Cuculus canorus (common cuckoo): 104065157
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Entry
104065157 CDS
T08597
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104065157 (DENND4A)
Membrane trafficking [BR:
cuca04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104065157 (DENND4A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
104065157
NCBI-ProteinID:
XP_053933074
LinkDB
All DBs
Position
12:complement(14001835..14056739)
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AA seq
1888 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIAKPKEPVTDVTVINKSLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRNKPPLTDLGVLYDGKERVKQGCEIIQ
TTPYGRPANISGNASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAAAVEGK
SDACRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPS
PQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDP
PPDVSCVDLDTNTISQTGDKKAIAWKILPKKPCKNLMNTLNNLYQQLAELQQRPREDALM
ELAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFE
LQGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGET
RLIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLDLFERPEGLLTAPNN
KLSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYV
KVCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAG
IDPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKLPASTSHTAI
PGGLSDFGNNTSFKEETRQGKTCLQDIQEQKEDKRESDSSSLSEVESTKESGDCLPKLNY
QNSSNAKAASSIVRLNGTVDNTIAEDSAETSVGLLFTSSFEDVSEAEVIKSKSLRKRHKS
AVEPDLREIPWESRNRNLSGDGLVGLMINRINQDPNPGEIVEKLGADAKILSSALQKNIR
PKTLNIRTSSLGSKRESLEKESSDEDAAFDCSFTDKTESPVIFDLEDLDAEPETPTAVKS
SVEKSRRLQRKSSFPVKPVEKTDVETGFDPLSLLVAETEQQKEEEEEEDDRSVSTPSARR
DLAEEIVMYMNNMSSPLSSRAPSIELQKPNDDRNAHKKSPTVIQPCRRSSLPPNSPRPSG
LTKSKSYHAKSEEKPRDRLWSSPAYSPNSPAKEQPQDGSSALTLVSSPSFNLDTLLTPKF
DVLKSSMFSAGKGVAEKASKWYSKFTMYAASSKDQNSDRASVSSLGALDSESTSLTDEDV
CNDFESASPHENTASEIKRIGLSRTSLESSASHDGSSKQFDQCAGSLSKFPLPDKSELIS
SCSTSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFL
PFLSIEIRDLRRPGRYFLKSSPSTENMQLPSLFSSRSGKSCNTTATVGLATSLMSVQEDI
NSNSKSKQHDNICARSIQIPSGRRQNTSGSECTSHPVARSISTFGPLEEDEKENQKINHI
IPTGSLPATLQGPTDSLGLEWRLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADF
VDHHPIVFWNLVWYFRRLDLPSNLPGLILTSEHCNKNSKIPRNCMSEDSKYVLIQMLWDN
MKLHQDPRQPLYILWNAQSQNRTLLFETQKYPMVHLLQKDDDSFNQELLRSMVKSIKMND
VYGPMSQILERLNKWPHIKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYDRLTAS
QVKNTHNCDRPPSTGVMECRKIFGEPYL
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagggggcccgtgttgctgactactttgttgtcgcaggattaactgatatt
tcaaaaccactggaggaagaaatccacttcaatgatgcttgccataaaatcgctaaacca
aaagaacctgttacagatgtaacagtaattaataaatctctgggggaggaagttcctcag
ggatataaatgcatagatgttactccctcaggactgtctgcagatctcaataacggtagt
cttgtaggacctcaaatatacctttgttatcgccgaggaaggaataagcctccacttact
gatttgggggttttatatgatgggaaagaaagagtaaagcaaggctgtgaaataattcaa
