Cuculus canorus (common cuckoo): 104064643
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Entry
104064643 CDS
T08597
Symbol
PHF2
Name
(RefSeq) lysine-specific demethylase PHF2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104064643 (PHF2)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104064643 (PHF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
PHD_4
Motif
Other DBs
NCBI-GeneID:
104064643
NCBI-ProteinID:
XP_053932384
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All DBs
Position
11:complement(22046412..22146669)
Genome browser
AA seq
1061 aa
AA seq
DB search
MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS
TLKKKRNWHKHDTGQATEVKPVQNGSQVFIKELRSRTFPSAEDIVVKVPGSQLTSEYLEE
NGFGEPILVPKKDGLGLSVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPAPANISLYERWQSAANHSEMFFADQVD
KCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKIVSL
TQFPNFETACWYMGKHLLEKFKGLHKAGQQPPAHLLQGAKILNGAFRSWTKKQALAEHED
ELPENFKPAQLIKDLAKEIRLSENASKASKADTSANTNAKEICPVEKEEAPSPVQVMPPP
PPVEKLPKKKTPKTVKTPKQLKPSKPPKPPKPPKPPKPPKTPKVKGEGKKKGKKAKESPP
PAIPNLDLLEAHTKEALTKIETPKKGKAAKNVLSVPNKETAGKQNEGEKFEVREQNKSKT
EAKWKYKNSKPDSLLKMEEEHKSEKTPLSGNKDNKFTFSFSNKKLLGSKGVKTQVNTSVF
GSLQNFKEDKAKPVRDEYEYVSDDGELKIDEFPIRRKKNTTKRELPFLSDKKDTLQHTPV
KKPKVESVSYKSDDSSDEDLLHIDTEAKPGRNSKVKKESGSSAGILDLLQASKEVGGLEY
NTNSQPPASPSTQEAIQGMLSMANLQASESCLQASWGTNQTKNNSISAQNSKKTGGGSNK
NTSKRLLKKSTKNSIDIEDYDEDQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKSS
DDAPYSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKGKKKKNTKKKL
SPNNANKPAQEGSSPEPKLESQASSLTDHEYTAGASTFGVTQPNKGSQPMAPGVFLTQRR
PSSSLPNHASAKGKRTKKGMATAKQRLGKILKIHRNGKLLL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgcccgtctattgcatctgccggctgccctacgacgtgacccgcttcatg
atcgagtgcgacgcctgcaaggactggttccacggcagttgtgtgggtgttgaagaagaa
gaggcaccagatattgacatctatcattgtccaaattgcgagaaaacccacggcaagtcg
actttgaaaaagaaaagaaattggcataagcacgacactgggcaggcgacagaggtcaaa
cctgtacagaatgggagccaagtctttataaaggagcttcgaagtcgtactttcccaagt
gctgaagatatagtcgtgaaagtgccgggcagccaactaacgtcagagtatttggaagaa
aacggctttggagagcccatccttgtcccaaagaaggatggcctgggtttgtccgtacct
gcacccacattctatgtcagcgatgttgaaaactatgtcgggccagagaggagcgttgat
gtcactgatgtcaccaaacagaaggactgcaagatgaagctcaaggaatttgtggattac
tactacagtacaaacaggaaaagggtcctcaacgtcaccaacctggagttctcggacacg
aggatgtccagttttgtagagcctccagatatagttaagaagttgtcctgggtggaaaac
tattggcctgacgatgctcttctggctaagccaaaagtcaccaagtactgcctgatctgc
gtgaaggacagctacacggatttccacatagattccggaggagcttctgcatggtaccat
gtgctgaagggagaaaagatattttatctcatcaaaccagcccctgcaaatatttctctt
tacgaacgctggcaatcggcggcaaatcacagtgagatgttttttgcagaccaagtagat
aaatgctacaaatgcacagttaagcaaggacagacgctcttcattccatcaggttggatt
tatgcaactctaacacctgtagactgcctggcctttgcaggacattttctacacagtcta
agtgttgaaatgcagatgagggcatatgaagtagaaagacgattgaaaattgtcagtctg
acccagtttccaaacttcgaaactgcatgttggtatatgggaaagcatctactagagaag
ttcaaaggtctacataaagccgggcagcagcctcctgctcatttacttcaaggagcaaaa
attctcaatggtgctttcaggtcatggactaaaaaacaggcattagcagagcacgaagat
gaactaccagaaaacttcaaaccagcacaacttatcaaggatcttgccaaagaaataaga
ttaagtgagaacgcttcgaaagccagcaaagcagacacgagtgccaacacgaatgccaag
gagatctgtcctgtggagaaagaggaggcaccatcacctgtccaagtgatgcctccgccc
ccaccagtagaaaagcttcctaaaaaaaagactcccaaaactgtgaaaacccccaaacaa
ctcaagccatccaaacctcccaaacctcccaagccacccaaaccccctaagcctcccaaa
acacctaaagttaagggagaaggcaaaaagaagggaaagaaggcaaaagagagcccaccg
ccagccatcccaaatctcgacttgctggaggcacacacaaaggaggctttgacgaagatt
gagacgccaaagaaggggaaggctgccaagaatgttttaagtgttcccaataaggaaact
gctggtaagcagaatgagggggagaaatttgaagttcgagagcaaaataaaagcaaaaca
gaagccaaatggaaatataagaacagcaaacctgattcacttctcaaaatggaagaggag
cataaatcggaaaagacccctttgtcaggaaataaggacaacaaatttacattctctttc
tccaataagaagttgcttggttcaaagggagtcaaaacgcaggtgaatacgagtgtgttt
gggtcactgcagaattttaaagaagataaagcaaaacctgtacgagatgaatatgagtat
gtgtcagatgatggtgaactaaaaatcgatgagtttccaatcagaaggaagaagaacact
acaaaaagagaactcccttttttatcagataaaaaagacactctgcagcacactcctgtt
aagaagccaaaggtggagtcagtatcgtacaagagtgatgactcgtcagatgaagatttg
cttcacattgacacagaggcaaagccagggcgcaattccaaagtaaagaaagagagtgga
agttcggcaggaattcttgaccttttgcaggcaagcaaggaagttgggggtttagagtat
aacaccaacagtcagccgccagcctcacccagcacacaagaagccatccagggcatgcta
tcgatggccaacctccaggcatcggagtcttgcctccaggcatcgtggggtaccaaccag
acaaagaataactccatctccgcgcagaactctaaaaaaacaggcgggggcagcaacaaa
aacaccagcaaacggttactgaagaaaagcacaaagaacagtattgacattgaagattat
gatgaagatcaggaccacttagatgcctgttttaaagattcagattacgtttacccttct
cttgaatcagatgaagataatccagtattcaaatcccgatcaaagaaaaggaaaagttca
gatgatgccccttacagcccaacggcacgagtcggcccctcggtgcctcggcaagataga
ccggtgcgagagggcacaagagtcgcctccattgaaactggactcgccgctgccgctgcc
aagttgtcacagcaggaggagcaaaaaggcaagaagaaaaaaaataccaaaaagaagctg
tcacccaacaacgcgaacaaaccggctcaggaaggcagctcgccagagccgaagctggag
tcacaagccagcagcctcacagatcacgagtacacagcaggggccagcacctttggggtc
acccagcccaacaagggatcacagccgatggcacctggtgttttcctcacacagaggaga
ccctcatcatccttgccgaaccatgcttccgccaaaggaaagcgcacgaagaaggggatg
gccacggccaagcagaggctcggcaagatcctgaagatccaccggaatgggaagctgctg
ctctag
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integrated database retrieval system
