Cuculus canorus (common cuckoo): 104065233
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Entry
104065233 CDS
T08597
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104065233 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104065233 (DHX36)
03012 Translation factors [BR:
cuca03012
]
104065233 (DHX36)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104065233 (DHX36)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104065233 (DHX36)
Translation factors [BR:
cuca03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104065233 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
Sir1
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
104065233
NCBI-ProteinID:
XP_053930757
LinkDB
All DBs
Position
9:24897522..24919009
Genome browser
AA seq
986 aa
AA seq
DB search
MSYEHRRDWGRGRGRGGSSDGGATSASSDGAGHGGRGGGRGRHPSHLKGREIGLWYARKQ
GQKSKETDRQQRAVVRMDERREEQIVQLLNTVQTKTEKEQEAMSWWSGDEEGPTPEQPAK
AKPEAEKAPVRQRPVLEKTFLDQDVEYLFEKNEQDTDLDEQLKEDLRKKKSDPRYIEMQR
FREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCT
QPRRISAISVAERVAAERAEACGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSD
KHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNIRLDLKVILMSATLNAEKFSEYFDHCP
MIHIPGFTFPVVEYLLEDVIEKLRYTPENTDRRPRWKKGFMQGHVSRPEKEEKEEIYRER
WPEYLRQLRGRYSPSTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNIS
TLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDD
VVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL
LDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDR
QEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVAD
ARRKELSKNTKSDHLTVVNAFMGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFA
EHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTK
TDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD
KDQDTIAVDEWIVFQSPARIANLVKNLRRELDDLLQEKIENPHPVDWNDIKSRDTAVLTA
IIDLITTQENESARNYAPRFQSERYS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcatcgccgggattggggccgcggtcgcggccggggcggcagcagcgat
ggcggcgctacctccgcctcctcggacggagcgggccacgggggccgcggcggcggccgg
gggcgccaccccagccacctcaagggccgcgagatcgggctgtggtacgcgcggaagcag
ggccagaagagcaaagagacggaccggcagcagagagctgttgtgcgcatggatgaacgc
cgggaagaacagatcgtgcagctgttgaacactgtccaaactaaaaccgaaaaggagcaa
gaagccatgtcatggtggtctggggatgaagaagggcctacaccagaacagccggcaaaa
gcgaaaccagaggctgagaaagctcctgtaagacagagaccggtcttggagaaaacattt
cttgatcaggatgtggaatatctctttgaaaaaaatgagcaggatactgatttagacgag
caacttaaagaagacttaagaaagaagaaatctgatcctagatatattgaaatgcagaga
ttccgagagaaacttccttcatatgggatgagacaggaacttgtaaaccttataaacaat
aatcgagtaacagtgataagcggtgaaactggttgtgggaagacaacccaagttacacag
ttcatcctggatgattacatagagcgagggaagggctcgacgtgcaggatcgtttgtacg
cagcccaggaggatcagcgctatctcggtggcagagagagttgctgctgaaagggcagaa
gcgtgtggtaatggcaggagtacaggataccaaattcgtctgcagagtcggttaccaagg
aaacaaggttcaattttatactgtaccacaggaattgtcctacagtggctccagtcagat
aagcacttgtccagcattagccatgtagtccttgatgaaattcatgaaagaaatcttcag
tcagatgttttaatgagcattattaaagatcttttgaatattcgtttggatctgaaagta
atactgatgagcgcaactttaaatgcagagaagttttcagagtattttgatcattgccca
atgattcacatacctgggttcactttccctgtggtggaatatcttctcgaagatgtaata
gagaagttgaggtatactccagaaaacaccgaccgtcggccacggtggaagaaaggcttc
atgcaagggcacgtgagcagaccagaaaaagaagaaaaagaggaaatctacagggaacga
tggccagagtacttacggcagctgcggggcaggtactcacccagtactatagatgccttg
gaaatgatggatgatgacaaggtcgaccttgaccttatagcagcacttatcagacacatt
gttttggaagaagaggatggtgcaattctagtgtttcttccaggctgggacaacattagt
actttgcatgatctcctgatgtcacaagtgatgtttaaatcagataggtttattatcata
cctttacattcactgatgcctactgttaaccagacccaggtgtttaagaagaccccgcca
ggagtaaggaaaatcgtgattgctaccaacattgcagagactagcattacgatagatgac
gtggtgttcgttatagatggtgggaaaataaaggaaactcactttgacacacagaacaac
atcagcacaatggcagcagagtgggttagtaaagctaacgccaagcagaggaaaggtcgt
gcaggaagagttcagccaggccactgttaccatctatacaatggactacgtgccagcctt
ctagatgattatcagttaccagagatcttgaggacgcctttggaagagctctgcttacaa
atcaagattctaaagcttggtggaattgcttattttctgagcaagctaatggatccacca
tctcgtgatgctgtaatgttggccataaaccatctaatggagctgaatgctttggacaga
caagaagaactgactcccctaggtgtgcatttagcacgattaccagttgaaccgcatatt
ggaaaaatgatactctttggagctttattctgctgcttggatccagtacttacgattgca
gctagcctcagcttcaaagaccctttcgtcattcctctgggcaaagagaaagtagcagat
gcaagaagaaaggagctgtcaaagaacactaaaagcgaccatctaactgtggtgaatgct
ttcatgggctgggaagagactcggcgccgtggtttcagaactgagaaagactattgctgg
gaatatttcctgtcttcaaatacgctccagatgctgcataacatgaaaggacagtttgct
gaacatctccttgcagctggatttgtgaacagcagagaccccaaggatcccaaatccaat
accaactcagataatgagaagttgctcaaagcggtcatctgtgctggcttatatccaaaa
gttgcaaagatccggccaagcttcagcaaaaagagaaaaatggtgaaagtctgcaccaag
acagatggaacagttaatattcatcctaaatcagttaatgtggaagaaacggagttccat
tataactggcttgtttaccatttgaagatgagaactagcagtatttacttatatgattgt
acagaggtctctccatactgtctcttgttcttcggaggagatatatctattcagaaggat
aaagatcaggatacaatcgctgtggatgaatggattgttttccagtctccggcaagaata
gcaaacttagttaagaacttaagacgagagcttgatgatcttctacaagaaaaaatagaa
aaccctcatcctgtggactggaatgacattaaatccagggatacagcagtactgacagct
attatagacttaatcacaacacaggagaatgaaagtgccagaaactatgctccacgattt
cagagtgaacgctatagttga
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