Cuculus canorus (common cuckoo): 104065007
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Entry
104065007 CDS
T08597
Symbol
NF1
Name
(RefSeq) neurofibromin isoform X1
KO
K08052
neurofibromin 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104065007 (NF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_NF1
RasGAP
CRAL_TRIO_2
CRAL_TRIO
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
104065007
NCBI-ProteinID:
XP_053941405
LinkDB
All DBs
Position
20:724010..818582
Genome browser
AA seq
2849 aa
AA seq
DB search
MAAHKPVEWVQAVVNRFDEQLPIKASQQNTHTKVSTEHNKECLINISKYKFSLVISGLTN
ILKNVNNMRIFGETAEKNLYLSQLIILDTLEKCLAGQPKDTMRLDETMLVKQLLPEICHF
IHTYREGNQHAAELRNSASGVLFSLSCNNFNAVFSRISTRLQELTVCSEDNADVHDIELL
QYISVDCSKLKRLLQETVFKFKALKKVAQLAVINSLEKAFWNWVENYPDEFTKLYQTPQT
DMADCAEKLFDLVDGFAESTKRKAAVWPLQIILLVLCPEIIQDIAKDVVEETKMNKKLFL
DNLRKALAGHSGSRQLTESAAIACVKLCKASTYINWEDNSVIFLLVQSMVVDLKNLLFNP
SKPFSRGNQNADVDLMIDCLVSCFRINPHNNQHFKICLAQNSPSTFHYVLVNSLHRIITN
SALDWWPRIDAVYCHSMELRSMFSETLHKAIQGCGAHPAIRMTPSLTFKEKMTSLKFKEK
PTDLETRSYKFLLLSLVKLIHADPKLLLCNPRKQGPETQGSTAELITGLVQLVPQSSMPD
IAQEAMEALLVLHQLDSIDLWNPDAPIETFWEISSQMLFYICKKLTSHQMLSSTEILKWL
REILICRNKFLLKTKQSDRSSCHVLFLYDVSGGGTSQMSLDHEEMMRCAPGATLRKGKGN
SSMESTAGCSGTPICRQAQTKLEVALYMFLWSPDIEAVLVAMSCFRHLCEEADIRCGVDE
VSVHNFLPNYNTFMEFASVSNMMSTGRAALQKRVMALLRRIEHPTAGNTEAWEDTHAKWE
QATKLILNYPKTKMEDGQVTESLHKTIVKRRMSHVSGGGSIDLSDTDSLQEWINMTGFLC
ALGGVCLQHRSNAGLATYSPPMGPVNERKGSMISMVSTEGNVETPVSKFIDRLLTLMVCN
HEKVGLQIRTNIKDLVGLELSPALYPMLFNKLKNTISKFFDSQGQVLLTETNTQFVEQTI
AIMKNLLDNHTEGSSEHLGQASIETMMLNLVRYVRVLGNLVHAIQIKTKLCQLVEVMMER
RDDLSFCQEMKFRNKMVEYLTDWVMGTSNQATDEDVKCLTRDLDQASMEAVVSLLAGLPL
QPEEGDGVELMEAKSQLFLKYFTLFMNLLNDCSEVEDESTQTGGRKRGMSRRLASLRHCT
VLAMSNLLNANVDSGLMHSIGLGYHKDLQTRATFMEVLTKILQQGTEFDTLAETVLADRF
ERLVELVTMMGDQGELPIAMALANVVPCSQWDELARVLVTLFDSRHLLYQLLWNMFSKEV
ELADSMQTLFRGNSLASKIMTFCFKVYGATYLQKLLEPLLRTVITSSEWQHVSFEVDPTR
LEPTEGLEENQRNLLQMTEKFFHAIINSSLEFPPQLRSVCHCLYQATCHSLLNKATVKEK
KENKKSVVSQRFPQNSIGAVGSAMFLRFINPAIVSPYEAGILDKKPPPRIERGLKLMSKI
LQSIANHVLFTKEEHMRPFNDFVKSNFDAARRFFLDIASDCPASDTVNHSLSFISDGNVL
ALHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHWSSLNLT
SSKFEEFMTRHQVHEKEEFKALKTLNIFYQAGTSKAGNPVFYYIARRFKTGQINGDLLIY
HVLLTLKPYYAKPYEIVVDLTHAGPSNRFKTDFLSKWFVVFPGFAYENVSAVFIYNCNSW
VREYTKYHERLLTGLKGSKRLIFIDSPGKLAEHIEHDQQKLPAATLALEEDLKVFHNALK
LAHKDTKVSIKVGSTAVQVTSAERTRVLGQTVFLNDIYYASEIEEICLVDENQFTLTIAN
QGTPLTFMHQECEAIVRSIIHIRTRWELSQPDSIPQHTKIRPKDVPGTLLNIALLNLGSS
