Cuculus canorus (common cuckoo): 104065294
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Entry
104065294 CDS
T08597
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
104065294 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
104065294 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_4th
Ig_DSCAM-DSCAML_C
MAGP
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
104065294
NCBI-ProteinID:
XP_053929849
LinkDB
All DBs
Position
9:complement(26385697..26410782)
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AA seq
1444 aa
AA seq
DB search
MRAVAGWAVLVALGEWLWAGGEVPLADFYPFGPAQGDAATRKQDDGGSELRPLALPFPFF
GAGHTGLYVNNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRRAGDVYYRESTE
QPILERASRDIVQYFPEFPEFSAQWVFIATWYRVTFFGGNSFSPVNTFQIVLITDGKLSF
TIFNYESITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIADVEMTT
NVGIPGRWVFRIDDAQVQVGGCSNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLAGF
TGKRCHIDVDECLSHPCLNGATCLNGAGNFSCRCPTGFRGANCETEESPCESKVCQNGGR
CQAVNGTATCSCQPGYTGADCQTEVNECESSPCLNGGHCVDLLNNYTCVCLEPFVGQRCE
TDSSSCKDQSCRNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRVPSACLSQPCQNAGSC
VDTEQGYICECPEGYTGQDCRDKLWEGCECRNGGSCLEGNMTVCQCPPGFFGLICEFEVT
TTPCNMNTQCPDGGYCMEYGGSYLCVCHTDYGTNHTMPSPCDSEPCLNGGSCEVHDDSYT
CECPRGFLGKHCEKAKPRLCSTGPCRNGGTCREADGEYHCSCPYRFTGKHCEIGKPDPCA
SGPCQNGGTCFHYIGKYKCDCPLGYAGRHCEIVPSPCFLSPCENGATCEDLSGGYVCNCP
VGFVGKHCQSEVDCGVPSEVKHAQVSFNSTKVGSLAEYQCELGYTLSPHNHPRVCRLPGV
WTDPPECDEIDECRSQPCLNGGHCKDRIAEFLCLCEPGYTGAQCESDVDECHSEPCKNGG
TCRDLPGTFTCHCPEGFVGTQCETEVNACESSPCRNGGECESYRGSYLCVCPEGFFGYHC
ETASDPCFSSPCGSRGYCLSSNGTHSCTCKVSYTGKSCEKELLPPTSLKVERVEDTGVLI
SWHPPEDAAARQLIDGYAVTYVSLDGSYRRTDFVDRSRSAHQLRALASGRAYNISVFSVK
RNVNNKNDISRPVMLTTRTRPRPVEGFEITNVTASAITVQWALHRLKHSTVSRVRVSIRQ
LGDLADRTVELNSSVAKYTFLDLQPGERYIVHVTTLSGLGTEDHPSESLATAPFHVWTRP
LPPQNLTASRVTATSVSMAWEQPPAGAVEGYIINVTTTQSVKSRYVPNGKLMSYTVRDLL
PGQRYRLSVTAVQNTEQGQVHSEPVHLYVTTLQRDGAPERRWSQAGHPRILRNRLPPAFL
PELRLLADHDTAEEPSPAPRFTELVDGRGRISARFSTALAKSITVKTQPDAPVKLENTEV
SSQGSLALQLREGKSKSEGQNCSTNPCRNGGTCTRDAESYRCACRLGFKGRLCQLACKKV
PHSCTRLYSETKPFPMWEGGTCHYLYRRVYKVHQDICYKESCESTSSEKTTSRKPITNHT
LKKP
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccgtggcgggctgggccgtgctggtggccctgggcgagtggctgtgggccggc
ggcgaggtgcccctggcggatttctacccgttcgggccggcgcagggcgacgcggctacg
cgcaagcaggacgacggcggctccgagctgcgcccgctcgccctgcccttccccttcttc
ggcgcggggcacaccggcctctacgtgaacaacaatggaatcatttcattcctgaaggag
gtctcccagttcacgccagtggccttccccatctccaaggaccggcgtgtggtggccgct
ttctgggcggatgtggataaccgacgggcgggcgatgtgtattaccgggagagcaccgag
cagcccatcttggagagagcgagcagggacatcgtgcagtatttccctgagttccctgag
ttttccgcacagtgggtcttcattgccacctggtaccgagtcaccttctttgggggcaac
tccttctcgcctgtaaacactttccagatcgtcctcatcacagatggcaaactctccttc
accatcttcaactatgagtccatcacctggaccacgggtatgcacgccagcagtgggggg
gactttgccgggcttggtggcatcgcagcgcaggcaggttttaacgccggtgatggaaag
cgctacttcaacatccccggatcccgcaccgatgacatcgctgacgtggagatgacgaca
aatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaagtgggg
ggctgcagcaatacaacctccgtctgcctgacgctacggccctgcctgaatggggggaag
tgtatcgaggactgcatcacggggaacccctcctacacctgctcctgcctggccggcttt
accgggaagagatgccacatcgatgtggatgagtgtctctcccacccatgcctaaacgga
gccacctgcctcaatggtgccggcaacttcagctgcaggtgcccaacgggcttcagaggt
gccaactgcgagaccgaagagtcgccgtgtgagagtaaggtgtgccagaacggcgggagg
tgccaggcggtgaacgggacggcaacgtgctcgtgccagccggggtacacgggggcagac
