Cuculus canorus (common cuckoo): 104064476
Help
Entry
104064476 CDS
T08597
Symbol
SPTB
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104064476 (SPTB)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104064476 (SPTB)
Intermediate filaments
Intermediate filament-binding proteins
104064476 (SPTB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
104064476
NCBI-ProteinID:
XP_053923064
LinkDB
All DBs
Position
5:complement(16933920..16954129)
Genome browser
AA seq
2313 aa
AA seq
DB search
MTSANDYEQLELQQPYGRVNVRWDASDDELDNDNSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVTCRISDLYMDLRDGRVLIKLLEVLSGELLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIIVHTQEGRETRSARDALL
LWCQMKTAGYPHVNITNFTSSWKDGLAFNALIHRHRPELVDFQNLTKSNARHNLEHAFSV
AERHLGITSLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLEVEGRRLGKVIEHAKET
ERMIEGYGGLASNLLTWIEQTIASLNSRSFANSLAGVQHQLQAFSTYRTVEKPPKFQEKG
NLEVLLFTIQSRMRANNQRVYTPNEGRLVSDINRAWEQLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMREAWLSENQRLVAQDNFGQDLPAVEAAKKKHEAIETDTAAYKERVQA
IEAVAKELEVEGYHDIQRINRRKDNILRLWEQLLELLAARRQRLEMNLVLQHLFQEMLHS
IDWMDEVKVQLASPECGKHLLEAEELLQTHQLLERDMALQAEKTRAISTAAFRFADAEGY
RPCDPKIIRDRVSHLELCRRELAALAARRRALLEQSRSLWTCLWELDETEAWIKEQEQLY
SSLDFGKDLPGVLLLQRRHAAFEAELRGRGGRLEQALAAGEGLAVAGQAADRLRERSAVV
RALWAQLEELAAFRRRGLREAEGFFQFQAETEELMEALRDARRRAAAEELGQDESHTRVL
LRQHHELLEELVAAKEQLDGLTQQADGFPPELRGSPEAQSRLEALWELHAEVAMLAEKRG
RQLQDALDLYTVFGESDACHLWMASKETWLGQLEVPQALEDLDVVQHRLDGLEQEMATVA
SQIAAVNQAADGLLASRHPRSPHVRQCQEQLNERWERFRALVAERHRAVGSALRLLNYRL
ECEETRQWLQSKARAVEATAELGRDLAGVLATQRKLYGIERELAVAEERLATLRSQADEL
AKERPEVAGEVAEQLTAAVAAWDELQAALRDQAASLGEAGQLRRFLQDLDDFQAWLFGAQ
KAVAATDEVPVSLAEAEELLQRHEAARRDAEEHADAFTTLMEAGEKVVGEQTDPQYEGLR
QRLQGVEAGWAALGRMAEARHRFLIQCRGFQEFLRDAKQAEILLTNQEYTLTHLDVPTTL
EGSAAALRRFQNFCAGVESSAEKVPEVVAGGTKLVAEGNIFAEKITEKCQALQKRHGDIA
AKVEEAAGLLQDNHELQTFLQNCQELDAWVEEKMLTALDASYGEARGLHGKWQKHQAFMA
ELAANRGWLEKIEKEGKELASRKPQYGEVVARQLEKLRERWDGLRHAGEEKGRQLFEANR
STLYAQSYGELESWLGQAEEELRSAEPAKDLTATNLQLKKLTRLEEQVGARMKELDELEW
QGPPLVRDEPDADGHEQKLRRRFRDLLEPLGRRRMELETAKAMYQLGRDLEDETLWVQER
LPLARSTEHGTDLQSVQCLAKRNETLQKELAGHGPRLAEVLRRGEAAVSSTGLSPELEVR
ARELQALWEMLRAETAARQQRLREAGEAQQYYLDASEAEAWISEQELFMGAEEKPKDEES
GLVMLKRHIRQQRSIEDYGQTIKELAGRAQQLLSAGHPEGEQIIRLQGQVDKHYAGLKEV
AEERRRRLENMSHLFQLKREVEDLEQWIAERDVVASSQEMGQDLDHVTLLREKFREFARD
TGSVGQERVDRVNLAIEDLIDAGHTEAATMAEWKDGLNESWADLLELIDTRMQLLAASHD
LHKYFYDGAELLSLIAARRQELPQDLGEDAGTVEAFHRMHSAFERDLQLLETQVQQFRET
AARLQAAYAGEKAAGIQEQEQEVARALQALLEACSGRRARLVDTADKHRFFGMVRDLLSW
