Cuculus canorus (common cuckoo): 104064823
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Entry
104064823 CDS
T08597
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104064823 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cuca01009
]
104064823 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104064823 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
cuca03029
]
104064823 (RB1CC1)
Protein phosphatases and associated proteins [BR:
cuca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104064823 (RB1CC1)
Membrane trafficking [BR:
cuca04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104064823 (RB1CC1)
Mitochondrial biogenesis [BR:
cuca03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104064823 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
DUF5959
Motif
Other DBs
NCBI-GeneID:
104064823
NCBI-ProteinID:
XP_053913353
LinkDB
All DBs
Position
2:42649836..42721346
Genome browser
AA seq
1597 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRRSYRECLGRLDSSAEHKGEESEETEDGKSP
ELVLCSDISKVNNKSMLASFCKSVERTALERRDPENVEDKESDQNAAVQDNETSVELKDD
DQPSFNVSLLDWINAQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQ
LMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTEL
LERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESFG
KLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDNELPDISLSDLQFLQSFCPSEVQPLLRV
PILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRIEST
TGTAIATSSRTPPSLSLQGPLCPPVCPPVPLEELSPDSIDAHTFDFETIAHPNLEQVLKQ
GSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDTISCVKDVSVENASLSACMEKCKFIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSNS
LKCTSLEIVSTIEKVKLSLEETLKDKHQKELQSLKSEYETKINKLVEDSEESKKKIKKLK
GDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNCEIKELRQSRE
IVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELENNLQAKHLQEFEKVLAEHEDCLDK
LKKENQHRLEQMQESHAVVMQEKQKQVEELQIKVSDLSDLRCKLEVELALKEAETDEMKL
LLEESRNQQQETLKFQIEKETENLKKEIDKLNNKIQINSDEYQVGLSELRTLMTIEKDQC
ISELVNRYEEESNLLRTELNKVTILHQKTSEAEKRLSVQITELQSKLELEVNALEKEKTE
KLSLCEQQEKYEAVIRKLKEENELLVSNQEQDRQLLIQKLSCEKEDAVRTACKEIELQRK
AAEKGLLEKIQQLEMQVTQSPPTESSAESSLVAELQEKLQEEKMKFLEQLEEQEKRKNEE
MQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDRLKMLTQQQEKDKDLIETLSEDRA
RLLEEKKKLEEEVNKLRSSNFSPSTYSAAASEVCGACAADFPTDTERLVSDIAAEGRMDS
TMETSMMAVHENVHMSEEKQRIILLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIA
IRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVLG
KVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttctggtcaacactggaactacccttacctttgacacagaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaactaagtacaagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagatagaagagtgtgt
agttacagtgctggaacagataccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctctaatgatgcctgcagtgtttcatacggtagcatcacggacacaa
cttgctgtggaaatgtatgaggttgctaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttaccaaaaactgcttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagatgatatcaagttgaaacttacacacttgggttccgctgtttctattatggcc
aagataccactgctggagtgcctaacaagacgtagttacagagagtgtttaggaagactg
gattcttcagctgagcataaaggggaagaaagtgaagaaactgaggatgggaaatctcct
gaattggtgctttgttctgatatatctaaagtgaacaataaatcaatgttagcctcattt
tgcaagtcagttgaacgtacagctttggaacgcagagatcctgaaaatgtagaagataag
gaatctgatcaaaatgctgctgtccaggacaatgaaacatcggtagaattgaaagatgat
gatcagccttccttcaatgtttctttgttagactggataaatgctcaagacagacctaat
gatgttgaatctctggtcagaaaatgttttgattctatgagcaggcttgatccaaggatc
atccagccatttctggcagaatgtcgacaaactattgccaaactagataatcagaacatg
aaggctattaaaggccttgaggatagactctatgcattggaccagatgatagcaagctgc
agcagactggtaaatgaacaaaaagaacttgctcagggatttttggctaatcagaaaaga
gctgagaacttgaaagatccttctgtgcttcctgatttgtgtttgagtcatgcaaatcag
