Cuculus canorus (common cuckoo): 104065427
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Entry
104065427 CDS
T08597
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104065427 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104065427 (VPS45)
Membrane trafficking [BR:
cuca04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104065427 (VPS45)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
104065427
NCBI-ProteinID:
XP_053907199
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Position
28:716155..744225
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AA seq
570 aa
AA seq
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MNAVLAVKQYVSRMIEDSGPGMKVLLMDRETTGIVSMVYTQSEILQKEVYLFERLDSPNR
EAMKHLKAICFLRPTKENVELLIQELRRPKYSIYFIYFSNVISKSDVKLLAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNLLGCCQGRSWDPAQLSRTTQGLTALLLSLKKCPMIRYQLS
SEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQRRKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVAERNLLEVSEVEQELACQ
NDHSNALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSSGLPGLLADLRNRGVAEKYR
KLVAAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKG
KLKDSQFPYLGPNTLRDRPQDIIVFLIGGATYEEALTVYNLNRTNPGVRIVLGGTTIHNT
KSFLEEVTASGFRGRSAESSHLAPRSSSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggtgctggcggtgaagcagtacgtgtccagaatgatcgaggacagcggcccc
ggtatgaaggtgctgctcatggaccgggagacgaccggcatcgtcagcatggtgtacacg
cagtcggagatcctgcagaaggaggtttacctcttcgagcgcctcgactcgcccaacagg
gaggccatgaagcacctgaaggccatctgcttcctccggcccaccaaggagaacgtggag
ttgctcatccaggagctgcggaggcccaagtacagcatctatttcatctatttcagtaac
gtgatcagtaagagcgatgtgaagctgttggctgaggctgatgagcaggaagttgtggct
gaagttcaggagttctacggcgattacattgcagtgaatccgcacgttttctccctcaac
ctcctgggctgctgccagggccgcagctgggatccggctcagctctccaggacaacgcaa
ggactgactgctctgcttttgtccctcaagaaatgccccatgattcggtaccagctctct
tccgagccagcaaagaggttggctgaatgtgtgaagcaagtcatcactaaagagtacgag
ctgttcgacttccgccgcactgaggttcctccgctgctgctcattctggaccgctctgac
gatgccatcaccccactcctgaaccagtggacctaccaggcgatggttcacgagctgctg
gggattaacaacaaccgcatcgacctctcccgcgtcccggggataagcaaggatctccga
gaggttgtcctgtcggctgagaacgacgagttctacgccaacaacatgtacctgaacttt
gcagagatcggcagtaacatcaagaacctcatggaggatttccagaggaggaaaccgaag
gagcagcagaagctggaatccatcgcagatatgaaggcctttgtggagaattacccgcag
ttcaagaagatgtccggcacggtatccaagcacgtgaccgtagtgggagagctctcgcgg
ctggtggcagagcggaacctgctggaggtgtcggaagtggagcaggagttggcctgccag
aacgaccattccaatgctctgcagaacgtgcgccgcctcctgcagaaccccaaggtgacg
gagctggacgccgcccggctggtgatgctctacgccctccactacgagcgccacagcagc
agcggtctgcccgggctgctcgcagacctccggaaccgcggagtggccgagaaataccgc
aagctggtggccgccgtcgtggagtacggagggaagcgggtccggggcagtgacctgttc
agtcccaaggatgccgtggccatcaccaaacagttcctcaaagggctgaagggcgtggag
aacgtctacacgcagcaccagcctctcctgcaagaaacgctggatcagctcatcaaaggg
aagctcaaggacagccagttcccgtacctgggtcccaacacgctgcgcgataggccccaa
gatatcatcgtgttcctcatcggaggggcgacgtacgaagaggcgttgaccgtctacaac
ctgaaccgcactaacccgggcgtccggattgtcctggggggcaccaccatccacaacacc
aaaagcttcctggaggaagtcaccgcgtcggggttccgcggccggagcgccgagagctct
caccttgcgccgaggtcaagcagcaggcggtga
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