Cuculus canorus (common cuckoo): 104065677
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Entry
104065677 CDS
T08597
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04110
Cell cycle
cuca04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104065677 (SMC3)
04114 Oocyte meiosis
104065677 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104065677 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cuca00535
]
104065677 (SMC3)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104065677 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
104065677 (SMC3)
Proteoglycans [BR:
cuca00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104065677 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104065677
NCBI-ProteinID:
XP_053928322
LinkDB
All DBs
Position
7:complement(7048469..7076037)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGNQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gatccattcagctcaaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
tttttttatgcgattcagtttgttctcagtgatgagtttagtcatcttcgcccggagcag
agactggctttgttgcatgaaggtacaggtcctcgtgttatttcggcatttgtggaaatt
atttttgacaattcagacaacaggctgccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtaatgaatcttcttgagagtgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggctacagctcctgattctcaacgactgaagttactaaga
gaagtagctggtaccagagtgtatgatgaacgtaaagaagagagtatttcactaatgaaa
gaaacagagggcaaacgagagaagatcaatgagttgttgaaatacattgaagagcgactg
cataccctagaagaggagaaagaagaactggctcagtaccagaagtgggataaaatgagg
agagcattagagtatacaatttacaatcaggaacttaatgaaacccgagctaagcttgat
gagctttctgccaaacgagagacaagtggagagaaatccaggcagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagacaaag
atttctgcaatgaaagaagagaaggaacaacttagtgctgaaagacaagagcagattaaa
cagaggactaaattagagctgaaggctaaagacttgcaggatgaattagctggcaacagt
gaacaaaggaaaagactgttaaaggagaggcaaaagcttcttgagaaaattgaggagaag
cagaaagaattagcagaaacggagccgaaattcaacagtgtaaaagaaaaagaagagagg
ggaattgctaggcttgcacaggctacacaggaaagaacagatctttatgcaaaacaaggt
cgaggaagccaatttacttccaaagaagaaagggataagtggataaagaaagaactgaaa
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggattta
gaggatacagaggcaaacaaggagaaaaatttggaacagtacagtaaactggaccaggat
cttaatgaggtgaaggctcgtgttgaagaactggacagaaaatactatgaagtgaaaaat
aaaaaggatgaactacagagcgaaagaaattatctatggagagaagaaaatgcagaacaa
caagctctcgctgcaaaacgcgaggatttagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggtatagacagcataaacaaagttttggagcatttccgt
cgaaaaggcataaaccagcatgttctaaatggctatcatggcattgtgatgaataacttc
gaatgtgagccagctttctacacttgtgttgaagttactgcagggaacaggttattttat
cacatcgtggattctgatgaggtcagtacaaagatcctaatggaatttaacaaaatgaac
cttcctggagaagttactttcctccctctgaacaagctggatgttcgagatactgcttat
ccagagactaatgatgccattcctatgatcagtaaactgagatacaatccaagatttgac
aaagcgttcaaacatgtgtttggaaagactctgatttgtcgtagcatggaggtgtctacc
cagctggccagagctttcactatggattgtattactctggaaggtgatcaagtcagccat
cgtggtgctttgactggaggttattatgacacaaggaaatctcggcttgaattgcaaaaa
gatgttagaaaggcagaagaagaacttggtgaacttgaagcaaagctcaatgaaaactta
cgcagaaacattgaaaggattaataatgagattgaccagttaatgaaccaaatgcagcaa
attgagacacagcagagaaagttcaaagcctctcgagacagtattttgtcggagatgaaa
atgctgaaggagaaaaggcagcagtctgagaagacgtttatgcccaagcaacgcagtttg
cagagcttggaggcaagtttacatgctatggagtcaactagagaatcattaaaagcagaa
ctggggactgatttgttgtctcagctcagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaattagacaactacaacaagaaaacagacaacttttaaatgaaaggattaaa
ttagaaggcattatcacaagggttgaaacatatctcaatgagaatctgagaaaacgctta
gaccaagtggagcaagaactgaatgagctacgagaaacggaaggtggcacagttcttact
gccacaacatcagaacttgaagctatcaacaaacgagtgaaggacacgctggcacggtca
gatgatctggataattctattgacaaaacagaagcaggaattaaagagcttcagaagagc
atggaacgctggaagaacatggaaaaggagcatatggatgccattaaccatgacacaaaa
gaacttgaaaaaatgaccaataggcaaggcatgcttctcaagaagaaagaggaatgcatg
aagaaaatccgagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaaactggagcagtgcaatacagagctgaagaaatacagt
catgttaataaaaaagctttagatcagtttgtaaatttctcggagcagaaggaaaaattg
ataaaaaggcaagaggagttggacagaggctacaaatctatcatggagctgatgaatgtc
cttgagctcaggaaatatgaagctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtattccagaagttggtgcctggtggcaaggccacattagtgatgaagaaagga
gatgtggagggcaatcagtcccaggatgaaggcgagggcagcactgaaagtgaaagggga
tctggatctcagagcagtgttccatctgtagaccaattcactggagttggcataagggta
tcgttcacagggaagcagggtgaaatgagagaaatgcagcaactttcaggtggacagaaa
tccttagtggccctagccctgatatttgctatccagaaatgtgatccagctccattttac
ttgtttgatgaaatcgaccaagctttggatgctcagcacagaaaagctgtttcagatatg
attatggaactagctgaacatgctcagtttattacaacaacgtttaggcctgaactgctt
gagtcagctgacaagttctatggtgttaaattcagaaacaaggttagtcatatcgatgtg
atcacagcagaaatggccaaagactttgtagaagatgacaccacgcatggttaa
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integrated database retrieval system
