Cuculus canorus (common cuckoo): 104065451
Help
Entry
104065451 CDS
T08597
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104065451 (TDRD12)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104065451 (TDRD12)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104065451 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
CS
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104065451
NCBI-ProteinID:
XP_053934527
LinkDB
All DBs
Position
13:2183270..2211055
Genome browser
AA seq
1234 aa
AA seq
DB search
MEVFVLEIENPGCFWVTMKGSAPYIVDDIEYENLKAEMSQFYDKSDKEVDELKLLMERGG
QVYVVFSEELKCWCRAVIKSVMYCTDHYQIQCFLVDYAKYIFVNSKDVRVALEAFTQIPY
RAKKCRLYRTRPVTLRIDFCEDTVKIVPAKKWDSAATHYFQNLLKAATHMRARLCALEDN
TFDVFLYVTIKDEKVCVNDDLVSKKFARFEEAEENTASSPDHQQNRMSLNIKSHPVTIAN
PALASRPVLSQEKGSTSLETGLTVCSSCPKETDRRSGTDLKENTEPIVNVIPGSPVREDA
VVRMDRPQEFLNSDPLKTHIIEDDQQSFQNLSEERNFIFLSNKIEPSSSLETAPLYDDLK
KELTRKLFLGPSFTQSYCWPPIAQGCDVVTVSYQGNDPLLYIPPILTVLQLGSCYKALPK
RNGPLVLILCPGWKKAQLVFELLKGFGRCSRQLHPMLIMLGRNKEEAGRVKIQGCEIIVT
TPYSFLRLFEHRSTLFCRLCHLVLDEVEVLLSEATEQVFTILNCYKKAVTSEEWKCSPQQ
IIAVGTHWNKHIVNLIKQFMNDPYIVITSVEEASIYGNVQQVVQPCMSSERTAVLVRTLD
VTHSSLQKVLVFTDSVNEAEMVHEALESNSIFSLKIHTESKLNLKCILGQWKEKCSAGTR
VVLVLTDDCMQPLGITDATCVIHFSFSSPRIFGHRLRSMSDNFCNVIKDSSVDQEYTKAR
SVLLLAESSACHALEILRYLQHAKAEIPPELCDITAKALEAEEDQKLSRPLCAYLKTFGI
CKNRTVCPDRHHINVQMDVPQNVPDKMLQMPGYVTIVPLHIVNATNYFGRIVDKEKDQYE
ILSEEMNEYFKEPDNKISVRNVEKLAVYGLCEKTLFHRVQVVEIPPKEEENVFFSIKIKY
IDEGRMSQAQSYQLLHLPARFQHLPPQAVEFIVCRVKPLDNEMEWNPEVTDYIHHKIKGK
LHEAKVVHTLGNTAWVDPMVRVSRLSGLKVSINEYNVRSEILSTGLGTDNPEHIPQLQEL
CRHVKVVDDAENTEPLSIEENTAGPENASSPENPSVQENPAENCGSSEIPTGTQPCGGVA
QTEETKDSTLDQQKCFYPEMKWFENEETVTVRVKIANASDCKCEFAKEKMVFSACSGGKL
YLADLELHRCILAEKSMYVVKDEEVVIVLVKEEKGAWCKLLKNKNTHLSFDFEHWEDLED
EGPFPVGIKKLHCTSAVTEECVDSSEESGTESDE
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctttgtattagagattgagaatccaggttgcttttgggttactatgaaagga
tctgcaccttacatagttgatgatatagaatatgaaaacctgaaagctgaaatgagtcag
ttctatgacaaatctgacaaagaagtggatgaactaaaactactcatggaaagaggaggc
caggtttatgtggttttcagtgaggaactcaaatgctggtgtcgagcggttattaagtca
gtgatgtattgtacagatcactaccaaatacagtgttttctggtggattatgccaaatac
atttttgtgaattcaaaggacgttcgagttgcactggaagcatttacgcagatcccgtat
agagcgaagaagtgtagactgtatcgcacgaggccagtgacattgcgtatcgacttctgt
gaagatactgtaaaaatagtaccagccaagaaatgggatagtgctgctactcattatttt
caaaaccttctcaaagcagcgacccacatgagagctaggttgtgtgccctagaagataat
acgtttgatgtgtttctttatgtgacgataaaagatgaaaaggtatgcgttaacgatgat
cttgtctcaaagaaatttgctcgttttgaggaagctgaagagaatacagcaagttctcca
gatcatcagcagaaccgaatgtcactaaatattaagtctcatccagtgacaattgctaat
cctgcgcttgcttccaggccagtgctgtcacaggagaagggatcaacaagtcttgaaaca
ggtcttactgtttgcagttcctgccccaaagagactgaccggaggtcgggcacagatcta
aaggaaaatactgagcctattgtcaacgtgattccaggttcacctgtcagggaagatgca
gtagttcgtatggacaggcctcaggaattcttgaattctgatcccctgaagacacatatc