tgccagacagaggtgaacgagtgcgagtccagcccatgcctcaatggtgggcactgcgtc
gacctgctcaacaactacacctgcgtgtgcctggagcccttcgtgggacagcgctgcgag
accgattcatcttcctgcaaggaccagagctgccggaaccggcagacgtgcaactacatc
cgtcctggccgctacatctgtacctgctccccaggttattatggcaacaactgccagtac
ggtgggccccgcgttcccagcgcctgcctctcccagccgtgccagaacgcgggcagctgc
gtggacacagagcagggctacatctgcgagtgcccagaaggctacaccgggcaggactgt
cgagacaagctttgggagggctgcgagtgtcgcaacgggggcagttgtctggaggggaac
atgaccgtctgccagtgcccgcctgggttttttggtctcatctgtgagttcgaagtcacc
accacaccatgcaacatgaacacacagtgcccggacggcgggtactgcatggagtatggc
gggagctacctctgcgtctgccacactgactacggcaccaaccacacgatgccatccccg
tgcgactcggagccctgcctgaatggggggtcctgcgaggttcacgacgactcatacacc
tgcgagtgtcctcgaggcttccttggcaagcactgcgagaaagccaagccgcgtctctgc
agcacggggccctgtcgcaacgggggcacctgccgggaggcggatggcgagtaccactgc
tcctgcccctaccgcttcactggcaagcactgcgagatcggtaagccggacccctgcgcc
tcggggccctgccagaacgggggcacctgcttccactacatcggcaagtacaagtgcgac
tgtccgctgggctacgccggccggcactgtgagatcgtgccttccccgtgcttcctgagc
ccctgcgagaatggtgctacctgcgaggacctcagtgggggctacgtgtgcaactgccct
gtgggcttcgtagggaagcactgccaatctgaggtcgactgcggcgttcccagtgaggtg
aagcacgcccaggtatccttcaactccaccaaggtgggctcactggctgaataccagtgt
gagctgggctacaccctcagtccacacaaccacccccgtgtctgccgcttgccgggcgtc
tggaccgaccctccggaatgcgatgagatcgatgagtgccggtcgcagccctgcctgaac
ggtggccactgcaaggaccgcatcgccgagttcctgtgcctctgtgagccgggttacacc
ggtgcccagtgcgagtcggatgtcgacgagtgccactcagagccctgtaagaatggcggg
acgtgccgggacctcccggggaccttcacttgccactgtcccgagggctttgtggggacc
cagtgtgagacagaagtgaacgcctgcgagtcaagcccttgccgaaacggaggggagtgc
gagagctacaggggctcctacctctgcgtgtgcccagagggtttcttcggctaccactgc
gagacagccagcgacccgtgcttctccagcccctgcgggagcagaggctactgcctgtcc
agcaacggcacccacagctgcacctgcaaagtcagctacacaggcaagagctgcgaaaaa
gaattgctgccaccaacctcattaaaggtggaaagggtggaggacactggtgtgttgatt
tcttggcacccacctgaggacgcagccgccaggcaactcattgacggctacgccgtgacg
tacgtatccctcgacggctcttaccgcaggacagattttgtggaccgaagtcgttctgcc
caccaattgcgggcattagcctccggcagagcctacaatatttctgtcttttcagtcaaa
cgcaacgtgaacaacaagaatgatatcagcaggcccgtcatgctcaccacgcgcactaga
ccgcgtccggtggaaggctttgagatcacgaacgtgacggccagcgccatcacggtgcag
tgggctctccaccggctcaagcactccactgtcagtagggtgcgggtctccatccgccag
ctgggggacctggcagaccgcaccgtggagctcaacagcagcgtggccaagtacaccttc
ctggacctgcagccaggagagcggtacatcgtccacgtcacaacgctgagcggcctgggg
acggaagaccacccctcagagagcctggccacggcgcccttccacgtgtggacaaggcct
ctcccccctcaaaaccttaccgcctcccgtgtcaccgccacctccgtgtccatggcatgg
gagcagccgcctgccggtgccgtggagggctacatcatcaatgtcaccaccacccagagc
gtcaagagccgctatgtgcccaatgggaagctcatgtcctacacggtgcgggacctgctc
cccgggcagcggtaccgcctgtccgtgacggctgtgcagaacaccgagcagggccaagtg
cacagcgagcccgtccacctctacgtcaccaccctgcagagggatggggctccagagaga
cgctggagccaagctggacacccccggatcctgcgcaacaggctgcctccagcattcctg
cctgaactccgcttgctagcggatcacgacacagctgaggagccctcgccagcccccaga
ttcaccgagctggtggatggcagagggaggatcagcgccaggttcagcactgcgctcgcc
aaatccatcactgtgaagacacagccagatgctccagtgaagctggagaacacggaggtg
tccagccagggcagtctggcgctgcagctacgcgaggggaagagcaagagtgaggggcag
aactgctccaccaacccctgcaggaacggaggcacctgcaccagggacgccgagtcctac
cgctgcgcctgccgcctgggcttcaagggccggctctgccagctggcctgcaagaaggtg
ccacactcgtgcacacggctgtactcggaaaccaagccattccccatgtgggaaggaggc
acctgccactacctgtacaggagagtctacaaggtacaccaggacatctgctacaaggag
agctgcgagagcaccagttccgagaagacaaccagcagaaaaccaatcaccaatcacaca
ctgaagaagccatag
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integrated database retrieval system