DPSLRSAAYNLLCALTCTFNLKIEGQLLETSGLCIPANNTLFIVSISKTLAANEPHLTLE
FLEECISGFSKSSIELKHLCLEYMTPWLSNLVRFCKHNDDAKRQRVTAILDKLITMTINE
KQMYPSIQAKIWGSLGQITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKL
VSSKVIGRMCKIIDKTCLSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFH
VVTLLVATGPLSLRASTHGLVINIIHSLCTCSQLHFSEETKQVLRLSLTEFSLPKFYLLF
GISKVKSAAVIAFRSSYRDRSFSPGSYERETFALTSLETVTEALLEIMEACMRDIPTCKW
LDQWTELAQKFAFQYNPSLQPRALVVFGCISKRVSHGQIKQIIRILSKGLESCLKGPDNY
NSQVLIEATVIALTKLQPLLNKDSPMHKALFWVAMAVLQLDEVNLYSAGTALLEQNLHTL
DSLRVFNDKSPEEVFMEIRRPLEWHCKQMDHFVGLNFNSNFNFALVGHLLKGYRHPSPTT
VARTVRILHTLLALVNKHRNCDKFEVNTQSVAYLAALLTVSEEVRSRCSLKHRKSLLLTD
VSMENVPMDTYPVHHSDTSYRTLKENQPWSSPKGSDRLAASYPTVGQISPRTRKSMSLDM
GQPSQANTKKLLGTRKSFDHLISDTKAPKRQDMESGITTPPKMRRVAENDYEMETQRISP
QQHPHLRKVSVSESNVLLDEEVLTDPKIQALLLTVLATLVKYTTDEFDQRILYEYLAEAS
VVFPKVFPVVHNLLDSKINTLLSLCQDPNLLNPIHGIVQSVVYHEESPPQYQTSYLQSFG
FNGLWRFAGPFSKQTQIPDYAELIVKFLDALIDTYLPGIDEETSEESLLTPTSPYPPAVQ
SQLSITANLNLSNSMTSLATSQHSPASLPCSKSAVFMQLPHQGIDKENVELSPTAGHSNS
GRMRHGSASQVQKQRSAGSFKRHSIKKIV
NT seq
8550 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacaagccggtggaatgggtgcaggccgtggtgaatcgcttcgatgagcag
cttccaataaaggccagccagcagaatacccacaccaaagtcagtacggagcacaacaag
gaatgtctcataaacatttcgaagtacaagttttccctggtcatcagtggtctcactaat
attttaaaaaatgttaataacatgagaatatttggagaaactgctgaaaagaatttatat
ctatctcagctgattatcttggatacactggaaaaatgtctggcagggcaaccaaaggat
accatgcgactagacgagactatgctggtaaaacagttgctgccagaaatttgccacttc
atccacacttaccgtgaagggaaccagcacgcagctgaactacgcaattctgcctctgga
gttcttttttctctgagctgcaataactttaatgctgtgttcagccgcatttccaccaga
ttacaggaactgactgtttgttcagaagataatgctgatgttcacgatattgaactttta
cagtacatcagtgtggattgttcaaaactaaaacgactcttgcaagagactgtattcaag
tttaaagctcttaagaaagtagctcagttagcggttatcaacagtcttgaaaaggcattt
tggaactgggtggaaaactatcctgatgaattcacaaagctgtatcaaacaccgcagacg
gacatggctgattgtgcagagaagttgtttgatttagtggatggctttgctgaaagcaca
aaacgtaaagcagccgtttggcccctgcaaatcatactcctcgtcctgtgtccagagata
attcaagatatagcaaaggatgtggtagaggaaacgaaaatgaacaagaaactgttcctg
gacaatctcaggaaagctcttgcaggccacagtgggagcagacagctgacggaaagtgct
gctattgcttgtgttaaactctgcaaagcatctacctacatcaactgggaagataattcc
gtcattttcctactagtgcagtccatggtagtagatcttaagaatttgctgtttaatcca
agcaaacctttctcaagaggcaatcagaatgcagatgtagaccttatgattgactgctta
gtttcctgcttccgcataaaccctcataataaccaacactttaagatctgcttggcacag
aattccccatcaacatttcattatgtgctggtaaattcactccaccgaataatcacaaat
tctgcgttggactggtggcccaggatcgatgctgtgtactgccattccatggagcttcgc
agcatgttcagtgagacgctgcataaagctattcagggctgtggggcacatccagcaatt
