Cuculus canorus (common cuckoo): 104064762
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Entry
104064762 CDS
T08597
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00562
Inositol phosphate metabolism
cuca01100
Metabolic pathways
cuca04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
104064762 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
104064762 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104064762 (SYNJ1)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
104064762 (SYNJ1)
Membrane trafficking [BR:
cuca04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
104064762 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
104064762
NCBI-ProteinID:
XP_053913739
LinkDB
All DBs
Position
1:97244826..97306209
Genome browser
AA seq
1586 aa
AA seq
DB search
MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAY
GLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRISEVR
KVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVN
LLGAKEGEHMLSKAFQSHLKASEHAADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLE
CGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTR
FQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAID
VLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKVRVCV
GTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNA
GNIVNASTTNQKLWAAELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGR
MLFSHDYIFWCGDFNYRIDIPNEEVKELIRQQNWEPLLAGDQLINQKNSGQIFRGFLEGK
INFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNV
PYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQNVYKEVIAMQGPPDGTVM
VSIRGSSAEENYFDDNLIDDLLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGT
ELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDD
YSAEVEEILPQHLQPTSSSGLGTSPSSSPRSSPCQSPTLSDGPALPVRPSRAPTKTPGPP
VSTHAEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEFG
GLGAPPSPGVARREVEAQKSPGTQRKDNLVRNQPPPSTGISSTGTAGYGTTRPTVPPRAG
VISAPQSHVRPSGGRPASETQTKPAEPPRSSPLLPEPLKPQAAGPAQPTTQPPPVLRMQE
PLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQIKTNGTFSTKLETQLNS
DPFEDLSFQQLVSKMQTSVRISPVPTLNQKELMQLPSAKQRSADILNTVNCMPAMPPVSA
FNTSQEHMRSSPNPFITGQNCTNPFTERTNAGNPFRTEMQESEKTSHILEGRAACNPFPS
LNPPSCNTSKPVFSVDASENTFCLRSKSLMVKNVQPKGWVTFDDDDDNFNVKLKPSTSVP
DFKQISSRKSAGSPDLLGTEQNTFLGSEFNFDNDWNKSSTDCFYTMPARRPPAPPIPSRI
TSNRSPADPFTSLAPKVSPTQDFTER
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagtaaaggataccgtgtctatcacaagctggatccacttccattcagtgtg
atagtggaaaccagaaacagagaagaatgtctcatgtttgagtctggagctgtggctgtc
ctctcttctgcagaaaaagacacaatcaagaatacctactcaaaagtaatggatgcatat
ggcctcttgggtgtattaagattaaaccttggagacacattgttacactatctggttcta
gtaacagggtgcatgtctgtgggaaagattcaagactctgaagtttttcgagtgacttcc
actgaatttgtgtcattacgaattgattcaacagatgaagatcgtatttcagaagtgcgc
aaagttttgaactcgggaaacttttattttgcatggtctgcaactggtgtcagtttagat
cttagtctcaatgctcaccgcagcatgcaggagcacaccactgacaataggtttttctgg
aaccagtcactgcatttacatctgaagcactatggtgtgaactgcgatgactggttgtta
cgtctcatgtgtggaggagtggagataaggacaatttatgcagctcacaagcaggcaaag
gcttgtctcatttcacgactaagctgtgaacgggctggcaccagatttaatgtccgggga
acaaacgatgatggtcatgttgctaattttgttgaaacggagcaggtgatatatttagat
gactctgtgtcgtctttcatacaaattcgaggatctgttccattattttgggaacagcca
ggcctgcaggtgggatcccatcgtgtcagaatgtcaaggggttttgaagcgaatgcacca
gcttttgacaggcatttccaaactcttaaaaatttatatggcaagcaaattattgtaaat
ttacttggggcaaaagaaggagagcatatgctcagcaaagcttttcagagccatttgaaa
gcatccgaacatgcagctgatatcaaaatggtgaactttgactatcatcaaatggttaaa
ggtggaaaggcagaaaaactacacagtgtgcttaaacctcaagtccagaaattcttagag
tgtggatttttttactttgatggaaaggaggttaaaagatctcaaagcggtactgtcaga
acaaactgcttggactgtctggatagaacaaacagtgtgcaggctttctttggcttagag
atgctaacaaaacaactggaggtattaggattagctgagaagcctcagttggttactcgc
