaatggagcagcggct
gctgatggaaggcttaaagaaggggatgaaattctagaagttaatggagaatctctacaa
ggactgactcatcaggaggccattcagaggtttaagcaactcaagaaaggagtggtgacc
ctgactgtgcgcacacggctgcgcagcccaagcctcacaccctgtgcaactcccaccctg
ctgagccgctccagctcccccagctccagtgccagtggtggggcaccactccctgtccct
gatgaggtggacggtttctcctccaatcgcaaaggacctggcccaaaggacaggatcgtc
atggatgtgacactccataaagagccaggggttgggctgggcattggagcctgttgtctg
actctggaaaacagttctccagggatatacattcacagcctggccccaggatcagtggct
aaaatggatggcagattaagtcggggtgaccagatcctggaggcggattcggtgagcctg
cgtcatgcggctttaagtgaagcctatgctattctgagcgaatgtggtccaggtccagtc
agccttatcattagtcgccatcctaacccaaaggtttctgagcaggagatggatgaagca
attgcacgtactacccaccgagagagcaaggacaccacctcctctcatgtcacaggagtt
gtacagaaaagcccatctccgagtgtgaaggccaaacaaggagagacctcatctcccctc
agctggactatgaaacgcttcctggagccagcaagccggcagggatctgtcagctccgag
gcagagctttcccagtacttctcacacgacggtacaagccagctgccattttctgatgct
gtagctggctcctgcgatgaagagcaactccgtcagaagaacagaaacagtttgttggat
gatggctcttttcttcctggcaacctgagtgctagagaagcaggagtggcaaaagcaaat
ggtctgtcttctccagctagtgggagatcatccagccttcacaacaagcatgtggagtct
gtccgacctggcatcctcagtgacagccccaaatcagcccgcagcccctttcatcgacag
aggagggttgttttctatgatggtgacgttagtgatgatgatgaaagttcccactcgcaa
agaagccagagggccaagaaccaggaggatgctggcattgttattgcaacctcatctgta
gaaattgatgatgagagccaggacagcgagtcacacagatatagtggcatggagacatct
tcccctgtcttcagcaacacaatggagtctgcaaacagcacgctggagcaagttgactct
cctttcttccccatcatagcgttcgattactcaagcatgcctgaagttcgtcttggcagc
ctgagtctgagggagctccgggaagcacagctcgaatctaagagatcaccaaaacttgag
cacagagcagtcacgagagtgaaaagcatgatgagcactgagtgccgcagccttcagaga
cagaggatggaggagcatggctcttataacaagcctgttgcaaggacactccctcacagc
aagaagtgtgaagcatccaatggagctgggcagggccagggtgaaatagtcactctagtt
cgcaatgagcatgagtcgtttggcctggatttggaaatccaggccatgcccttaaaggtt
gttgtcacagggctgcggccaggtggagcagcagaaatgggatcaatgggcaagatggct
gtaggagatgaaattaccaccatcaacagtatcccagtcaataagatgacgtacgaggag
atctgcttgcttatgcagtgtcttcccacatccgtaaccctggagatccagaaagcagca
tcagctgtcaacagatttacaaacctcatcctgtctccaggggtggacagtcaaaatcac
accagtgtcaacagcatccttgcaactgaggaagaacggagggctgggaagagagaagga
gcaggtttgcaaaacactggtggcagctgtgcaatggagaggacaacagtgccacctgat
gccaccagcaaagacgtgcaaagaggtaccatgaaaagcagctgtgcagaggactgcact
gctgttcccatcaccgatatcgatgacttgctcaaccaaatgggtgctcccaagagcagg
gcttcacgcactccgtcacgagcagaaagccccctccgagatgagtataccacaatgtgc
tgctgtgggactgatgaaggctgtcccggtcctgagccacaaccagccaaggaagagctg
ctggaaaaaacaatgaattgtggaactaatgcacaaggagttttggggctatctgcgttg
gactccattaacacaggcaaactttttactgtgaataaaaactctttaaataactattct
aggaattttagcagtttaaatgaggatgagttgcctgcagcaaactctctggactgtaaa
agaagtgacctgtttccaaagtctatgtatggggcagcagaggattctcactcggacaca
gagtctgtcacagaaacctttgatagcgctgaggtgttgtttgggccatgtgctgctgct
aatgcccctgcagtctgtactgtaacggagtcagatgaggagcaaattgagatttgttgc
atgaatgaggagctgcaaaagcccacacagaagcagcctcttgcatctgcaataaagtca
tcttctgtctcccatttgcactcttacagcagcaaagttttgcagactgaaggctgtgca
gtatgtgggtcattggagacaagagtcaataagctaggcttggaggattgtgatggtccc
actcagtgtccctcacagtgttcagatatgtcctcggcatccttgtgttctccttcctca
gtttttctgccagaaaaagacatcctaaagaattcagtcagcaatcctgaagtttactct
ctgtgtaacaatggtgccttaagtacagaagaacagacagatttggggaatggtaatgga
catatgaaatgctgtgaatccattgaagagggagggtctctgcactgcaaaaagacgagc
tttggttctgctcaaaatgtcagtggcttagagaacaacttacttgagaaagaaggatat
cgtggtgaacagagatccagatctggaattgaaacattggttgatgactgtaatcatcct
