Cuculus canorus (common cuckoo): 104065816
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Entry
104065816 CDS
T08597
Symbol
CILP2
Name
(RefSeq) cartilage intermediate layer protein 2
KO
K24436
cartilage intermediate layer protein
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
104065816 (CILP2)
Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
104065816 (CILP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
Ig_2
TSP1_CFP_C
I-set
CarbopepD_reg_2
TSP1_spondin
ig
Motif
Other DBs
NCBI-GeneID:
104065816
NCBI-ProteinID:
XP_053906325
LinkDB
All DBs
Position
27:6270171..6277239
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AA seq
1231 aa
AA seq
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MGELALALLAIATLHGAGATEPLENDLEPGKSSTAGKPWKAAPSLADLDLDTAGKGAEWT
SWFNIDHPGGDGDYESLEAIRFYYRGHVCERPVAIQARTTGWELPEEVGEVVHASPKKGF
RCVNKEQPQGKTCSNYHIRFLCPLEHIYWSHWSSWSPCSRSTCGSSGTQTRTRRCLNARL
LAPLKELKCKGKAVERRPCSTGPCPESAWMEWGAWGPCSRSCGSAGTRVRRRSCKKAKKV
PCTGRPTEVQKCPPSPCPACPGHTLQGTVTSATGTALPDARIYLEGRPPVLLARSDARGR
FAATGLCEGTAANVSVHREGFAPGLTPVVSNGSGVAVAHVRLHKLEKPYMVLHPKAKVRV
AGQEVTFCCKASGTPVPKKYYWYHNGTLLERKVHRYGSRLALRDLSPEQGGTYHCKASTE
AGAIRSAPAQLTVLAQDQQSCNPAPEPSLVELPRECPQDAAGSHYYNVGRCPPAPCAGSS
GDQSGCGADVGQCCGVRRMEMREIPCAGFLLPIKVVAECGCGPCAQPRVLVQGRVTAADT
GEPLRFGQIFLGGKKVGFTGYKGSFIIEVPPDTQRLVARFVDRQQRFVDAVKVLPFNGRG
GAIYQEVKMLRKKEPVELDGSQSNTILLGEANGREPVGELILPAGTFLRPSGEVFKGKVK
ASITFLDPRDMATASAASSDLSFANAEGEIVPLRTYGMFSVDFREGESGAELQTGPVEVR
MDAGQVWMPEHLQKMKLWSLNPETGLWEEEGILRPAGGRRRKREERTFLVGNLEIRERRL
FNLDVPEDRRCFVKVRAYSSEKFNPYDQLEGVVISLINLEPQPGYPSNPRAWGRFDSVVT
GPNGACLPAFCDGQRPDAYSAYVTATLGGEELEAVASSPKLNPNAVGVSQPYLGKLGYRR
LDHDDPNLKKTAFQINVAKPDPNNVDETNGPIYPYRSLEECEEAPVSANHFRFYRVEVDK
YEYNVVPFKESDLTSWTGDYLSWWPNPQEFRACFIKVRIEGPQEYMVRSRNTGGSHPRTR
GQLYGLRDSRSVRDMLLENTSGACVEFKCSGMLFDQSLVDRTLVSILPQGSCRRTAVNSL
LQEYLSRHPPVADNNHTAAFTMLAPVDPLGHNYGIYTVTDQNPRLAKEIAIGRCFDGTSD
GFSREMKADTGTAVTFTCQERPVGRESFFQRLLTAPAEALVEIRREMGAGEMRRAPPEVL
DFASGAQAPVPTAARRTPSSRRRTGQTRGQP
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggggagctggcgctggccctcctggctatcgccaccctgcatggtgccggggcaaca
gagcccctggagaacgacttggagccgggaaagagcagcactgcagggaagccctggaaa
gccgcccccagcctggcagacctcgacctggacacggcaggcaaaggagctgagtggacg
tcctggttcaacatcgaccaccctggaggagacggggactacgagagcctggaagccatt
cgcttctactaccgtgggcacgtctgcgagcggccggtggccatccaggcccgcactacg
gggtgggagctgcccgaggaggtgggcgaggtggtgcacgccagccccaagaagggtttt
cgctgcgtcaacaaggagcagccgcagggcaagacctgctctaactaccacatccgcttc
ctctgcccgctggagcacatctactggtcacactggtcctcctggagcccctgctcacgc
agcacctgtggcagcagcggcacccagacccgcacccgccgctgcctcaacgcgcggctg
ctggctccactcaaggagctcaagtgcaagggcaaagccgtggagcgccgcccgtgcagc