cgcatgactccgagtcttacatttaaggagaaaatgacaagccttaaatttaaagaaaaa
ccaactgatttggaaaccagaagctacaagttcttgctgttatccttggtaaaactgatt
catgctgatccaaagcttttgctgtgtaatccaaggaagcaaggacctgagacacaagga
agcacggctgaattaattacgggccttgtgcaacttgttccgcaatccagcatgccagat
atagcacaagaagccatggaggccttgctagttcttcaccagttagacagcattgacttg
tggaatcctgatgcgcctatagaaacattctgggaaattagttcgcaaatgcttttttat
atctgcaagaaactaactagtcatcagatgctcagcagtacagaaatcctcaagtggctg
cgggagattctcatctgtaggaataaatttcttctaaaaaccaaacaatcagataggagt
tcctgccacgttctcttcctttatgatgtctctggaggtggaactagtcaaatgtctctt
gaccatgaagagatgatgcgctgtgctccaggagctaccctcaggaaagggaaagggaat
tcttccatggaaagtacagcaggatgcagtggaacacccatttgtcgccaagcccaaaca
aaattggaagttgccttatacatgtttttgtggagcccagatatcgaggcggtccttgtt
gcaatgtcctgtttccgtcacctctgtgaggaagcagatatcagatgtggagtagatgaa
gtctcagtgcataattttttgccaaactataatactttcatggagtttgcgtctgttagc
aatatgatgtcaacagggagagcagctcttcagaaaagagtgatggcattgttaagacgc
attgaacatccaacagcaggaaacacagaggcctgggaggatactcatgcaaaatgggaa
caagctacaaaactaatccttaactatccaaagaccaaaatggaagatggccaggttact
gaaagtctccataagacgattgttaagaggcgaatgtcgcatgttagtggaggtggctcc
atagacttgtctgacacagattctcttcaggagtggatcaacatgacgggcttcttatgt
gcccttggaggagtgtgcctccagcatcgcagcaatgcaggattagcgacctacagccca
cccatgggcccagtcaacgagcggaagggctccatgatatctatggtgtccactgagggg
aatgtggagactcctgttagcaaattcatcgatcgattattgactctgatggtctgtaac
catgagaaagtgggactgcagatacggactaatattaaagacttggtgggtttggagttg
agtccagcactttatccaatgctgtttaacaaattgaagaataccatcagcaagtttttt
gattcccaaggacaggttttgttaactgagaccaacacacagtttgtagagcaaaccatt
gctataatgaagaacttgcttgacaatcacacagaagggagctcagaacaccttggacaa
gctagtattgagacaatgatgctaaatctggttaggtatgtgcgagtgcttggaaatttg
gtacatgcaattcaaataaaaactaagctatgtcagttagtagaagtaatgatggagagg
agagatgacctttcattttgccaagaaatgaaatttaggaacaaaatggtggaatatttg
acagactgggttatgggaacatctaatcaagcaacggatgaggatgtgaaatgccttaca
agagatttagaccaagcgagtatggaagcagtggtatcccttcttgctgggcttccacta
cagcctgaagaaggagatggtgttgagttgatggaagcaaaatctcagttatttcttaag
tatttcacactgtttatgaaccttctaaatgactgtagtgaagttgaagatgaaagcaca
caaacaggtggcaggaaacgcggaatgtcacgaaggcttgcttcactacggcactgcact
gttcttgccatgtcaaatttactcaatgcaaatgtggacagtggtcttatgcactcaata
ggcttgggctatcataaagacctccaaacaagagctacgtttatggaagtcctcaccaaa
attctgcagcagggaacagaatttgatacgttagcagaaacagtgctagcagatcggttt
gagagattggtggagttggttacaatgatgggtgatcagggggagcttcctattgctatg
gctttagccaatgtggtgccttgttctcagtgggatgagttagctcgtgtcctggtcaca
ctctttgattcccgacacttgctctaccagctactttggaatatgttttcaaaggaagtt