gttagttactgcttggtgaagaaagaaatcaatggtttgtccagcttgtctaaagcagac
agcaatcatgtgaatgcatcgtcaccaagagcaatatccctcaggtctccctttcccact
aggtctaaagatccaaaggctaacacaactcatgacttgccagggaaaaatgagaaaatt
aactctgtgacttcaggaaggacttcaaatggaaaagtccaaagctcaggcacaaatcac
tgcaaaggaactgcagtaccacacagcccatcctcacagaagaaatcctgtcaggaatct
aagggaatggcacaaaaaagtatagtggatacccttttaattaaccagaagaccaaagca
ggaccaaagctaaaggggttcaccatcaaaagcaaagcaaaggtaaattcagattcttct
ggcattaatcataccaaagtcagtggagctgatcagaagagaatttccgtttctccacag
ctgtcccctaaactcctggggaagaaaacaccagtgtcccgtaattcacctacaaaccca
gatcctggcaagagcatttcagttgtctcaagaactctgaagccagagctagaaaataaa
ccatcactggtaattactgaagattcagttctgcctgtcctgaatggcgcaagctgccca
gcagtgactggtgaaatgaagtgtggttgtggggagctaacaggcctgcagcagacatgg
gaaaagtcaaaagaaaagcaagtttccatgcagcctgtggtgtgtcagggtaaggttgct
aaggcaggtgatttcagagccagagacagtcagtccaaagtcacttcatctcctcagggg
ataccagaagttgagtatgtgaaagggaagactgagaaccctggaacaggcctgaacatg
atcaaaagcatctacagtgcagatgacattaggcaattagatctgcaaaatgaaggacta
tctgctggaggctcttctttattgaggtcctcctcagttcagcaggaacagctggaaggg
caggagatccagcgcactttcattgaggtgaagctttcctcctcctcttcctcctcctcc
tcctctgcatcttcctcaccagcatcattcttgcagctgccactgattgagaaaacacaa
gaggcaaacgcagaagtgcctcggctgactgaggagatggggaccatgcagtatttctca
aaagcggataccactggagacagaaatctctatggcttgtcgaaacctgtgacaaggact
tactcgatgccagcccagttatcgggtcacttgagggaggagtctcctgttgcagaagtt
caccctgcacaaggaccccagggctatgctgcagaggagaaggcagcaacagggatgtta
aaaatggtccatctcaacccaccaaatggccagaatgggaaggagcaggcgtacacctcc
aaaagcaccctgagggtccatgatacgtcctcctccagcagtgacattagctgccctgcc
accgataagctgaggaatttcaagaggaattactactactacgagttgaactggccgcat
gaagctacctcatccttctctgtcaaacagaggatcaaatcctttgaaaatctggcaaat
ttcgacaggcccattgtgaaagccattgatatacactcagctgcaagatcccccctcgcc
aggaggtcctgtggtgggataatcaccactgccagccctgctgagatgccgcgggctttg
cggcgcagcttgagctcctatggcagcagcccaagcccggccaacaccacagccaaatct
cccgtcaacacagagcccgtgcgtgtggctgaggggggcaagggggaaggaaagccccag
aggagcggggaaggtggtgctggggcagatgtggccgcttttcccacctcagcctcccag
gctcgccgcaaccggggtctggggcggccgcccctgtcacgctccaggctgcgggagctg
agagccctcagcatgcctgacctggacaagctgtgtggagagggcttctcggggccacaa
cagcccgcctgcttcaagacggagctggaaatcacaccctgcagatcccttggcatgccc
gcccggagtgacgcagccccgccagcccgctgcagccacactgagatgggtgcgatgggt
gccagcagccctcgggactgtggcacagggaccctgggatctgcctcggatgatgacgca
ccccatggcagctctctggatggggagcactcgggaaactgctggtccatcagcttggat
cagctgcttgtctcaaacctggaccagcaaaaactgcaatctgttttgtcagcagtagta
ccaaaatgtgacattccagctatgctccaagaggtcaaagcacaagtaaagagtaaagaa
gacacgtacttcgtagtcttgcacaaagaagaaggagctggcctgggatttagtgtggct
ggaggaatagatctggaacagaaatcagtcacagtgcacagagtgttttcaaaaggagtg
gcatctcaggaagggactattcatagaggagatcttgttctgtccatcaatggcaagtcc
cttgcaaactcagtccatggggatgtcctgaatgctcttcatcaggcaagactgtacact
tatgcggtcattgtcatccagaaggaaaaaaacaaagcaaacaattcttccagacttgaa
atatcagctactggcagaaaatgcgtggggtccggaaaggatgtttccatggaaatacga
acagatccaaacctggatatggatgatgtcatctgcgttgaattattgaaaacctctgct
ggcttgggattcagtcttgatggtggaaaagcttccattgctggagacaggcccttactt
gtaaaaagaatatttaaaggtggtgctgcagagcaatctggaaacatagaaactggagat
gaaattcttgctgttagtggaaaatcattacttggcctcatgcattatgatgtgtggaac
attattaagtctgtgccagagggccctgttcagctactaatcagaaaacacagaacttcg
gtgtga
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integrated database retrieval system
