Cuculus canorus (common cuckoo): 104064653
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Entry
104064653 CDS
T08597
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03018
RNA degradation
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104064653 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
104064653 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104064653 (LSM7)
03041 Spliceosome [BR:
cuca03041
]
104064653 (LSM7)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104064653 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
104064653 (LSM7)
Spliceosome [BR:
cuca03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104064653 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104064653
NCBI-ProteinID:
XP_009565307
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All DBs
Position
27:1362909..1367583
Genome browser
AA seq
133 aa
AA seq
DB search
MGSGRGAASLLAAANEMASGGGGGGGGAGKMADKEKKKKESILDLSKYIDKTIRVKFQGG
REASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGM
EAIPNPFIQQQDG
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcggccggggcgcggcgtcccttctggcggccgcgaatgaaatggcgagcggc
ggcggcggcggtggtggcggcgccggcaagatggcggataaagagaagaagaagaaagag
agtatcttggacctctccaaatacatcgacaaaacaatccgagtgaaatttcagggtggg
cgagaagcaagtggagtcttgaaaggatttgaccctcttctgaaccttgtgcttgatggt
accatagagtacatgcgagatccagatgatcaatacaaattgacggaagacacgcgtcag
ctgggacttgtggtctgcagagggacctctgtggttctcatttgtccacaggatggcatg
gaagctattccaaaccctttcattcagcagcaagatggctaa
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