attgaagacgaccaacagagttttcagaatcttagtgaagaaagaaattttatttttctt
agcaacaaaattgaaccgtcctcaagtctggaaacagcaccactgtatgatgatctgaaa
aaggaacttactcggaaactgtttctgggcccaagcttcacacaatcatactgttggcca
ccaatagctcaaggatgtgatgtagtcactgtctcctatcagggaaatgatcctctctta
tatattccaccaattcttacagttttgcagttgggaagttgctacaaagccttgccgaaa
aggaatgggccacttgtgctcatcttgtgtcctgggtggaagaaggcacaacttgttttt
gagctactgaaaggatttgggagatgcagcagacagcttcatccaatgttgatcatgctt
ggccggaacaaagaagaagctggaagagtgaaaatccaaggatgtgaaataatcgtgact
acgccatacagcttcttgagactgtttgaacatcgcagtacgttattttgtagactttgc
catcttgttcttgatgaggttgaggtgctgctctccgaggctactgagcaggtttttact
atcttaaattgttacaagaaagctgttacttctgaagaatggaagtgttcaccacagcag
attattgctgttggaactcattggaataaacatatagtgaacttgataaagcagttcatg
aatgatccttacattgtgataacatctgtggaagaagcttctatctatggaaatgtgcag
caggttgtgcagccttgcatgagcagtgagagaactgccgtgttagtcagaacactggat
gtgacccacagtagccttcagaaggtgctggtgttcactgactcagtaaatgaagcggaa
atggttcatgaggcactggagagcaactcgatattttccttgaaaatacatacagagagc
aagctgaatttgaagtgtatcttagggcagtggaaagaaaagtgcagtgctggcactcgg
gtcgtgttagttttaacagatgactgcatgcagcctttgggaatcacagatgctacttgt
gtgatacatttcagcttttcttctccaagaatctttggtcatcgtctgcgcagcatgtct
gacaacttctgtaatgtcataaaggattcttctgtagatcaggaatacacaaaggcaagg
tcagtcctcctgctagcagaaagcagtgcctgtcatgcacttgagatcctacgctatctg
cagcatgcgaaagctgaaattccaccagaactgtgtgatatcactgccaaggcgctggaa
gctgaagaagatcagaaactttcaaggcccctctgtgcctatcttaaaacatttgggatt
tgcaagaatagaacggtgtgtccagatcgtcatcatatcaatgtacaaatggatgtgccc
cagaatgtgccagataaaatgctgcaaatgcctggatatgtgacaatagtgcctctccac
attgtaaatgcaacaaactacttcggacgaattgtagataaagaaaaggaccaatatgaa
attctttctgaagaaatgaatgagtatttcaaggaacctgataataaaatctctgttaga
aatgtggagaagctggcggtttatggattatgtgagaaaacactttttcacagggttcag
gtggtagagattcccccaaaagaggaggaaaatgtgttcttcagtatcaaaattaaatac
attgatgaaggcagaatgagccaagcgcagagctatcagctgcttcacttgcctgcaaga
ttccagcatctgccacctcaggctgtggaattcatcgtttgtagggtgaaacctctggat
aatgaaatggaatggaacccagaggtaactgattatattcatcacaaaattaaaggaaaa
ctacatgaagcaaaagtagtgcataccttgggaaatacagcttgggttgacccgatggtc
cgggtcagcaggctgtcaggtttgaaggtgtctatcaatgagtacaatgttcgatcagag
attctgtctacgggtctgggaactgacaatccagagcacatcccacagctgcaagagttg
tgcaggcatgtgaaggtggtggatgatgcagagaacacagaacctttaagcatagaggag
aatacagctgggccagagaacgcatccagtccagagaatccatcagtacaagaaaatcct
gctgaaaactgcggttcttctgaaattcctactgggactcagccatgcggtggtgtagct
cagactgaggaaacaaaggactctaccttggatcagcagaaatgcttttatccagaaatg
aagtggtttgaaaatgaagagactgttacagtgagggtgaaaatagcaaatgcgtctgac
tgtaaatgtgagtttgctaaagagaagatggttttcagtgcttgttcaggaggcaaactg
tatctggctgacctggagctgcatcggtgtatacttgcagaaaagtctatgtatgtcgtg
aaggatgaagaggtggttattgttcttgtgaaggaggagaaaggagcgtggtgcaaacta
ctgaagaacaagaatacacacttgtcttttgattttgaacactgggaagatttggaagat
gaaggtccttttccagttggtattaaaaaactgcattgcacttctgcagtaactgaagag
tgtgttgactcctcagaagaaagtggtacagaaagtgatgagtag
DBGET
integrated database retrieval system
