Cuculus canorus (common cuckoo): 104065426
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Entry
104065426 CDS
T08597
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
cuca03015
mRNA surveillance pathway
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104065426 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
104065426 (RBM8A)
03015 mRNA surveillance pathway
104065426 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104065426 (RBM8A)
03041 Spliceosome [BR:
cuca03041
]
104065426 (RBM8A)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104065426 (RBM8A)
Spliceosome [BR:
cuca03041
]
Complex C
Other components
EJC/TREX
104065426 (RBM8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
104065426
NCBI-ProteinID:
XP_053907169
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All DBs
Position
28:complement(692973..696579)
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AA seq
174 aa
AA seq
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MADVLDLHEACGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARAREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQELMGQPISVDWCFVRGPPKGKRRSGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgctggacctgcacgaggcctgcggcgaggacttcgccatggacgaggac
ggcgacgagagcatccacaagctgaaggagaaggccaagaagcggaagggccgcggcttc
ggctcggaggagggatcgagggcccgcgccagggaggactatgacagcgtggagcaggac
ggggacgagccgggaccgcagcgctcggtggagggttggattctctttgtcaccggagtg
cacgaggaggcgacggaagaagacatccacgacaaatttgcagagtacggcgagatcaaa
aacatccacctcaacctggaccgacgcacggggtacctcaagggctacactctggtcgag
tacgagacctacaaagaggcgcaggcggcgatggaggggctgaatgggcaggagctgatg
ggacagcccatcagcgtggactggtgcttcgtccggggccctccgaagggcaagcgaagg
agcggacgccgacggagcaggagtccagacaggagacgccggtga
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