Cuculus canorus (common cuckoo): 104064829
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Entry
104064829 CDS
T08597
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104064829 (DENND4C)
Membrane trafficking [BR:
cuca04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104064829 (DENND4C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Ty3_capsid
Motif
Other DBs
NCBI-GeneID:
104064829
NCBI-ProteinID:
XP_053910489
LinkDB
All DBs
Position
Z:24774424..24843537
Genome browser
AA seq
1951 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTATLPDQEISRHETKSAGPKAPITDIAVIIKSAGETVP
EGYTCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKERIISGCEVI
QATPYGRCANVNNSSASSQRIFITYRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKV
DKNLNCGMWGSSVYLCYKKSVPASNSLAYKAGLIFRYPQENYESFPLSESVPLFCLPMGA
TIECWDSQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQSQLGLLTPVE
RKVVTSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKYISHFMHNIPF
PSPQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKI
LLHSLRPAVLTGVAEAVAAMIFPFQWQCPYIPLCPLSLATVLSAPVPFIVGVDSRYFDLY
DPPQDIVCVDLDTNMVYISDDKKSTSWKQFPKKPCKSLLSTLKKLHPQLAAVHRKTQEGS
AVEMTPIEADFSWQKKMIELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSL
FDHQGFLKSRDRAYMKFYTHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFSDKGT
ERGEKVDVDSVEDVRLIELDESQKSEHTVFIMPPEPSADDGQDRVPKYSYKSFPRLDFKL
FDRPQELKLSFSRHPAGSSISNSPALMAKRTKQEIKTAHKLAKKCYVSPPQWAKCLFSHS
YSLWFICLPAYIRVAHPKAKALQQAYDVLIKMRKTDVEPLDEVCYRVVMQLCGLWGQPVQ
AVRVLFEMKNAGIQPNAITYGYYNKAVLESPWPSSNRSGIFLWTKVRNVVRGTAQFRQCL
KKSAQSPRVPVISVLRSTTGGSDGDMVSHGSVDSSNDANSGEHTLFVSDLVRLDSIDNHS
STGGQSDQGYGSKDELLRDGDSLHATETQVEKDTTTAEGLIGEVCTEKSDEKQQLNIETH
NPTDLPSWGNSIVKVPSGIFDSSGRRSSDETGSSPLFITQDSVEDVVFGDVSPKKTSEKG
QKRQKLFSERSCSFSSEGRAGMLLKKGSLDLHSKEMAVMMGADAKILTAALSGAKTSPCR
TNKSHSFESTVDQQVSGISGTWSCVTESSWELEHRSSPVLEEPGEGQEHLENGRDENMTT
VEDVNLEQSAESQIKKPQSKDATAKRNSFYGVVKPIEREDVEVGLDPLSLLATDSMQPRH
PEPEEKLVSPVAARNLADEIESYMNLKNPLGSKFPSMELHEPNREAEASGIFGHSQERRS
SLPLDPVLPPSESYENRRSPSVSRSKTFTGRQKQQTHPRVQKERSSSLTGLGRSSPHGSL
GSVVTTLSNLKLDNILSGPKMDVLKSGMKQAANVASKMWGVVTSAYSYSDDEAKNNRLDF
HFPTGFEDNILGDTMSSRTGVPGLITNELAQSTTSLGSSSSSGDTGRQHYNAGEVSFPRS
MKVADSEKSEQSSSHNTSLSSIFQNYAMEVLMSSCSQCRACGALVYDEEIMAGWTADDSN
LNTTCPFCKSTFLPLLNVEFKDLRGSASFFLKQSTSGDSLQSGTLPLTTDPLEQKLLSSP
AVADLISFSDHPQSSHTIAEETSSAAEQRDVAEEQIKDPRTMKTSASNPPKRGVSLTRSH
SVGGPLQNIDLSQRPSHGISTVSLPNSLQEVVDPIIKRPNPLPVSVPYLSPLVLRKELES
LLENEGEQVIHTSKFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNDGVQLPLSSL
AQDSKLVYIHLLWDNINLHQEPGEPLYMSWRNLNSSEKRPSTLTEDQQAIHALLENIKLS
IQHNDVDKPISLLLQKVKPDVKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRLAHKKL
PKDVLEKMQKIDAPPSSRVECCRKCFGAPLI
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagataaaggtccacgagtggctgactattttgtagtggcagggctcactgat
acagatactgcaacgctcccggaccaagaaataagccgacatgagacaaagtcagctggt
ccaaaggctccaattaccgacattgctgtgataattaaatcagctggtgaaactgtccca
