KEGG   Cuculus canorus (common cuckoo): 104065505
Entry
104065505         CDS       T08597                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
cuca  Cuculus canorus (common cuckoo)
Pathway
cuca04137  Mitophagy - animal
cuca04144  Endocytosis
cuca04145  Phagosome
cuca04148  Efferocytosis
cuca05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104065505 (RAB5B)
   04145 Phagosome
    104065505 (RAB5B)
   04137 Mitophagy - animal
    104065505 (RAB5B)
   04148 Efferocytosis
    104065505 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104065505 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cuca04131]
    104065505 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cuca04147]
    104065505 (RAB5B)
   04031 GTP-binding proteins [BR:cuca04031]
    104065505 (RAB5B)
Membrane trafficking [BR:cuca04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    104065505 (RAB5B)
 Endosome - Lysosome transport
    104065505 (RAB5B)
Exosome [BR:cuca04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104065505 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   104065505 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   104065505 (RAB5B)
  Exosomal proteins of melanoma cells
   104065505 (RAB5B)
GTP-binding proteins [BR:cuca04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    104065505 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 104065505
NCBI-ProteinID: XP_053907606
LinkDB
Position
29:complement(2611436..2618132)
AA seq 215 aa
MSSRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQSTSGAGGRSRGVDLHEQSQQSRSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atgagcagccgaggagcggccaggccgaacgggcagtcccaagccagtaagatctgccag
ttcaaactggtgctgctgggagagtcggcggtggggaaatccagcctggtgctgcgcttc
gtcaagggccaattccacgagtaccaggagagcaccatcggtgcggcgttcctgacacag
tccgtctgcctggacgacacgacggtaaagtttgagatctgggatacggccgggcaggag
cggtaccacagcctggcccccatgtactaccgcggcgcccaggctgccatcgtcgtctac
gacatcaccaaccaggagacgtttgcgcgggcgaagacatgggtgaaggagctgcagcgc
caggccagccccagcatcgtcatcgccctcgccggcaacaaggccgatctggccagcaag
cggatggtggagtacgaggaggcacaggcctacgcagatgacaacagcctcctgttcatg
gagacatcggccaagacggcaatgaatgtcaatgacctcttcctggccatcgccaagaag
ctcccgaagagcgagccgcagagcacgagcggcgcgggcggccggagccgaggcgtggac
ctgcacgagcagagccagcagagccggagccagtgctgtagcaactga

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