MESTVRQIETQEKPRDVSSVELLMKYHQGIRAEVDARGKNFTACIELGKKLLQRKHQDSP
EIKVKLMELVEKRRAMMETWEQRWERLRLLLEVCQFSRDATVAESWLMAQEPYLASSDYG
QTVDAVEKLLKRHEAFEKSSATWEERIAALRKLTTLELMDGRTLRDGVTHVEGPEYHLDL
DGELEAGSEEEEEKRKGESTQDTSLPTTDGPEPLARTTGDEEPPSPSPRVPREEPEEPAT
LPARTCSIQLEGYLGRKHDLEAATKRASNRSWSTRYCVLRGGQLAFFKDAKSRALGLPCH
GEEPLGLRDALCEVAAGYKKKKHVFKLRLSNGSEWLFHGKDEEELQAWLQGLSSAITECQ
GSRGKAQSLPLPPAAPLPRKDKEKRFSFFPKKK
NT seq
6942 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggccaacgactacgagcagctggagctgcagcagccatatgggcgcgtcaat
gtccgctgggatgcctccgacgatgagctggacaacgacaacagctcagcgcggctcttc
gagcgctcccgcatcaaagccctggcagatgagcgggaggccgtgcagaagaaaaccttc
accaagtgggtgaattcacacttggctcgcgtcacctgccgcatctcggacctctacatg
gacctccgggacgggcgagtgctcatcaagctgctggaggtgctgtcaggagagcttctg
cccaagcccaccaagggccggatgcggatccactgcctggagaacgtggacaaggcactt
cagttcctgaaggagcagcgggtgcacctggagaacatgggctcccatgacatcgtggat
ggcaaccaccgccttgtccttggcctcatctggaccatcatcctccgcttccagatccag
gacatcatcgtgcacacacaggagggccgggagacgcgctctgccagggatgcgctgctg
ctctggtgccagatgaagacagcagggtacccccacgtgaacatcaccaacttcacctcg
agctggaaggatgggctggccttcaatgcccttatccacaggcacaggcctgagctggtt
gacttccaaaacctgaccaaatccaatgcccggcacaacctggagcatgcgttcagtgtg
gccgagcggcacctgggcatcacctcactcctcgaccctgaagatgtgttcacagagaac
cccgatgagaagtccatcatcacctatgtggtggccttctaccactacttctccaagatg
aaggtgctggaggtggaaggcaggcgcttgggcaaggtcattgagcacgccaaggagacg
gagcggatgatcgagggctatggagggctggcatccaacctgctcacctggatcgagcag
accatcgcctccctcaacagccgcagctttgccaactcgctggccggggtgcagcaccag
cttcaggccttcagcacctaccgcactgtggagaagccccccaagtttcaggagaagggc
aacctggaggtgctgctcttcaccatccagtcaaggatgcgagccaacaaccagcgcgtc
tacacaccgaacgaggggcgcttggtctctgacatcaaccgggcgtgggagcagctggag
aaagcggagcacgagcgggagctggcactgcgcaacgagctgatccggcaggagaagctg
gagcagctggcgcggcgatttgaccgcaaggcggccatgcgggaggcctggctgagcgag
aaccagcgcctggtggcccaggacaacttcggccaggacttgccagcagtggaggcggcc
aagaagaagcatgaggccatcgagacagacacagccgcctacaaggagcgagtgcaggcc
atcgaggcagtggcaaaggagctggaggtggagggctaccatgacatccaacgcatcaac
aggcgcaaggacaacatcctgcggctctgggagcagctcctggagctgctggctgcccgg
cgccagcgcctggagatgaatctcgtcctgcagcacctcttccaggagatgctccatagc
attgactggatggatgaggtcaaggtgcagctggcatcgcctgagtgtgggaagcacctt
ctggaggctgaggagctgctgcagacccaccagctgctggagagggacatggccctgcag
gcggagaagacacgagccatcagcactgctgccttccgcttcgccgatgctgagggctat
cgtccatgcgaccccaaaatcatccgggaccgcgtgagccacctggagttgtgccggcgg
gagctggcagcgctggcggcacggcggagagctctgctggagcagtctcgctccctctgg
acctgcctgtgggagctggatgagaccgaagcctggatcaaggagcaggaacagctctac
tcctcgttggactttgggaaggacctgccgggcgtgctgctgctccagcgccgccacgcc
