Cuculus canorus (common cuckoo): 104065028
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Entry
104065028 CDS
T08597
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04514
Cell adhesion molecule (CAM) interaction
cuca04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104065028 (LRRC4B)
04517 IgSF CAM signaling
104065028 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104065028 (LRRC4B)
Cell adhesion molecules [BR:
cuca04515
]
Immunoglobulin superfamily
NGL family
104065028 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
DUF7617
Fungus-induced
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
104065028
NCBI-ProteinID:
XP_053908290
LinkDB
All DBs
Position
33
Genome browser
AA seq
662 aa
AA seq
DB search
MASSTPLRMRPPSPPPPPPFLLLLLLLLLLLLLVSPSFPASAPTSCPAACSCSNQASRVI
CTRRDLLEVPGSISVNTRYLNLQENHIQIIRTDTFKHLRHLEILQLSRNLVRKVEVGAFN
GLPNLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGE
LKRLEYISEAAFEGLVNLRYLNLGMCNLKEIPNLTALVRLEELELSGNRLGRVRPGSFQG
LGSLRKLWLMHARVAAVERNAFDDLKALEELNLAHNELASLPHDLFAPLHRLERVHLHHN
PWRCDCDVLWLSWWLRETVPSNTSCCARCHAPPPLRGRYLGELEPGHFTCYAPVIVEPPA
DLNVTEGMAAELKCRTGTAMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDT
GQYTCMVTNAAGNTTASATLNVSAADAAAAAAAAATGYTYFTTVTVETTDAGGEEPSPQT
SSAPTAGWDTSGVSTASPSTRATGKPFTVAITAVASSGGAGGGLQDLDDVLKTTKIIIGC
FVAITFMAAVMLVAFYKLRKQHQRHKHHRGGGGGAARAVEIVNVEDELSAATAAGGGGCG
GDNRLALPALERDHLERYAALAAHYGNTATAAALGKTPLLNSVHEPLLFKSPSKENVQET
QI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatccacgccccttaggatgcggccgccgtcgcctcctcctcctccgccattc
cttctccttctccttctcctccttctcctcctcctcttggtatccccatctttcccggct
tccgctcccacctcctgcccggccgcctgttcctgcagcaaccaagccagccgcgtcatc
tgcacccgccgcgacctcctggaagtccccggaagcatttccgtcaacacccgatacctc
aacctccaagagaaccacatccaaatcatccgtacggataccttcaaacaccttcgccac
ttggaaatccttcaactcagccggaatttagtccgcaaagtcgaagtcggagcgtttaac
ggtctccccaacctcaacacgttggagctcttcgacaaccgtttgaccaccgttcccacc
caagcgttcgagtacctctccaaactccgcgagctttggttacggaataaccccatcgag
agtatcccttcgtacgccttcaaccgcgtcccttctttacgccgcctcgacctcggcgaa
ctcaaacgcttggaatacatctccgaagccgctttcgaagggttggtcaacctccgctac
ttaaatttagggatgtgtaacctcaaggagatcccaaatttaaccgctttggtccgattg
gaagaattggaactttccggtaaccgtttaggtcgcgtccgaccgggatctttccaaggc
ctcgggagtttgaggaagctatggttgatgcacgcacgcgtggcggcggtggaacgcaac
gcattcgatgacctcaaagctttggaagagctcaatttggcccataacgaattggcgtcg
ttaccgcacgaccttttcgcaccgttgcaccgtttggaacgcgttcacctccaccataac
ccttggcggtgcgattgcgacgtcctttggttgagttggtggttgagggagaccgttccc
agtaacaccagttgttgcgcccggtgtcacgcgccgccgccgttacgcgggcgctattta
ggcgagttggaaccggggcacttcacctgttacgctccggttatcgtcgaaccgcccgcc
gaccttaacgtcaccgaaggaatggcggccgagctcaaatgccgtaccggaaccgctatg
acgtcggtgaattggttgacgcccaacgggacgttaatgactcacggttcgtaccgcgtc
cgtatttccgtcttacacgacggaacgctcaatttcaccaacgtcaccgtgcaagacacg
gggcaatatacctgtatggtgaccaacgccgccggtaacaccacggcgtcggcaacgctg
aacgtttcggccgccgacgccgccgctgccgccgccgccgccgctacgggatacacctat
ttcaccaccgtcaccgtggaaaccaccgacgccggcggcgaagaaccatccccgcaaaca
tcatcggcgcccaccgccgggtgggatacatccggcgtttcgacggcgtctccgtccacg
cgagcgacggggaaaccctttacggtggccataacggcggtggcgtcatccggcggcgcc
ggcggtggtctccaagatttggatgacgtcttgaagaccaccaaaatcatcatcgggtgc
ttcgtggccatcaccttcatggccgccgttatgttggtggcgttctataagttacggaag
caacaccaacgccataagcatcaccgcggcggcggcggcggtgccgcgcgcgccgtggag
atcgtgaacgtggaggatgagttgtccgccgccaccgccgccggtggtggtggttgtggt
ggtgataaccgtttggcgttaccggcgttggagagggatcacctggagcgttacgcggcg
ttggcggcgcattacggtaacaccgcgacggcggcggcgttggggaaaacgccgctgctc
aactccgtgcacgaaccgctgctcttcaagagcccttccaaggagaacgttcaggagacg
cagatctga
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