gaactagcagattccatgcagacgctcttccgaggaaacagcttagccagtaaaataatg
actttctgttttaaggtatatggtgctacatatttgcagaagcttttggagcctttatta
aggactgtgatcacatcctctgaatggcagcatgttagctttgaggtggatccaacaagg
ctggagcctacagaaggccttgaagagaaccagcggaatctcttgcaaatgactgaaaaa
ttttttcatgcaatcattaattcttccttggagttcccgccacagcttcgcagtgtgtgc
cattgtttataccaggcaacttgccactctctactgaataaagctaccgtaaaagaaaaa
aaggaaaacaaaaaatcagttgttagtcagcgatttccccagaacagcattggagcagtt
ggaagcgccatgttccttcggttcatcaatcctgcgatcgtctccccttatgaggcaggg
attttagataaaaagcctccaccaagaattgaaaggggattgaaactgatgtccaagata
cttcaaagcattgccaaccacgtcctctttacaaaagaagaacatatgcggccttttaat
gattttgtaaaaagcaattttgatgcagcacgaaggtttttccttgacattgcatctgat
tgcccagctagcgacaccgtcaatcacagcctgtccttcattagtgacggcaacgtcctt
gctttgcaccggttgctgtggaacaatcaggagaaaattggccagtacctttccagcaac
agggaccacaaggctgttggaagacgaccttttgacaagatggctactctgcttgcctat
ctgggtcctcctgagcacaaacccgtggcagatacccactggtccagtttaaacctcact
agttccaaatttgaagagtttatgacaaggcatcaggtacatgaaaaagaggagttcaaa
gcactgaaaacattaaatattttctaccaagctgggacatcaaaagctggtaatcctgtt
ttctactacattgcccggagattcaagactggtcagatcaacggagatttattgatatac
catgtactgctaactctgaagccatactatgcaaagccatatgaaattgtagtggacctc
acacatgctggccccagtaaccgctttaaaacagactttctttccaaatggtttgtagtt
tttccaggctttgcttatgaaaacgtctcagcagtttttatttataactgtaactcttgg
gtcagagaatacactaaataccatgaaaggctcttgacaggtttgaaagggagcaaaagg
ctcattttcatagactctccagggaaactggcagagcacattgaacacgaccagcagaaa
ctcccagcagctaccttggctttggaggaggacttgaaagtatttcacaatgctctcaaa
ctggctcataaagacaccaaagtttctattaaagttgggtcaacagctgtgcaggtgaca
tcagcagaacgaacaagagttctgggacaaacagtgtttctaaatgatatatactatgcc
tctgaaattgaggaaatatgtcttgttgatgagaaccagtttaccttaaccattgccaac
caaggcacaccactcaccttcatgcatcaggagtgtgaagccatcgttaggtccatcatt
catatacggacacggtgggagctgtcacaaccggactccatcccacagcacactaagatt
cgccctaaggatgtccctggaacactactgaacatagcgctgcttaacctgggaagctca
gaccccagcctgcggtctgctgcctataacctcctatgtgccttaacctgtacctttaat
ttaaagattgagggccagttactggaaacttcaggtctgtgtattcctgccaacaacacg
ctatttattgtttctattagtaagactcttgcagctaacgaaccacaccttaccttagag
ttcttggaagagtgtatctctggatttagcaaatctagtatcgagctgaaacatctctgc
ctggagtacatgactccctggctgtccaatctggtccgattctgtaaacacaatgatgat
gctaagcgccagcgagtcactgctattcttgataagctgataacaatgacaataaatgaa
aaacagatgtatccttccattcaagctaagatctggggaagtcttggacagatcacagat
ctcctggatgtggtgctggacagcttcatcaaaacaagtgccacggggggcttaggatcc
ataaaagctgaggttatggcagacacagctgtagcacttgcttctggaaatgtaaaattg
gtttcaagcaaagtgattggaaggatgtgtaaaataatcgataagacttgtctgtctcca
