Cuculus canorus (common cuckoo): 104065505
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Entry
104065505 CDS
T08597
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04137
Mitophagy - animal
cuca04144
Endocytosis
cuca04145
Phagosome
cuca04148
Efferocytosis
cuca05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104065505 (RAB5B)
04145 Phagosome
104065505 (RAB5B)
04137 Mitophagy - animal
104065505 (RAB5B)
04148 Efferocytosis
104065505 (RAB5B)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104065505 (RAB5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104065505 (RAB5B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
104065505 (RAB5B)
04031 GTP-binding proteins [BR:
cuca04031
]
104065505 (RAB5B)
Membrane trafficking [BR:
cuca04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
104065505 (RAB5B)
Endosome - Lysosome transport
104065505 (RAB5B)
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104065505 (RAB5B)
Exosomal proteins of other body fluids (saliva and urine)
104065505 (RAB5B)
Exosomal proteins of colorectal cancer cells
104065505 (RAB5B)
Exosomal proteins of melanoma cells
104065505 (RAB5B)
GTP-binding proteins [BR:
cuca04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
104065505 (RAB5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
104065505
NCBI-ProteinID:
XP_053907606
LinkDB
All DBs
Position
29:complement(2611436..2618132)
Genome browser
AA seq
215 aa
AA seq
DB search
MSSRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQSTSGAGGRSRGVDLHEQSQQSRSQCCSN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgaggagcggccaggccgaacgggcagtcccaagccagtaagatctgccag
ttcaaactggtgctgctgggagagtcggcggtggggaaatccagcctggtgctgcgcttc
gtcaagggccaattccacgagtaccaggagagcaccatcggtgcggcgttcctgacacag
tccgtctgcctggacgacacgacggtaaagtttgagatctgggatacggccgggcaggag
cggtaccacagcctggcccccatgtactaccgcggcgcccaggctgccatcgtcgtctac
gacatcaccaaccaggagacgtttgcgcgggcgaagacatgggtgaaggagctgcagcgc
caggccagccccagcatcgtcatcgccctcgccggcaacaaggccgatctggccagcaag
cggatggtggagtacgaggaggcacaggcctacgcagatgacaacagcctcctgttcatg
gagacatcggccaagacggcaatgaatgtcaatgacctcttcctggccatcgccaagaag
ctcccgaagagcgagccgcagagcacgagcggcgcgggcggccggagccgaggcgtggac
ctgcacgagcagagccagcagagccggagccagtgctgtagcaactga
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integrated database retrieval system