Cuculus canorus (common cuckoo): 104065020
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Entry
104065020 CDS
T08597
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104065020 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104065020 (HERC3)
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104065020 (HERC3)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
HECT type E3
104065020 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
104065020
NCBI-ProteinID:
XP_053920287
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All DBs
Position
4:48386293..48439974
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AA seq
1050 aa
AA seq
DB search
MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRSVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHNCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
MEDSVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHVVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLD
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAILRLDTNP
SKVLDNWWCQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHIEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDVEETFCLNFTICRESYGITEQKNLIEDGDKILVQKDNRKEFVEAYINYIFNL
SIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIVIQSTASGEQYLPVAHTCYN
LLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggatactcatcttttggacagcctgggataggtagcaacctccaggtc
atcattcctgaaccacaggtatatggattcattcatgacagaagtgtcaaggaggtggca
tgtggaggaaaccactccgtgttcctgttggaagatggggaagtgtatacttgtggtttg
aacaccaaaggccaactggggcacaactgtgaaggaagcaagccagagcaaattggagcc
ctggctgggcaacacatcgtgcacgtggcctgtggagagtctcacagcgtggcgctcagc
gaccagggccagctcttctcctggggtgctggcagcgatggacaattgggcctcaccact
atggaagactcagtgacagtaccaaggttaataaagaaattgaaccaacagactatactg
caggtttcctgtggaaattggcattgcctggctttggcagcagatggccagttcttcaca
tgggggcagaacagctatggtcagctgggcctgggtaaagaatgtccctcccaagccagt
ccacaacgtgtgaagtctctagatggcatccctttggctcaggttgctgcaggtggagcc
cacagttttgccctctctctctcaggagctgtgtttggctgggggaagaacagctcaggg
cagctgggactaagtgatgaacgagaccgagaatctccgtgtcatgtgaaactgttgcga
tctcagaaggttgtttacatcagctgtggagaggaacacacagcagttctgacaaagagt
ggaggggtgttcacgttcggtgcaggttcctgtgggcaactgggacatgactccatgaat
gatgaagtgaacccccgaagagttcttgagctaatgggcagtgaagtatcccaaattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacggggcacacttgcaatgttaagtgtccctctcct
gtcaagggtcactgggcagctcacaatgggcaactctcagggaaacctgatgcctgtaaa
tatcacgttgttaaacatatattctctggaggagaccaaacatttgtgctttgctccaaa
tatgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataacgttgttcagatactgtcctcggctgcctgctggaatggaagcttc
ttggagaagaaaattgatgaacattttaaaaccagtccgaagatcccagggattgatctg
aactccaccagagtgctgtttgagaagctgatgaactctcagcactccattcttctagac
cagatactgaagagctttgaaagttttttgattcctcagctgtccagctcaccaccagat
gtcgaggcaatgaggatttatctgattctccctgaattccctcctttccaagattcaaag
tattatatcacgttaacgcttcctctagcaatggctattctgcgcctcgataccaacccc
agcaaagttcttgataactggtggtgtcaagtgtgcccaagatatttcctcaggctagtg
gacctctataaaggcgcagtggtttacctcctcagtggaagaaagacactgttgatccca
gtcctgttcagtagctacattacagctgctctcagacttctggagaaactccacaaggta
aatcagaaggttaaacacatagaatatgataagttttatatccctgaaatttccagcttg
gtggacattcaggaggattatctcatgtggttcttacatcaggctggaatgaaagtaaga
ccatccatcatgcaggatgctgtgacactctgttcttatcctttcatcttcgatgctcag
gctaagaccaagatgttacagacagatgcagaactacagatgcaggttgcaataaatggt
gcaaatttgcagaatgtcttcatgcttcttactctggagcctttgctagccagaagccct
tttctggtacttcatgttcgcaggagtaatttagtcggtgatgctttaagggagttgagc
atccattcggacattgatttgaaaaagcctcttaaagtcatctttgatggcgaggaagct
gttgatgctggaggagtaacaaaggaatttttcctcttgttgttaaaagaacttctcaac
cccatctatggcatgttcacttactacccagagtcaaacctgctgtggttttcagacacg
tgttttgtagaacacaattggtttcacttgattggcatcatatgcggtcttgcaatatac
aacttcacagttgtagaccttcactttcccttggctctgtacaagaaactcttgaacgtg
aagccctgcctagaggatttgaaggagctatcccctacagaaggaaggagtcttcagcaa
cttctggattacccaggggaagatgtagaagagacattctgcttgaattttacaatctgc
agagaaagctatggtataacggagcagaagaacctgattgaagatggagataagattctg
gtgcagaaggacaataggaaagaatttgttgaagcctacataaattacatcttcaacctc
tccatccatgagtggtacactgccttttccactggcttcctgaaagtgtgtggtgggaaa
gtcctggaactcttccagcccacagagctcagggccatgatagttggaaacagtaactac
aactgggaagaattggaggagagtgctgtctataagggagactacactgcaacacaccca
actgtgagaatgttttgggaaacctttcatgcatttcccttggaaaagaagaagaaattt
ctcttatttctgacgggcagcgatcgcattcccatctatggcatgtccagcctgcgcatc
gtcatccagtccactgccagtggggagcagtacctgcctgtggcgcatacctgctacaat
ctcctggacctgcccaagtacagcagcaaggagatcctcagcgcccgcctcgtgcaagct
atcgatcactacgagggctttagcttagcttga
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