gccttcgaggccgagctgcggggccgtggtgggcggctggagcaggcactggcagcgggc
gaggggctggcggtggcggggcaggcagccgatcggctgcgtgagcgcagcgctgtggtg
cgggctctgtgggcgcagctggaggagctggcagcattccgccggcgtggcttgcgcgag
gctgaaggtttcttccagttccaagcggagaccgaggagttgatggaggcgttaagggat
gcgcgacggcgtgcggctgctgaggagctgggacaggacgagtcccacacccgtgtcctg
ctgcggcagcaccatgagctgctggaggagctggtggctgccaaggagcagctggatggc
ttgactcaacaagctgatggcttcccaccggagctgcgcggcagccccgaggcacagagc
cggctggaagccctgtgggagctgcacgccgaggtggccatgctggccgagaagcgaggc
cgccagctgcaggacgccctcgacctctacactgtctttggcgagagtgatgcctgccac
ctctggatggcgtccaaggagacctggctgggacaattggaggtccctcaggcactggag
gacctggatgtggtgcagcataggctggatggactggagcaggagatggccaccgtggct
tcccagattgcagccgtcaaccaggcagccgatgggctgctggccagcagacacccccgc
agcccccacgtccggcagtgccaggagcagctcaacgagaggtgggagcggttcagggcg
ctggtggccgagcgtcaccgagcggtgggctcggctctgcggctcctcaactaccgcctg
gagtgcgaggagacgcggcagtggctgcagagcaaagcccgggcggtcgaggccaccgct
gagctgggacgggacttggctggcgtcttggccacccaacgcaagctctacggcatcgag
cgagagctggcggtcgccgaggagcgcctggccaccctgcgctcccaggctgacgagctg
gccaaggaacggcctgaggtggccggggaggtggccgagcagctgacagcggcggtggcc
gcgtgggacgagctgcaggcggccctgcgggaccaagcagcctctttgggtgaagccggg
cagcttcgacgcttcctgcaggacctggatgactttcaggcttggctcttcggggctcag
aaagccgtggcagccaccgacgaggtgccggtctctttggccgaggcagaggagctgctg
cagcggcacgaggctgcaaggcgggatgcggaggagcacgcggatgccttcaccaccttg
atggaagctggggagaaagtggtgggggagcagacggacccccagtatgaggggctgcgg
cagcgcctgcagggcgtggaggccggctgggctgccctgggcaggatggcagaagcccgg
caccgcttcctcatccaatgccgtggcttccaggagttcctccgtgatgctaagcaggcg
gagatcctccttaccaaccaggagtacacactgacccatctggacgtgcccaccacactg
gagggctcagctgctgccctgcgccgcttccagaacttctgtgctggcgtggagagcagc
gccgagaaggtccctgaggtggtggctggtggcaccaagctcgtggcggaggggaacatc
tttgccgagaagatcaccgagaagtgccaggccctccagaagcggcacggggacattgca
gccaaggtggaggaggcggcaggtttgcttcaggacaaccatgagctgcagaccttcctg
cagaactgccaggagcttgatgcctgggtggaggagaagatgctgacagcactggatgcc
tcttacggagaagcccgtggcctccacggcaagtggcagaagcaccaggcgttcatggcc
gagctggcggccaaccggggttggttggagaagattgagaaggaagggaaggagctggca
agtcgcaaaccgcagtacggcgaggtggtggcacggcagctggagaagctgcgggagcgg
tgggacgggctgcgccatgcgggtgaggagaagggccggcagctctttgaggccaaccgc
tcaacgctgtacgcccagagctacggggagctggagagctggctggggcaggcggaggag
gagctgcgcagcgccgagccggccaaagacctcaccgccacaaatctgcagctgaagaag
ctgacgagactggaagagcaagtgggagcgcggatgaaggagttggatgagctggaatgg
caggggccaccccttgtcagggatgagcctgatgctgatgggcatgagcagaagctccgg
cggcgattccgtgacttgctggagccgctgggcaggaggaggatggagctggagaccgcc
aaggccatgtaccaactcgggcgggatctggaggatgagacgctgtgggtgcaggagcgg