gagggatacacttgtgttgaagccacccctacagcccttcaagccaacttaaattatgga
agtctaaaaagtcctgagctttttctttgctacaagagaggccgggacaaaccacctctt
actgacattggagttctatatgaagggaaggaacgcatcatttcaggctgcgaggtcatt
caagctactccctatggtcgttgcgctaatgttaacaacagttcagcttcctctcaacgg
atctttatcacatatcgaagggcacctccagtacgacctcaaaattcattggcagtgaca
gatatctgtgttattgttaccagcaaaggagaaacccctcctcatacattctgcaaagta
gataagaatttaaattgtggtatgtggggctccagtgtatacctttgttacaagaagtct
gtgccagcttctaactctttagcatataaagctgggttaattttcagatatcctcaagag
aactatgagtcattcccactgtcggaatctgtacctctcttctgccttcctatgggagct
actattgagtgctgggactctcaaaccaaatatccactcccggtgttctcaacttttgta
ctaacctgctcttctgcagaaaaggtttatggtgctgctattcagttttatgaaccttat
ccccgggagctgctaacagaaaaacaacagtcgcagctgggtctcttgacacctgtggag
aggaaagtggttacttctaagtccatcaattccaacaaatgcatctgccttctttcacac
tggcctttctttgaagcatttcgaaaatttcttatgttcatctacaaactctctgtctct
ggacctcaccctcttcccattgaaaagtacatatcacattttatgcacaatatacctttc
ccttcaccacaaaggccaagaattcttgtgcagctttctgcccatgatgcattaatattg
tctcagccagtttccacaccattgccattaagcggagcgaacttcagcactctgctcatg
aatcttggaccagaaaactgtgccactctattactgtttgtgttgctagaaggcaagatc
ctcctccattctcttagaccagctgtgttgacaggagttgctgaagctgtagcagctatg
atatttccatttcagtggcaatgtccatatatccccctctgtcctttgtctctggccacc
gtactcagtgcacctgttccatttattgttggagttgattcacgatactttgatttgtac
gatccaccacaggatattgtgtgcgttgacttagacacaaatatggtgtacatatcagat
gataagaagagcaccagttggaagcagtttcctaagaagccatgtaaaagtctgctcagc
accttgaagaaactgcacccacagttggcagccgttcacaggaaaactcaagaaggctct
gcagtggagatgactcctattgaggcagatttctcctggcaaaaaaagatgatagaactt
gaaatggagatacaagaagcttttctgcgtttcatggcatctattttaaagggttacaga
acattcctcaagccaatcacacaggcgccttcaaataaagcaacggctgctgattccttg
tttgatcatcaaggatttttaaagagcagagaccgtgcctatatgaagttctacacacat
ctcaccaaaacacagatattcagccgctttatcgaggagtgcagttttgtgagtgacaag
gatactggcttggcattttttgatgactgcatagaaaagctcttctcagataaaggaaca
gaaagaggagagaaggttgatgtagattctgttgaagatgtacggttgattgaacttgat
gagtctcaaaaaagtgaacacacagtgttcataatgccaccagaaccttctgctgatgat
ggacaggaccgagtgccaaaatacagttacaaaagcttcccacgactagatttcaagctc
tttgacaggccacaggagctcaagctttcattcagcagacacccagctggaagcagcatt
tcaaatagtccagcgctcatggcaaagaggacaaaacaggagataaaaacagctcataaa
ctagccaagaagtgttatgtaagccccccacagtgggctaagtgtctcttcagtcatagt
tacagcctatggtttatttgtctgccagcctacatcagagttgcacatcccaaggccaaa
gcacttcagcaggcatacgatgttctaattaaaatgaggaaaactgatgtggaaccacta
gatgaggtctgctacagagttgtaatgcagctctgtggactgtggggtcagcctgttcag
gcggtgagagtcctctttgagatgaaaaatgctggaatacagccaaatgccatcacctat
ggttattacaataaggcagttttagagtctccttggccaagcagtaaccgcagtggcata
ttcctgtggacaaaggtacgaaatgtagtccgtggcacagcacaatttagacagtgctta
aagaagtcagcgcagagcccacgagtacctgtgatatcagttctgcggagtaccacgggt
ggaagtgatggggacatggtgagccatggtagcgtggatagttctaatgatgctaacagt
ggggagcacactctcttcgtcagtgacttagtcaggcttgattccattgataatcactct
agcacaggtggccagtcagaccagggctatggatccaaggatgaacttctaagagatggg
gatagtcttcatgcaactgaaacacaagtagagaaagatactactacagctgaaggccta
ataggagaggtttgtactgagaaatctgatgaaaagcaacagctgaatatagaaactcat