tttcaggaagttttccgatccatgtggtctgtgaatggtgattctgtcagtaaaatttat
gctggaactggagcccttgaaggaaaagctaaggctggaaagctgaaggatggtgctcgt
tctgtgaccagaacgattcaaaataacttttttgatagctccaagcaggaggccattgat
gttttgttattgggaaataccctaaatagtgatttagcagataaagcacgggctctctta
accaccagcagtttacgcgtttcagagcaatcattacaatcagcatctgtaaaagtgcta
aagagtatgtgtgaaaacttttacaagtatgcaaaaccgaaaaaagttagagtctgcgtt
gggacatggaatgtcaacggggggaaacagtttagaagtattgcctttagaaatcagacc
ctcactgactggcttctagatgcaccaaagttagctggcattcatgaattccaagatcga
aaaagcaagcctgtagacatatttgctattggatttgaagaaatggtggagctaaatgca
ggaaacattgtgaatgccagcacaaccaatcagaagctctgggctgctgaactgcagaag
actatatcaagagataacaagtatgtgctgctggcttctgaacagttggtgggtgtctgc
ctttttgtgttcatcaggccccagcatgctccttttatcagggatgttgctgttgatact
gtaaagactggcatgggaggagccactggtaataaaggcgcagtagcaattcggatgttg
tttcatacatccagtctttgctttgtctgcagtcattttgctgcagggcaatcacaagtt
aaagagagaaatgaagacttcgtagaaatagctcgcaagctcagttttccaatgggaagg
atgctattttcccatgactatatcttttggtgtggtgactttaattatcgaatagatatt
cctaatgaggaggttaaagagctaatacgacaacagaactgggaacccctattagcagga
gaccaacttatcaatcagaaaaattctggacagatttttaggggatttttggaagggaaa
ataaattttgctcctacgtacaaatatgatctgttttctgatgactatgacaccagtgaa
aaatgccgcacaccagcatggacagatcgtattctttggagaagaagaaaatggcctttt
gaccgatcagctgaagacctggatcttctgaatgctagttttcatgacgacagtaatgtc
ccttatacgtggaatcctggtactttgttgcactatggaagagcagaactgaaaacatct
gatcataggcctgtggttgcattaattgacattgacatatttgaaattgaagcagaagag
aggcaaaacgtttataaggaggtgattgcaatgcaaggaccacccgatggtactgtcatg
gtctccatcagaggttcttcagcagaagaaaactattttgatgataacttgattgacgat
cttcttcaaaaatttgcaagctatggtgaagttatacttataaggttcgtggaggacaag
atgtgggtaacatttctagaaggaagctctgctttgaatgttatgaatttgaatggtact
gagctactaggaaggattataaacataagcttaaaaaatccagattggatcagaagcttg
gaagacgaaatgaatctagagaaaattaatattgggctgccttcatcaacaagctccact
ttgctttgtgaagatgctgaggttactgcagactatgatatggaaggagacatcgatgac
tacagtgctgaagtagaagaaatccttcctcagcacctacagccaacttcaagctctggt
cttggaacctcaccaagctcttccccacgttccagtccctgtcaatcccctacgctgtca
gatggacctgcgcttccagtgagaccaagccgagcaccaacaaaaactcctggaccacct
gtttccacgcacgctgaatttcagcttggtacccagcagaaagagtcttctcagagcttg
gagccaaagcgtcctccaccccctcgtcctgttgctcctcctgcacgccctgctccgcca
cagaggccacctccaccatcaggcggtaggagtcctgcacctgctagaaaagaatttgga
ggtcttggagctcctcccagtcctggggtagctaggagagaagtagaagcacaaaaaagt
cctggaacacaaagaaaagataacttagttcgtaatcagcctccaccttcaactggaatt
tcaagcacaggaactgctggatatggtacaaccagaccgactgttccacctcgagctgga
gttattagtgcaccacaaagccatgtccgcccttcagggggaagaccagcatctgaaact
caaaccaaaccagctgaaccgccaaggagctcaccattgcttcctgaaccactgaagcct
caggctgctggacctgctcagcccaccactcagccaccgcctgtgctgaggatgcaggag
cctctgatacctgtggcttcacatccatctcagacaagtgccccacaaagtctggaaccc
ccacaaccgcctcctcgtagccgatcatctcacagtttgccttctgaatctgcaccttca
cagcagcaaattaaaacaaatggaacgttcagcactaaacttgaaacgcagttaaacagt
gacccttttgaagatttgtcatttcagcagcttgtgtcaaagatgcagacgtctgttcga
atatcacctgttccaactttaaaccaaaaggagttgatgcaattgccttcagcaaaacaa
agaagtgctgatattttgaatactgtaaattgcatgccagcaatgcctcctgtttcagcc
tttaacacatcccaggaacatatgcgcagctctccaaatccatttattactggacagaac
tgcacaaatccattcactgaaagaactaatgctggaaacccatttagaacagaaatgcaa
gagtctgaaaaaacttcacatatactagaaggacgtgccgcttgcaatcctttcccttct
ctaaatccccccagctgtaatacaagcaagcctgtattttccgttgatgcatctgaaaac
actttttgcttgcgaagtaaatctctcatggtaaaaaatgtacagccaaaaggatgggta
acgtttgatgacgatgatgataattttaacgtaaagctaaagccatctacaagtgttcca
gattttaagcaaatcagttccaggaagtcagctggatctccagatttgctgggcactgaa
caaaatacttttcttggttcagagtttaactttgataatgactggaataaaagttctact
gattgcttctatacaatgccagcaagaagaccacctgcacctcctataccatcaagaata
accagcaacagatcccccgcagatcctttcacttctttggcacctaaggtgtcaccaaca
caagattttacggaaagatag
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integrated database retrieval system