actactccatatggtcggcctgccaatattagtggcaatgcctcatcacagagggtgtac
atcacttaccgaagagcatcagaaaacatgacacaaaacactctggctgttacggatata
tgtataattataccaagtaaaggagaaacccctccacatacgttctgcaaggttgacaag
aatcttaacaacagtatgtggggttcagcagtatatttatgttataaaaaatctgtggca
aaaaccaacaccatatcatataaagctggtttaatatgcagatatcctgaagaagattat
gaatcattcccattaccagaatctgtgcctcttttttgtctgcctatgggtgcaacaatt
gaatgttggccgtctaacagtaaataccctctcccagttttttctacctttgtattaact
ggagcttctgcagaaaaggtatatggtgctgctatccagttttatgaactctatcctgaa
gagaatctcacagagaaacaaaagtctcagctgggattagcagctgctgttgagggcaag
tcagatgcatgcagaacagttcaaacgaataaatgcatctgtctgctctctcactggcct
ttctttgatgctttcaagaagtttcttacctttctgtatcgctactccatttctggtcca
cacgttctgcccattgaaaagcacatttcccatttcatgcataaagttccttttccatcc
cctcagaggccaagaattctagttcagctatctccacatgataacctgattcttagccaa
cctgtgtcatcaccccttccactgagcggcggcaagttttctacactacttcagaatcta
ggacctgaaaatgcagtaaccctacttgtatttgctgtgacggaacataaaattctcatc
cattcattgcgaccttctgttcttaccagtgtgacggaggcattagtctctatgatcttt
cccttccactggccttgcccgtatattcctctctgtcccttggcgctggcagatgttcta
agtgcaccatgcccattcatagtgggaattgattcaagatactttgatctctatgaccct
ccaccagatgttagctgtgttgacctagataccaatacaatttctcaaactggagataag
aaagctattgcatggaagatcttaccaaagaaaccttgtaaaaatctgatgaacacttta
aataatttatatcagcaactggcagaattgcaacagagaccaagagaagatgcgttaatg
gaattagcgatgaatgactacgattttaattctgggaagaaattgcatctgttagatttg
gagatccaagaagcattcctgtgtttcatggcctcaatactaaaaggttacaggtcttac
ctcagaccaataacagaggcaccctctgaaacagccacagatgctagttctctctttgaa
ctacaaggtttcctcaaaagtcgagatcgttcccatcagaagttctacacactgatgacc
aaaactcagatgttcattcgcttcatcgaagagtgttcttttgtcagtgataaggacgca
agccttgcattttttgatgactgcgtagataaagtagatatggacaaaactggagaaaca
cgacttatagagctggatgagtcatacaagagtgagcacacagttttcataacaccacct
gagatccctcatctgccaaatggtgaagagcaccctctgcaatacagctacaatggattt
ccagtgttaaaattagatttgtttgagcgacctgaaggacttctcacagcaccaaataac
aaactgtcctcaaaagccagtagtccgaacagcccatcgcccatgttcagaagaactaaa
caggaaattaaatctgcacataaaattgctaagaagtactcatccataccacagatgtgg
tccaggtgtttgttacgtcactgctatggtctttggtttatctgccttcctgcatatgtg
aaagtctgccattcaaaagtccgggctctgagaactgcatatgatgtgctgcaaaaaatg
cataccaaaaaaatagatcctcctgatgaggtgtgctaccgagtactcatgcaactgtgt
ggacagtacggtcagcctgtgctagcagtgagagtgctttttgaaatgcagaaagctggt
attgaccctaatgcgattacttacggctactataataaggcggttttggaaagtacgtgg
ccttcaagcaatagaggcggatatttcctctggatgaaaatacgaaacgttgttttagga
atagcacagttcaagaaagcattgaaaaagctaccagcaagcacctcacatacagccatt
cctgggggactttcagactttggcaataatacatcattcaaagaagaaaccaggcaaggg
aaaacttgtcttcaagatatacaagaacaaaaagaggacaagagagaaagtgactccagt
tctctatccgaagtggagagcacaaaagagagtggtgactgcctgcctaaactaaattat
cagaactcaagtaatgccaaagctgcttctagcatagtgcgactcaacggtacggttgac
aacaccatagcagaagatagtgcagagacttctgttggattgctgtttacatcatctttt
gaggatgtcagtgaagcagaagttataaaaagtaaatccttaagaaagagacataaaagt