ctaatgattatgttaaccaatcacagaaaactgttagatattaaacagaaatgtaccact
gccaaacaggagcttgcaaataatctacaagtcagactcaagtggtgttgttttgtaatg
cttcatgctgaccaagatggagagaaactacaagcattgcttcgtcttgtaacagagctg
ctagaaagggtcaaggttgtagaagctctcagtactgttcctcaaatgtactgtctagct
gttgttgaggttgtgaggaggaaaatgttcataaaacactacagggagtgggctggtgct
ttaataaaagatgggaaacacctatacgaagctgagaaggcaaaaagggaatcttttggt
aaactgttcaggaagtctttcctaaggaatcgtttgtttagaggacttgattcctggcct
ccatcgttttgtacacgaaaacctcgaagatttgacaatgaacttccagatatctcatta
agtgacttgcagtttttgcaatctttttgcccttcagaagtacagccattactcagggtt
cccatactttgtgactttgaacctcttcaccagcatgtacgtgctctgcataacctggta
aaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaacaa
aaggcctccaatagtcaagcatcgccacaatctgctaccacaccaagaatagaaagtaca
acaggaactgcaattgctacctcttcaagaactcctccatcactgagtcttcagggtccc
ctgtgtcctcctgtgtgtcccccagttccattagaagaattgtctccagacagcattgat
gcacatacatttgattttgaaactattgcccatccaaacttggagcaagttcttaagcaa
ggatcattagacttggattcattagcagaaagtccagaatctgactttatgtcagcagta
aatgaatttgtaatagaagaaaatccagtatctcctaatgtaataagtgacccacaaagt
ccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtagacgt
atgcaagatacaatttcttgtgtaaaggacgtttcagtagaaaatgcatccctcagtgct
tgtatggagaaatgtaaatttattgcccaagattcaaaggtacatttaagaggtataaaa
gaagatctttgccactttagaacacttgtacaaagagaacagtgtgacttttctaattct
ttaaaatgcacttcgttagaaatagtaagtactattgagaaagtaaaactttcacttgaa
gaaacactaaaagataaacatcaaaaagaattgcagtctttgaaaagtgaatatgaaact
aaaattaataaattagtggaggatagtgaagaaagtaaaaagaagattaaaaagttaaaa
ggggacttattaggccttgaggaagttcttcaaaataagaatgatgaatttgcaatcgtg
aaaaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattacttgaa
ttggaatgccaaatggagacacaaaattgtgaaattaaggaactgagacagtcacgcgag
atagtacttgaagacttgaaaaaacttcatgttgaaaacaatgaaaaactacaactcctg
agggcagaacttgagagtttggagcaaagccatttaaaagaactggaaaacaacctacaa
gccaagcatttacaggaatttgagaaggtgctagctgagcacgaggactgtttagataaa
ttaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgctgtagttatg
caagagaaacaaaaacaagtagaagagttacaaatcaaggtttcagatctgtctgatttg
aggtgcaaattagaagttgaacttgccctgaaagaagcagaaactgatgaaatgaagctt
cttttggaagaaagcagaaaccagcaacaagagacactaaaatttcagattgagaaggaa
actgaaaacttaaaaaaggagatagataaattaaacaataaaatacaaattaacagtgat
gaatatcaagtgggcctgtcagaactaaggactctcatgacgattgagaaagatcagtgc
atttctgagctagtaaacagatatgaagaagaatcaaatttgcttagaactgaactaaat
aaagtaacaattcttcatcagaaaacttctgaggcagaaaaaagactttcagtgcaaata
acagaactacaaagtaagttagagttggaagtgaatgccctagaaaaggaaaaaacggaa
aaattgtccctctgtgagcagcaggaaaaatatgaagctgttatccgcaagcttaaggaa
gagaatgaactgttagtatctaaccaagaacaagacaggcagttgctcattcagaagctc
agttgtgaaaaagaggatgcagtacgaactgcttgtaaagagattgagttacagaggaaa
gctgctgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtaactcagagt
cctcccactgaatcatctgctgaatcaagtttggttgctgaacttcaagagaagcttcag
gaagaaaaaatgaagttcttggagcaacttgaagaacaagagaaaagaaagaatgaagaa
atgcagaacatcagaacttcacttactgcagaacagcagactaactttaacactgttctg
gcaagagagaaaatgaaaaaagaaaatataattaatgatcttagcgacagattaaaaatg
cttacacaacagcaggaaaaagataaggatttgatagaaacactttctgaagatcgagct
cgcttacttgaagagaagaagaaacttgaagaagaagttaataaactgagaagtagtaat
ttttctccatcaacctattcagcagcagcttcagaagtttgtggagcctgtgcagctgat
tttcccactgacacagaaagattagtttccgacattgccgctgaagggagaatggactcc
acaatggaaaccagtatgatggctgtgcatgagaatgttcatatgtctgaagaaaaacag
aggataatattgttagaaagaactttgcagttaaaagaagaggaaaataagagattaaat
cagagattgatgtcccagagcatgtcatcggtatcttcaagacattctgaaaaaatagca
attagagattttcaggttggtgatttggttctcattatcttggatgaaagacatgacaac
tatgtactatttactgttagtccaaccttgtatttcttgcactcggaatctcttgctgca
ctggatctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtgctagga
aaagtgatggaaaaggagtactgtcaggcaaaaaaggcacaaaacagatttaaagttcct
ttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
