KEGG   Cuculus canorus (common cuckoo): 104065629
Entry
104065629         CDS       T08597                                 
Symbol
RBBP5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
  KO
K14961  COMPASS component SWD1
Organism
cuca  Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cuca03036]
    104065629 (RBBP5)
Chromosome and associated proteins [BR:cuca03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     104065629 (RBBP5)
    COMPASS/SET1 complex (yeast)
     104065629 (RBBP5)
    MLL-HCF complex
     104065629 (RBBP5)
    MLL3/MLL4 complex
     104065629 (RBBP5)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40 WD40_CDC20-Fz Beta-prop_EML Beta-prop_CAF1B_HIR1 WDR55 EIF3I ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_LRRK2 Beta-prop_SCAP WDR54 Beta-prop_WDR75_1st Beta-prop_WDR11_1st Beta-prop_Vps41 Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 104065629
NCBI-ProteinID: XP_053943429
LinkDB
Position
24:complement(622506..683664)
AA seq 609 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQ
NRVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKT
ETQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPP
DAVQSSLADEGLGSEKKRQSSSDGPQAPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSK
KKQAGRPKGSKGKDKDSPFKPKLYKGDRGALPLEGAAKGKVQAELGQPLTGKEPSVSVVG
LLGGLALYRPQLNILIEFDLPRWHLLFKHSAAVKDRRNMTFFEVEVFIVFVVKLIPRPVL
LHRESTRGL
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgaacctggagctgctcgagtctttcggccagaactaccccgaggaggctgacgggacg
ctggactgcatcagcatggcgctcacctgcaccttcaaccggtgggggacgctgctggcc
gtgggctgcaacgacgggcgtatcgtcatctgggatttcctgaccaggggcatcgctaag
atcatcagcgcccacatccaccctgtctgctccctctgctggagtcgagatggtcacaaa
ctggtgagtgcatcgaccgataacattgtgtcgcagtgggatgtgctctctggagactgt
gaccagaggtttcgatttccttcgcctatcttgaaagttcagtaccaccctcgagaccaa
aacagagttttggtttgtcccatgaagtcagcgccagtgatgctaacattgtcagactcc
aaacacgttgtcctgcctgtggatgatgactctgatctcaatgtcgtggcctcctttgac
agacgaggggaatacatttatacgggcaatgccaaggggaagatcttggtcttaaaaaca
gagactcaggatcttgttgcatccttcagagtgacaactggaaccagtaacactacagct
attaaatcgattgagtttgcgcggaagggaagctgctttttaataaacacagctgaccgg
ataatcagggtgtacgatggccgtgaaattctgacttgtggacgggatggggaaccggaa
cccatgcagaagctgcaggatttagtgaacaggacaccgtggaagaagtgctgcttctct
ggtgacggtgaatacatagtggcaggatcagcgcgacagcatgccctgtacatatgggag
aagagtattggaaacctagtgaaaatcctccacggcaccagaggagagctgctcttggat
gtagcatggcatccagtccgaccgatcatagcttctatctcgagtggtgtggtgtcaata
tgggctcagaatcaagtggaaaactggagtgcctttgcgcctgacttcaaagagctggat
gaaaatgtagaatatgaagagagggagtcagagtttgacattgaagacgaagataagagt
gaaccagaacagacaggtgccgatgctgcagaagatgaagaagtggatgtaaccagcgtg
gatcccatcgcagccttctgtagcagtgatgaagaactggaggactccaaggctctgctt
tacttgcccattgctcctgaagttgaagatccagaagaaaacccctatggacctccgcca
gatgcagttcagagttctttagctgatgagggtctaggctctgagaagaagaggcagtcc
tcctctgatggacctcaggctccgaagaagaaacccaaaaccaccaacatcgaactacaa
ggagtacctaatgatgaagtccatccgctgctgggtgtgaagggagatggtaaatccaag
aagaagcaagcaggcaggcctaaaggatcaaaaggtaaagacaaagattctccatttaaa
ccgaaactctacaaaggggacagaggtgctttacctctggaaggagcagcgaagggtaaa
gtgcaggcggagctgggacagcctttgacaggtaaggaacccagcgtgagcgtcgttggc
ttgcttggtggccttgctttgtacagaccccaacttaatatactcatagagtttgatctt
cccagatggcacttgctctttaaacattcagctgctgtcaaggataggcgaaacatgacg
ttttttgaagtggaagtgtttatagtattcgtagtaaaactaattcccaggcctgtgcta
ttgcatagagagagcacgaggggtttgtga

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