Cuculus canorus (common cuckoo): 104065046
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Entry
104065046 CDS
T08597
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104065046 (RBBP6)
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104065046 (RBBP6)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
U-box type E3
104065046 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104065046
NCBI-ProteinID:
XP_053936190
LinkDB
All DBs
Position
15:complement(7733853..7765178)
Genome browser
AA seq
1864 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
TALIPKNSSVIVRRIPIGGVKATSKTYVISRTEPVSGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMTQSGHEYDPVNYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EDPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESEEHTCPTCH
QTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQVQQQQQQQQQPPPPPPPPPPPPLMR
QTITRNLQPLLRPAISRQQDPLMIPLASLASRSALSSLGPGQSPMAAGLPVNPSSVVVSD
LPPAMSLSLREKPDGPFRDPDTVLPPALMSAEITKSASLSISSLLEEKGYQVPVLRQPAL
PSLLGPQGQSIPTTGHPMRAGAIRSLGGRPGWELSNRGRLHSERSQRSQAPSLPASAPVF
VPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYAVPPPGYPPAPANISSAWV
PTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQ
KERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRR
GKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQGEGEREYFN
RYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGARPPVNRENF
SPDRFVPPGTRRETSPYARGRREDYPGGQSHRNRSVAGSYPEKPSGRESHGIKDPTKSKE
KEVENPLGDGKGNKHKKHRKRRKGDENEGFPSTELLEGARKPREPVTTEDAKTDSLFMVP
SRDDATPVRDEPMEADSIAFKPVSEKEKKEKEKPKAKVDKTKRKTEAAVAPKKDNVVKPA
KASQEKVDADREKSPRTEPPVKKVKEELPKTDSVKTSSSQKEEKALGTPRKAHPKVTKDH
GETRPAKEEKAKKDHPKETKSEKTSNKEDKSKKPADKSKPSDAKPEKRKRKADEKADKEH
EGTSIKASKPETAESKTSPKGKTEPDGEKGERTPEKDKSALNNPAKKIKLNRETGKKIVS
GENVPAAKEPSEKPEPSSSKVKQDKAKGKARRKVTAADGSSSTLVDYTSTSSTGGSPVRK
MEEKPEKTDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEEDIKSTQV
PTSIGKPASVVKNVSAKPPNPVKHIEKETEPLEKTQKTTKEASCESSQHDAKSSKSSMLS
EKGKTKDRDHSLSDKDTSEKRKSSVQVEKDHSERAAEQGNGKSTSQSSKDSRSSEKHDVG
RGSTVKDFTPNRDKKSSDHDGNRDHSSSKRRDDKSELARRKDSPSRNRESTSVQKSKPRE
ERTDPSKKGAGDAKRSSYSPSRERKQSDHKAAHDSKRTLEEHKPLDKNTGKDKDKEKEKD
KEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE
KEKEKEKEKEKEKEKEKEKEKEKLIPEVKSNKEKEPAGNKPPLRQESPDVKNEKENVTGQ
SDKSIVKPKPQVSSSSRLSSDLTRETDEAAFVPDYNESDSESNVSAKEEEAVGKTPKEPK
EKAVEKAKEETAVPAAAADQPEASRSQSQSSPSVSHSRSQSPSESQTRSHSSSASSGESQ
DSKKKKKKKEKKKHKKHKKHKKHKKHIGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVK
SATT
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcgtcgaagctcaactatgacacggtcacgttcgac
gggctccacatctcgctgtgcgacctgaagcgccagatcatgggccgcgagaagctgaag
gcggctgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacacggatgat
actgctctgattccgaagaattcttcagtaattgttagaagaatccctattggaggagtt
