Cuculus canorus (common cuckoo): 104064975
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Entry
104064975 CDS
T08597
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104064975 (DDX52)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104064975 (DDX52)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
90S particles
Helicases
104064975 (DDX52)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104064975
NCBI-ProteinID:
XP_053941312
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All DBs
Position
20:1334674..1344241
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AA seq
616 aa
AA seq
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MEAQELFRRLGAGARFDVRRFGEDAKRFGVIKGSGSSISLESLDFFGHKEGAPLGSAEES
GELVQVKGKEQEDGGAGRNAGEAAGKRKRTAESSKGKRKMKKTRALIPELSESNGIKWMS
SMEAKFEDAKDKKPTAEKLERLRREKINRFRNRHKISVQGTDLPDPIATFDQLQKEYKIH
PKIMENVQAAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLAHLKQPRNK
GFRALIISPTRELASQTYRELVKLSEGTGFRIHMIHKATEAAKKFGTKSSKKFDILVTTP
NRLIYLLKQDPPAIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHLVRRAMFS
ATFARDVEEWCKLNLDSVVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAP
PVLVFVQSIERAKELFHELIYEGINVDVIHAGKTQQQRDKVVHSFRSGKIWVLICSALLA
RGIDFKGVNMVINYDLPTSAVEYIHRIGRTGRAGHRGKAVTFFTEDDKPLLRSIANVIQR
AGCPVPDYIKHLPKLQSKEKKRLVKKPLTRESICTTPQCFLKKGKRKMKTTKENIKEKKK
VKEDKTSSKLQTVSKS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcaggagttgtttcggcgcttgggggccggtgctcgcttcgatgtgcggcgg
ttcggggaggacgccaagcgatttggggtgataaagggcagtggcagcagcatctcgctg
gagagcctcgacttctttgggcacaaggagggagcccccctgggatccgctgaggagagt
ggggagctcgtacaggtaaaaggtaaagagcaagaggacggtggagcagggagaaacgct
ggagaggcagcaggaaagagaaaaagaacggcagaaagcagcaaagggaaaagaaaaatg
aaaaagacgcgagcgttaataccagagttgtcagaaagtaatggaataaagtggatgtct
tctatggaagcaaaattcgaggatgcaaaagacaaaaaacctactgcggaaaaacttgag
cgcttgagaagagaaaagataaaccgttttagaaatcgacacaagattagcgttcaagga
accgaccttcctgaccccattgccacgtttgatcagcttcaaaaggaatacaaaatccac
cctaaaatcatggagaacgttcaagctgctggcttccaggtcccaacgcccatccagatg
caggctattcccgtcatgcttcatggtcgggaactcctagcttcagctcctactggctct
ggaaaaacactggccttttgtattcctctcttagcacatttgaagcaacctcgtaacaaa
ggattcagagctctaatcatatcacctacccgagaacttgctagccagacctatcgggag
ctggtgaagttgtctgaggggacaggcttcagaatacatatgatccacaaggcaactgaa
gcagctaagaagtttgggaccaagtcttctaagaaatttgatatactagttactactcca
aacagactcatttatttgctgaaacaagatcctccagcaatagacttgaccagtgtagag
tggctggtggtggatgagtcggacaaactgtttgaagatgggaagtcggggttccgagac
cagctggcctctatcttcctggcatgcacgtcccacttggtgagaagagccatgttcagc
gcaacctttgcacgcgatgtggaggagtggtgtaagctcaacctcgacagcgttgttctg
gtgtctgttggagcaaggaactctgcagcggagacagtagaacaagaactattgtttgtt
ggatctgagacaggaaaactaacggcaatgagagagcttgttaaaaagggctttgctcct
ccggtccttgtttttgtgcagtctattgagagggctaaagagcttttccatgaacttatt
tatgaaggcatcaacgtggatgtcatccatgcaggcaaaactcagcagcagagagataaa
gtagtgcacagtttcagatctgggaagatctgggtgctcatctgctcagccttattagcg
cgagggattgacttcaaaggagtgaacatggtcattaattatgatttgccaacgagtgca
gtggagtacatccacaggataggtcgtactggaagagcagggcacagaggaaaagcagtc
actttctttacagaagatgataaacctttattacggagcatagccaatgttattcagcga
gctggctgtcctgtgccagactacataaaacacttgcccaagctgcaaagcaaagaaaag
aagagattagttaagaaaccattgacaagagaatccatttgtaccactcctcagtgcttc
ttaaaaaaaggcaaaagaaaaatgaaaactacaaaggagaatattaaggagaaaaagaag
gttaaagaagataaaaccagcagtaaattacagactgtttcaaaaagctga
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