Cuculus canorus (common cuckoo): 104064942
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Entry
104064942 CDS
T08597
Symbol
ERI1
Name
(RefSeq) 3'-5' exoribonuclease 1 isoform X1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104064942 (ERI1)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104064942 (ERI1)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104064942 (ERI1)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
104064942 (ERI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
104064942
NCBI-ProteinID:
XP_053920563
LinkDB
All DBs
Position
4:complement(47846092..47876706)
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AA seq
337 aa
AA seq
DB search
MEEQKGKGPRAAPSEAPPAAAARPPSRQRCSISDEETNGKNSTASLNDFSDPVYKEIAVT
NGYINRMSRDELRSKLEEFKLETRGVKDVLKKRLKNYYKKQKLMQKEAINGGGYYDYICV
VDFEATCEEGNPPEFIHEIIEFPIVLLNTHTLEIEDTFQQYVKPEINPKLSNFCISLTGI
TQDIVDKADTFPQVLQNVIEWMRQRELGTKYSYSMLTDGSWDMSKFLNIQCRNSRIKYPS
FAKKWINIRKSYGNFYKVPRNQTKLTAMLENLGMNYDGRPHSGLDDSKNIARIAIRMLQD
GCELRVNEKMHAGQLMTVSSLAPLEGAPAPLMPRYRN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagaaagggaagggcccgcgggcagcccccagcgaggcgccgcccgccgct
gccgcccgcccgccgagcaggcagcgttgtagcatcagtgatgaagaaactaatgggaaa
aattcaactgccagtttgaatgacttcagtgaccccgtttacaaagaaattgctgtaacc
aatggttacatcaacagaatgtccagagatgagctcagaagtaaacttgaagagttcaag
ctggaaaccaggggagtgaaagatgtgctgaaaaagagactgaaaaactattataagaaa
cagaagctgatgcagaaggaagccattaatggaggcggctactatgactacatctgcgtt
gttgactttgaagcaacgtgtgaagaaggaaacccacctgaattcatacatgaaataatt
gagtttcctattgtcttactaaacacacatacactggaaatagaggatacttttcagcaa
tacgtgaagccagaaattaatcctaagctttcaaacttctgcatcagtctgacaggaatc
acccaggacattgttgataaagctgatacatttcctcaagttctgcagaatgtcatagaa
tggatgagacagcgagaactgggaacaaagtacagctattccatgttgacagatggatct
tgggatatgagtaaatttttgaacatccagtgccgtaatagccgtatcaaatacccttct
tttgccaaaaagtggatcaatattcgcaaatcatacgggaatttctataaggttcctagg
aaccagaccaagctgacagccatgcttgaaaacctgggcatgaattacgatgggagacct
cacagtggacttgatgactctaaaaacattgcaaggatagctataaggatgctgcaggat
ggctgtgaactgcgggtgaatgagaaaatgcatgctggacagcttatgacagtctcctcc
ttagcccccttagagggagcccctgctccactcatgccccgctacagaaactag
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