aaagctaccagcaaaacttatgttataagtcgaactgagccagtgagtggaacatcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttactaagactgccaatctg
gctgaagccaatgcttccgaggaggataaaataaaagctatgatgacacagtctggccat
gaatatgatccagtcaattacatgaagaaacccttgggtccacctcccccatcgtacacg
tgctttcgttgcggcaaacctggccactacataaagaactgcccgacaaatggggacaaa
aattttgagtccgttcccagaattaaaaagagcacgggaattccaaggagtttcatgatg
gaggtgaaagatcccaatacaaagggtgcgatgctgaccaacacaggaaaatacgcaata
ccaactattgatgcggaagcttatgctataggaaagaaggaaaagcctccttttttacca
gaggatccatcctcctcctcggaagaagatgatcctattccagatgagttgttgtgtctc
atttgtaaagatataatgaccgatgccgttgttattccgtgctgtggaaacagttactgt
gatgaatgtattagaacagcattactggaatctgaggaacatacgtgccccacgtgtcat
cagacagatgtttctcccgatgcattaattgccaacaaattcctgcgccaggctgtgaac
aacttcaaaaatgaaaccggctacacaaaaagactccgtaagcaggttcagcagcaacag
caacagcagcagcagccaccaccaccaccgccgccaccacctccaccacccctcatgaga
caaacaataacacgcaacctgcagcctctgctccggccagccatttccaggcagcaggat
ccactcatgatacccttagcttctctggcttctcgttctgctttgtcatcgctgggccct
ggtcaatcacctatggcagctgggctgccagtaaatccttcttctgttgttgtctctgat
ctccctccagcgatgtccctgtctctccgtgaaaagccagacggaccttttcgtgatccc
gatactgttttgcctcctgctttgatgtctgctgagattaccaagtctgcctcgctgtct
atcagcagcttgttggaagagaagggctatcaggttcctgtcctaagacagccagcattg
ccgagtctcctgggccctcaaggacaatctatacccacgactggtcacccaatgagagcc
ggggcaattcgctcactgggaggcagaccaggctgggaactttcaaatcgaggacgcctg
catagtgaacgttcccaaaggagccaggccccatcactaccagcatcagcaccagtcttt
gtgcctgtgcctccacctcccttgtaccctccaccaccccacgcacttcctcttccaccg
ggggtgccaccaccacagtttcctcctcagtttccaccgggccagcctccatctgctggg
tacgctgtcccccctccaggataccccccagctcctgcaaacatctcatcagcttgggtc
ccaacagcagtaccagcggctcattcaaataccatcccaacgacacaggctcctccctta
tctagggaggagttttaccgagaacagcggagacttaaagaggaggaaaagaaaaagtcc
aaacttgatgagtttacaaatgattttgctaaggaattgatggaatataaaaagattcaa
aaggagcgtaggcgttcgttttccaggtcaaagtctccctatagtgcttcatcctactct
agaagttcctatacctactcaaagtcaagatcaggttcttcccgctctcgctcctactct
cgatcgtttagtcgttcccattctcgctcctactcacggtcaccgccgtacccaagaaga
ggcaaagggaagagtcgtaactatcgctctaggtcgaggtcgcatggttatcaccggtca
cggtccaggtcgcccccatacagacgataccattcacggtcaaggtctcccgtatttaga
ggccagtctcccactaagcggactgtacctcaaggcgaaggagagagggagtattttaac
agatatagagaagttccaccatacgacatgaaagcttactatggcagatctgttgacttt
agagacccttttgaaaaggaaaggtacagggagtgggaacggaactatagagaatggtat
gaaaagttttacaagggctatgctgttggtgcccgacctccggtaaatagagagaacttc
tctccagatagatttgttccccccgggaccagacgagagacttcgccatatgctcgggga
cgcagagaagattatcctggtgggcagagccacagaaatcgtagtgtagctggaagctat
cctgaaaaaccttctggaagagagagccatggcatcaaggaccctacaaaatcaaaagag
aaggaggtggaaaacccactgggagatggcaaaggaaataagcataaaaaacaccggaag
agaaggaaaggggatgagaatgaaggatttcccagcaccgagttgttagaaggtgcgaga
aaaccaagagagccagttacaactgaagatgctaaaacggactctctcttcatggttcca
agcagagatgatgccacccctgtgagagatgagcctatggaagccgattcgattgctttc