aatccaacagacctaccttcttggggtaacagtattgtgaaggttccatctggcatcttt
gatagcagtggaaggagaagcagtgatgaaactggttctagcccactgttcataactcag
gattcagttgaagatgtagtctttggtgatgtttctccaaagaaaacaagtgaaaaagga
cagaagaggcagaaactgttttcagagagaagctgcagtttcagcagtgaaggcagagca
ggaatgctgctaaaaaagggcagcttggacctacattctaaagaaatggccgtaatgatg
ggagcagatgccaagatcttaacagcagctttatctggggccaagacttcaccctgtcgt
accaataagtcccacagctttgaaagtactgttgaccagcaggtttctggcataagtggc
acttggagttgtgtgactgagagtagttgggaattggagcataggtcttcaccagtgctg
gaagaacctggggaagggcaggaacatcttgagaatggaagagatgaaaacatgacgaca
gtggaagatgtgaaccttgaacaatcagctgagtcccaaatcaagaaaccacaatccaaa
gatgcaactgctaaaaggaatagcttttatggagtggttaagcctattgaaagggaagat
gttgaagtaggcttggaccctttatctctgctggctactgacagcatgcaaccaaggcat
ccagaacctgaggaaaagttggtgtcaccagttgcagcacgcaatttggcagatgaaata
gagagctatatgaatctaaagaaccccttgggtagtaagtttcccagcatggaacttcac
gagccaaacagggaagcagaagcctctggtatatttggtcattcccaagaaagaaggtca
agtctgcctttggatcctgttcttccaccttctgagtcttatgaaaatcggagaagtcct
tctgtctccagatccaaaacattcactggacgacaaaagcaacaaacccatccacgagtt
caaaaggagcggtcttcatctttgacaggactcggtcgctcttctccacatggctcatta
ggatctgttgtaacaactttatccaatctgaagttagacaacatactttctggaccaaaa
atggacgttctgaaatcaggcatgaaacaggctgccaatgtggccagtaagatgtgggga
gttgtaacttcagcatatagttactcagatgatgaggcaaaaaacaatcgtctagacttc
cacttcccgactggttttgaagataatattttaggagatactatgtcatcaagaactgga
gtcccagggttaattacaaatgagcttgcacaaagcactactagtcttggcagtagtagt
agcagtggagatacaggaagacagcattacaatgcaggtgaagtttcattcccaagaagt
atgaaagttgcagattctgagaagtctgagcaaagctcttcacataatactagtttatcc
agcattttccagaactatgccatggaggtattgatgtcaagctgctctcaatgtagagct
tgtggtgctttggtttatgatgaagaaattatggctggatggacagcagatgattcaaac
ttgaacactacctgtcctttctgcaaaagtaccttcctacctctacttaatgttgaattt
aaagacctacgtggctctgcaagctttttcctgaagcaaagtacctcaggagacagctta
cagagtggtacccttccattaactacggatcccctggagcagaaactgttgtccagtcca
gctgttgctgacttgatcagtttttctgatcacccacagtccagccacaccatagctgaa
gaaactagctctgcagctgagcaacgtgatgtggcagaagaacagattaaagatcctaga
accatgaagacatctgccagtaatccaccaaaaaggggtgtgtccttgactcgaagtcac
agtgttggaggtccgctgcaaaacattgatctttcccagagaccgtctcatggcatttca
acagttagtcttccaaatagcttgcaagaagttgtggatcctataataaaaagacctaac
cctctccctgtatctgtaccctacttgagccctttggtactgcgtaaggaacttgagtcg
ctattggaaaatgaaggagagcaagtaattcatacatccaaattcattaatcaacaccct
ataattttctggaacctagtctggtatttccgacggctggatctacctagcaatttacct
ggcctcattttaacatctgaacactgtaatgatggagtgcagcttcccttgtcatctctt
gctcaagatagcaagctagtgtacatccatcttctgtgggacaatatcaacctccaccaa
gagccaggagagcccttgtatatgtcttggagaaatctcaattcatctgagaagagaccc
tcaacgttaacagaagatcagcaggcaatacacgctttgttggagaacatcaaactaagt
attcaacacaatgatgttgataaaccaatcagcctcctcctacagaaagttaaaccagat
gtgaaacgacagaggagtttttacagagaaattcttttcctgtctctggtgtctcttgga
agagagaatattgacattgaggtctttgatagtgaatacaggcttgcgcataaaaagcta
ccgaaggatgttcttgaaaagatgcagaaaatagatgctccaccaagcagcagagttgag
tgttgtaggaagtgctttggagcacctttaatataa
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