ctgcccttggcgaggtcgacggagcacggcactgacctgcagagcgtgcagtgcctggcc
aagaggaacgagacgctgcagaaggagctggcgggacacggtcctcgcctggccgaggtg
ctgaggcgcggcgaggcggcggtgagcagcaccggactgagccccgagctggaggttcgg
gcgcgggagctgcaggcactgtgggaaatgctgcgggcagagaccgccgcccggcagcag
cgcctgcgggaggctggcgaggcgcagcagtactacctggatgccagcgaggctgaggca
tggatcagtgagcaggagctcttcatgggagccgaggagaagccaaaggatgaggagagt
ggcttggtgatgctgaagagacacatccggcagcagcgatccattgaggactacggccaa
accatcaaggagctggcagggagggctcagcagctgctctctgctggccaccctgagggg
gagcagatcatccggctgcagggccaggtggacaagcactacgcagggctgaaggaggtg
gctgaggagcgccgccggcgcctggagaacatgtcccacctcttccagctgaagcgggag
gtggaagacctggagcagtggattgccgagcgcgacgtggtcgcctcctcccaggagatg
gggcaggacctggaccacgtcacgctcctgcgggagaagtttcgggagtttgcacgggac
acgggcagcgtggggcaggaacgcgtggaccgggtgaacctggccattgaggacctcatt
gacgcggggcacacggaggcggccaccatggctgagtggaaggatgggctcaatgagagc
tgggctgacctcctggagctgatcgacacccgcatgcagctcctcgccgcctcccacgac
ctccacaagtacttctacgatggtgctgagctgctgtccctcattgctgcccggcgccag
gagctgccgcaggacctgggcgaggatgctggcacagtggaggctttccaccgcatgcac
agcgccttcgagcgtgacctccagctgctggagacgcaggtgcagcagttcagggagacg
gcggcacggctgcaggctgcttacgctggcgagaaggcagccggcatccaagaacaggag
caggaggtggccagagccctgcaggcgctgctggaggcatgcagcgggcgtcgggcccgg
ctggtggacacggccgacaagcatcgcttcttcgggatggtgcgggatctgctttcctgg
atggaaagcactgtccggcagattgagacacaggagaaacccagggatgtctcctccgtg
gagctgctcatgaagtaccatcagggcatcagggccgaggtggatgcccggggcaagaac
tttactgcctgcattgagctgggcaagaagctgctgcagcgcaagcaccaggactcgccc
gagatcaaggtgaagctgatggagctggtggagaagaggagggccatgatggagacgtgg
gagcagcgctgggagcggctgcggctcttgctggaggtgtgccagttctcccgggacgcc
acagtggccgagtcatggctgatggcgcaagagccctacctggccagcagcgactacggg
cagacagtggacgcagtggagaagctgctcaagcgccatgaggcgttcgagaagtcctca
gccacctgggaggagcgcatcgccgccctgaggaagctgacgacgttggagctcatggat
gggcggacgctgcgtgatggggtgacgcatgtggagggtcccgagtaccacctggacctg
gacggggagctggaggctgggtctgaggaggaggaggagaagaggaagggcgagagcaca
caggacacctctctgcccaccaccgacggaccagagccgctggcccggacaacaggcgat
gaggagccaccgtccccaagcccacgggtgccacgggaggagcccgaggagccggccacg
ctgccagcccgcacctgcagcatccagctggagggctaccttggccgcaagcacgacctg
gaggcggccaccaagcgggcgtctaaccggtcgtggagcacacggtactgtgtcctgcgc
ggtggccagcttgccttcttcaaggatgccaagagccgggcgctggggttgccctgccac
ggtgaggagcccctggggctgcgagatgccctctgtgaggtggccgccggctacaagaag
aagaagcacgtcttcaaactcaggctcagcaatggcagcgagtggctcttccatggcaag
gatgaggaggagctgcaggcctggctgcaggggctgagctcagcaataaccgagtgccag
ggcagccggggcaaggcgcagagtctgcccctgccccccgccgcccccctgccccgcaag
gacaaggagaaacggttcagcttcttcccaaaaaagaaataa
DBGET
integrated database retrieval system