acacctacattggaacagcacctgatgtgggacgatattgccatcctagcacgttacatg
ctgatgctctcctttaacaactctctggacgtagcagcgcatctgccctacctctttcat
gttgttactttattggtggccacgggtcccctttctcttagagcttccactcatggtctc
gtcatcaacatcattcattctctttgcacttgttcacagcttcactttagtgaggagacc
aaacaagttttaaggctgagcttgactgagttctctctgcccaagttttacttgcttttt
ggaatcagcaaagtgaaatcagccgctgtcatagcattccgatccagctatcgagacagg
tcattttctcctggttcctatgaaagagagacttttgcactgacttcgttggaaacggtt
actgaagccttgttggagatcatggaggcctgcatgagggatattccaacatgcaagtgg
ctggaccagtggactgaactagctcaaaagtttgctttccaatataatccgtccttgcag
ccaagagcactcgttgtctttggctgtataagtaaacgtgtgtctcatggacagataaaa
caaatcatccgaattcttagcaagggacttgaaagctgtttaaaaggccctgataattac
aatagccaagttctaatagaagctaccgttatagcactcaccaagctacagccgcttctt
aataaggactccccaatgcacaaggccctcttctgggtagctatggcagtcctgcagttg
gacgaagtgaacttgtactctgcaggcacggccctgctggaacagaacctgcataccttg
gacagccttcgggtgttcaatgataagagcccagaagaggtgtttatggagatcaggaga
ccgctcgaatggcactgtaagcagatggatcactttgttgggctaaatttcaactccaac
tttaacttcgcactagtgggacacctcctgaaaggatacaggcatccttcccctaccact
gtagcaagaacagtaaggattttacatacgctactagctctggttaacaaacataggaac
tgtgacaagtttgaggtgaacacccagagcgtggcttacctagcagctttgctcacagta
tctgaggaagttcgaagtcgctgcagcctaaagcataggaagtctctcttattgacagat
gtttcaatggaaaatgttcctatggatacatatcccgtacatcacagtgacactagctat
aggacactaaaggaaaatcagccatggtcatcaccaaaggggtcagacagactggctgcc
agttacccgacagtgggacagataagccctcgaacacgaaaatccatgagtttggatatg
gggcagccttcacaagcgaacactaaaaagcttctaggtacaaggaaaagttttgaccat
ttgatatcggacacaaaggctcctaaaaggcaagacatggaatctggaatcacaacgcct
cccaaaatgaggagagtagccgaaaatgattatgaaatggaaacccagagaatatcaccg
caacaacacccccatcttcgaaaagtttctgtttcggagtcaaatgtcctcctagatgaa
gaagttctgactgacccaaaaattcaagcactgctgcttacagttcttgcaacattagtg
aaatacactactgacgagtttgaccagcggattctgtatgagtatttagcagaagccagt
gttgtcttcccaaaggtctttcctgtagtgcataatttattggattccaagatcaatacc
cttttatcgctgtgccaggatccaaatttgttgaatccaattcatgggattgttcagagt
gttgtctaccatgaagagtctccgccccagtaccaaacttcttatctacagagttttggg
tttaatgggttatggaggtttgctggcccattttctaagcaaacacagatcccagactat
gctgagctcattgtgaagtttcttgatgccttgatcgacacatatttgcctggaattgat
gaggaaaccagtgaagaatctctcttgacacccacatctccgtatcctcccgcagtgcag
agccagcttagcattactgctaatcttaacctttccaattccatgacctcacttgcgact
tcccagcactccccagcttctctgccttgctctaaatctgcagttttcatgcagcttcct
catcaagggatcgacaaggagaacgtggagctttcgcccactgccggacactccaacagc
gggaggatgcgccacggctctgcaagccaagtgcaaaagcagcgaagtgctggcagtttc
aaacgccacagcatcaaaaagattgtgtga
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