gcagtagaacctgacttaagggagataccatgggaaagcaggaaccgtaacctgagcgga
gatggcttggtgggactcatgataaatagaataaatcaggacccaaaccctggagaaatt
gttgaaaagctaggagctgatgccaaaatcctgtctagtgcattacagaaaaatataagg
ccaaagactcttaatatcagaacttcttctttaggatctaagagagaaagcctggagaaa
gaatctagtgatgaagatgcagcttttgattgcagttttacagataaaacagagtctcct
gttatctttgatctggaagacttggatgcagaacctgaaacacctacagcggtgaaatcc
tccgttgagaaatctagaaggctgcaaagaaagagcagcttcccagtaaagccagttgaa
aagacagatgttgaaactggatttgatccactgtccctgctagttgctgagacagaacag
cagaaagaggaggaggaggaggaggatgatagaagtgtttctactccatctgcaagacga
gacttagctgaagaaatagtcatgtacatgaacaatatgagcagccctttgtcaagtcgt
gccccaagcattgagttgcaaaaacccaatgatgacagaaatgctcataaaaagagccca
acagtaatccagccttgtaggaggtccagccttcccccgaactccccaaggccatccggt
cttaccaaatccaagagttaccatgcaaaaagtgaagaaaagccaagagacaggctctgg
tcctcccctgcttattccccaaacagcccagccaaggaacagccacaggatggaagcagt
gcattaacacttgtgtcttcaccgtcattcaacttggatacgctgttgacaccaaagttt
gatgtcctaaaaagcagcatgttttctgctggaaaaggggttgcagagaaggctagcaag
tggtattcaaaatttacaatgtatgctgcgtcctcaaaggatcaaaattcagaccgagca
agtgtttcatctcttggagctctggactcagaatctacttctctaactgatgaagatgtc
tgcaatgattttgaaagtgcttctcctcacgagaacaccgcatcagaaattaagagaatt
ggcctcagcaggacaagcctagaaagctcggcttcccacgatggctcatcaaaacaattt
gaccagtgtgcaggttctctttcaaagttccctctacctgacaaatcagagttaatctct
tcttgcagtacaagtagtaccagtgtgtttcagaactacgctatggaggtcctcatctca
agctgttcacgatgtcgaacttgtgactgtttggttcatgatgaagaaatcatggcaggt
tggacagcagatgattcaaatctcaataccacatgtccattctgtggaaatctatttctg
ccttttttaagcatagaaatcagagatcttcggcgacctggacgttatttcctgaagtcc
agcccttctacagaaaacatgcagttgccatcacttttttccagtcggagcgggaagtcc
tgtaacaccacagctactgttggcctcgctacatctctgatgtctgttcaagaggatata
aattccaacagcaaatctaagcagcatgacaatatttgtgccagaagtatccagatcccc
tcgggaagaaggcagaatacctctgggtcagagtgtacaagtcaccctgtagcaaggagt
atcagtacttttggtccgttggaagaagatgagaaggaaaaccagaagatcaaccatatc
attcctactggtagcctgcctgctactttgcaaggaccaacagattccttgggcctggaa
tggcgcttacctagtcctgatcctatcacagttccttatctcagtcctctagtggtatgg
aaagagcttgagagcttacttgaaaatgagggggatcatgcgataacagtggcagacttt
gtagatcatcatcccattgtgttctggaatttggtgtggtatttcagacgcttggacttg
cccagcaacttaccaggattgatacttacttctgagcactgtaataaaaactccaagatt
ccacggaactgtatgtcagaggacagtaaatatgttctgattcagatgctatgggacaat
atgaaattgcatcaggatccaaggcagcctctgtatattttgtggaatgctcagagtcaa
aatcgcactcttttgtttgagacccagaagtacccaatggtccatttactgcaaaaagat
gatgactcttttaatcaggagctcttgagaagtatggtgaaaagcattaagatgaatgat
gtatacggaccgatgagtcagatattggagaggctgaacaaatggccacatattaaaaga
cagcggagcctttatagagaaattctatttctttcgcttgttgccctgggaagagataac
attgatatagatgcttttgaccgagagtacaaaatggcctatgatcgtctcacggctagt
caggtgaagaatactcataattgtgatagaccaccaagtactggagtgatggaatgcaga
aagatttttggagaaccatatctttaa
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