Cuculus canorus (common cuckoo): 104064988
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Entry
104064988 CDS
T08597
Symbol
TNFAIP1
Name
(RefSeq) BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2
KO
K15074
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104064988 (TNFAIP1)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104064988 (TNFAIP1)
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Gene cluster
GFIT
Motif
Pfam:
BTB_2
BTB
BTB_3
SHPRH_helical-2nd
Motif
Other DBs
NCBI-GeneID:
104064988
NCBI-ProteinID:
XP_053941251
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All DBs
Position
20:complement(404875..421949)
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AA seq
314 aa
AA seq
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MSGDTCLTTTLCPAAGPKPKICSFKAGSLGNKYVRLNVGGSLYYTTVQVLTRHDTMLKAM
FSGRMEVLTDKEGWILIDRCGKHFGTILNYLRDDTIALPKHRQEIKELMAEAKYYLIQGL
VDMCQAALQDKKELYEPVCSIPIITSPKEEERLIESSMKPVVKLLYNRSNNKYSYTSNSD
DNLLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQ
TKVEFPEARIYEETLNVLLYETPRVPDNSLLEATSRSRSQASHSEDDEGFELRDRVRRIH
VKRYSTYDDRQLGH
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggacacctgtctcaccaccaccctttgtccagcggcggggcccaagcccaaa
atttgcagcttcaaagcgggcagccttggtaacaagtacgtgcgactgaacgttgggggt
tctttgtattacaccacagtgcaagtgctgacccggcacgacacaatgcttaaggccatg
ttcagcggcagaatggaggtgctcacggacaaggaaggctggatccttatagaccgttgt
gggaagcactttggaacaattttaaactatctccgagatgatacaattgcacttccaaaa
cacagacaagagatcaaagagttgatggcagaagccaaatattatctcattcagggctta
gtggacatgtgccaggcagccctgcaggataagaaagagttgtacgaacccgtctgcagc
atccctattatcacctcaccaaaagaagaagagaggctgatcgaatcgtcaatgaaacct
gttgttaagctgctttataacagaagcaacaataaatactcctacaccagtaactcagat
gacaacttactgaagaacatagaactgtttgacaaactctctctccgattcaacggcaga
gttcttttcattaaagatgttattggggatgaaatctgctgctggtctttctatggacag
ggtcggaagcttgctgaagtctgttgtacctctatcgtgtacgctacagagaagaagcaa
accaaggttgaattccctgaggcacggatttatgaggaaacactaaatgtcttactctat
gaaacgccacgagtccctgataactctctgctggaagcaacaagcaggagccgaagccag
gcgtctcacagtgaggacgatgagggctttgaacttcgtgaccgagtgcgccgcatccat
gtgaagagatacagcacctacgacgaccgtcagcttggccactag
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