Cuculus canorus (common cuckoo): 104065362
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Entry
104065362 CDS
T08597
Name
(RefSeq) protein argonaute-1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104065362
03036 Chromosome and associated proteins [BR:
cuca03036
]
104065362
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104065362
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104065362
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
104065362
microRNA pathway
RISC loading complex
104065362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
104065362
NCBI-ProteinID:
XP_053942643
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Position
22:complement(7073812..7102965)
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AA seq
857 aa
AA seq
DB search
MDPGPAGAAAGAYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggacccgggccccgcgggagccgctgcaggcgcttacctgccacccttgcagcaggta
tttcaagcgccgcgtcggcccgggataggaaccgttgggaagcccatcaagctcttggcc
aactactttgaagtggacattcccaagattgatgtgtatcattatgaagtggatatcaaa
cccgacaaatgcccacgcagagtcaacagggaagtcgtggagtacatggtacagcacttc
aaaccacagatcttcggcgaccgaaagccggtctacgatgggaagaagaacatctacact
gtcacggccttgcccatcggaaacgagcgggttgacttcgaggtgacgatcccgggggaa
ggcaaggacaggatatttaaggtctccatcaaatggatggccatcgtgagctggcgcatg
ctgcacgaggccctggtcagcgggcagatccctgtgcccctggaatctgtccaggcgctg
gacgttgccatgaggcacctggcttccatgaggtacactcccgtcggccgctccttcttc
tcccctcccgaaggttattaccacccactgggaggcggcagggaggtctggttcggtttc
caccagtcggtccggcctgccatgtggaagatgatgctcaacattgatgtgtcagccacc
gccttctacaaagcccaacccgtaatcgagttcatgtgtgaggtgctggacatccggaac
atcgacgagcagccaaaacccctgacggactcacagagagtgcgtttcaccaaggagatc
aaaggactgaaagtggaggttacccactgcgggcagatgaagaggaaataccgcgtgtgt
aacgtgacccggcggccagccagccaccagacgttccccctgcagctggagagcggtcaa
actgtggagtgcacagtggctcagtactttaagcagaaatacaacctgcagctgaaatat
ccgcacctaccctgcctccaggttggccaggagcagaagcacacgtacctgcccttggag
gtgtgcaacatcgtggccggccagcggtgcatcaagaagctcacagacaatcaaacatca
actatgataaaagcaacggccaggtctgccccagacaggcaggaggaaatcagtcgcctg
atgaagaatgccagctacaacttggatccgtacattcaggagtttgggatcaaggtgaaa
gatgacatgacggaggtgacagggagggtcctgccggcacccatcctgcagtacggaggc
aggaaccgggccattgcaactcccaaccaaggcgtgtgggacatgcgagggaagcagttc
tacaacggcattgagatcaaagtctgggcgattgcttgctttgccccgcagaagcagtgt
cgagaggaggtgctgaagaactttacggaccagctgcgcaagatctccaaggacgcaggg
atgccgatccaaggccaaccctgcttctgcaaatacgcccagggtgcagacagcgtggag
cccatgttcagacacctcaagaacacctattcagggcttcagctcatcattgtcatcctg
ccagggaaaacgccggtgtacgccgaggtgaagcgcgttggggataccctcctgggaatg
gccacgcagtgcgtccaggtcaagaacgtggtgaaaacctccccgcagactctttccaac
ctctgcctcaagatcaacgtcaagcttggtgggatcaacaacatccttgtgcctcaccag
cgctctgctgtctttcaacagccggtgatcttccttggggccgatgtcactcacccacct
gcaggagatgggaaaaaaccctccataacagctgttgtgggcagcatggacgcccacccc
agccggtactgtgccacggtgcgcgtgcagcgtcctcgccaggagatcatcgaggacttg
tcctacatggtgagggagctcctcatccagttctacaaatccacccgtttcaaacccacc
aggatcatcttctaccgcgacggcgttcccgaggggcagctccctcagatccttcactat
gagctcctagcaatccgagatgcctgcatcaaactggaaaaggattaccagcctggcatc
acctacatcgtcgtccagaaaaggcatcacacccgtctcttctgcgcagacaagaatgag
aggattgggaagagcgggaacatcccagcaggaacaacagtggacactaatatcacccat
ccctttgaatttgacttctacctgtgcagtcatgcaggcattcaggggacgagccggccg
tcccattactacgtgctctgggatgacaaccggttcaccgcagatgagctgcagatcctc
acgtaccagctgtgccatacctacgtgcgctgcacgcgctccgtctccatcccggcccca
gcctactacgcccgattggtggcattccgagcgcggtaccatctcgtggacaaggagcac
gacagtggcgagggcagccatatatctggacagagcaacggcagagacccccaggccttg
gcgaaggctgtgcaggttcatcaggacactttacgtaccatgtactttgcttga
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