aaaccagtgtctgaaaaggagaaaaaagagaaagagaaaccaaaagcaaaagttgacaag
acaaagcggaaaacagaagcggctgttgctcccaagaaagacaatgtagtaaaaccagct
aaagcttcacaagagaaggtggacgctgatcgtgaaaagtctcctcgaacagaacctcct
gtgaaaaaagtgaaggaagagctgccaaagacagacagtgttaaaacatcctcctctcaa
aaggaggagaaggctcttggtaccccacggaaagctcacccaaaagtgacaaaagatcac
ggagaaaccagaccagccaaggaggaaaaggcaaagaaagaccatccaaaagaaaccaag
tcagagaagacctccaacaaagaggacaagtcaaaaaaacctgctgacaaaagcaaacct
tctgatgccaaacctgaaaaaagaaaaagaaaagcagatgaaaaggccgataaagaacat
gaaggcacttccataaaggcctctaaaccagaaactgctgaatcaaaaacatcgccaaag
gggaagactgagcctgatggtgaaaaaggagagagaactcccgaaaaggacaaatctgct
cttaacaaccctgcaaaaaagattaaactgaaccgagaaactggcaagaagatcgtgagt
ggagagaacgtgccagctgctaaagagccttctgagaaaccagagccgagcagcagcaaa
gtcaaacaagacaaagcaaagggaaaagcaagaagaaaagtgacagcagctgatggatcc
agttcaactctcgtcgactacaccagcaccagttctactggaggaagccctgttcgaaag
atggaagaaaagccagaaaaaacagataccaaacgaactgtcattaagaccatggaggaa
tataataacgatataacagccccagctgaagatgtgattattatgatccaggtccctcag
tcgaagtgggataaagacgactttgagtctgaagaggaagacattaaatccacccaggtg
cccacaagcataggaaaacctgctagcgttgtaaaaaatgtgagcgctaagccaccaaac
ccagtaaaacatattgaaaaagagacggagcctttggagaaaacacagaaaactacaaaa
gaggcgagttgtgaaagctcccagcatgatgcaaaaagttcaaaaagctcaatgctgagt
gaaaaaggaaaaaccaaagaccgggatcattctttgtcagacaaggacacttctgagaag
aggaagagcagtgttcaggtagaaaaagaccactcggaacgtgcagctgagcaaggaaat
ggaaaaagtacttctcagtcttccaaagacagcagatcttcagagaaacacgatgttggc
cgcggatccactgtaaaagacttcactccaaaccgcgacaagaagtcgtctgaccatgat
ggcaacagagatcattctagttccaagcgtcgagatgataagagtgaattagcaaggaga
aaagactccccttcacgaaacagagaatctacatcggtacagaagagtaagccaagagag
gaacgaacagatccgtccaaaaagggtgctggagatgccaaaaggagcagctacagtcct
tcacgtgagcggaagcagtctgatcacaaagctgctcacgattccaagcgtacattggag
gaacacaaacctctagataaaaatacaggaaaagataaggacaaagaaaaagagaaagat
aaagagaaagaaaaagaaaaggagaaagaaaaagaaaaagaaaaggagaaagaaaaggag
aaagagaaagaaaaggagaaagaaaaagaaaaggagaaagaaaaggaaaaagaaaaggag
aaggaaaaagagaaagaaaaggagaaagaaaaagaaaaggaaaaagaaaaagaaaaggaa
aaagaaaaggaaaaggaaaaagagaaagaaaaggagaaagaaaaagagaaggagaaggaa
aaagagaagcttatcccagaagtgaagagcaataaagagaaagagccagctggtaacaaa
ccacctttgagacaagagtcaccagatgtaaaaaatgagaaagagaatgtaactgggcaa
agcgataagagcattgtcaagcccaagccgcaggtaagcagctcctcacggctctcttct
gatctgactcgagagacagatgaggctgcgttcgtacctgactacaatgaaagtgacagc
gagagtaatgtatcagcaaaagaggaggaggctgtgggcaagactcctaaagaaccgaag
gagaaagctgtggagaaggcgaaagaggagactgcagtgcctgctgccgcagctgaccag
cccgaagcgagcaggagtcaaagccagagcagccccagcgtgagccacagccgcagtcag
agcccgtccgagagccagacccggagccacagcagcagtgccagctcaggagagagccag
gacagcaagaaaaagaaaaagaaaaaagagaaaaagaagcacaagaagcataagaaacac
aagaaacataagaaacacatcggaaatgaaacagaattggaaaagagccaaaaacacaaa
cacaagaagaaaaaatcgaagaagagcaaagataaggagaaagatgaccaaaaagtgaaa
tctgccactacatag
DBGET
integrated database retrieval system