accggcccctgcccagagtcggcgtggatggagtggggcgcctggggcccctgttcccgc
agctgtggcagcgccggcacgcgtgtccggcggcggagctgcaagaaagccaagaaagtg
ccgtgcaccggccgccccaccgaggtgcagaaatgtcccccctcgccctgcccagcctgc
cccgggcacacgctgcagggcaccgtcacctctgccaccggcacggctctgccggacgcc
cgcatctacctggagggccgcccgccggtgctgctggcgcgcagcgatgcccgcgggcgc
ttcgccgcgacggggctgtgcgagggcaccgctgccaacgtcagcgtccaccgcgagggc
ttcgccccgggactgacacccgtcgtctccaacggctccggcgtggctgtggcacacgtg
aggttgcacaaactggagaagccctacatggtgctgcaccccaaggcgaaggtgcgggtg
gctgggcaggaggtgaccttctgctgcaaagcctcgggcacccccgtgcccaagaaatac
tactggtaccacaacgggacgctgctggagaggaaagtgcaccgctacggcagccgcttg
gcgctgcgggacctgtcaccggagcagggtggcacctaccactgcaaagccagcaccgag
gcgggcgccatcagatcggcaccggcacagctcactgtgctggcccaggaccagcagagc
tgcaaccccgcgcctgagccgagcctcgtggagctgccccgcgagtgcccgcaggacgct
gccggatcccactactacaacgtggggcgctgccctccggccccgtgtgccggcagctcc
ggcgaccagtctggctgtggggcggacgtggggcagtgctgcggcgtgcggaggatggag
atgcgggagatcccctgcgccggcttcctgctgcccatcaaggtggtggccgagtgcggg
tgcggaccctgtgcccagccccgcgtcctggtgcagggacgggtgacagcggccgacacc
ggcgagcccctgcgcttcgggcagatcttcttgggtggaaagaaggtgggtttcaccggc
tacaagggctccttcatcattgaggtgccgccggacacacagcgcttggtggctcgcttc
gtggaccggcagcagaggtttgtggatgccgtcaaggtcctgcccttcaacggccgcggc
ggggccatctaccaagaggtcaagatgctgcggaagaaggaaccagtggagctggatggc
agccagagcaacaccatcctgctgggggaggcgaacggccgggaacccgtcggggagctc
atccttcctgctggcaccttcctccggccctccggggaggtcttcaagggcaaggtcaaa
gccagcatcaccttcctggaccccagggacatggcgacggccagcgctgcctccagcgac
ctcagctttgccaacgccgagggggagatcgtccctctgaggacctatggcatgttctct
gtggattttcgggaaggggagagtggcgcagagctgcagacggggccggtggaggtgcgg
atggacgcagggcaggtctggatgccagagcacttgcagaagatgaagttgtggtccttg
aaccctgagactggtttgtgggaggaggaggggatcctccgtccggctggtgggaggcgg
agaaagagagaggaaaggaccttcctggtggggaacctagagatccgggagcggcgcctc
ttcaacctggacgtgccggaggatcggcgatgcttcgtcaaagtcagggcttacagcagc
gagaagttcaatccctatgaccagctggaaggggtggtcatcagcctcatcaacctggag
ccccagcctggctacccctccaaccctcgcgcgtggggtcgcttcgacagcgtggtgacg
gggcccaacggcgcctgcctgcccgctttctgtgacggccagcgccccgatgcctactcc
gcatatgtcaccgccacgttgggtggggaggagctggaagccgtggcctccagccccaag
ctcaaccccaatgccgttggggtgtcccagccctacctgggcaagctgggctaccgccgg
ctggaccacgatgaccccaacctgaagaagacggctttccaaatcaacgtggccaagcct
gaccccaacaacgttgatgagaccaacggtcccatctacccctaccgcagcctcgaggag
tgcgaggaggcaccagtcagcgccaaccacttccgcttctaccgcgtggaggtggacaag
tacgagtacaacgtggtgcccttcaaggagagcgacttgacctcctggaccggtgactac
ctctcctggtggcccaaccctcaggagttcagggcttgtttcatcaaggtgcggatcgag
gggccgcaggagtatatggtgaggtctcgcaacactgggggcagccacccccgcacccgg
gggcagctctacgggctgcgcgacagccgtagcgtgcgggacatgctgctggagaacacc
tcgggcgcctgcgtggagttcaagtgcagcgggatgctcttcgaccagagcctggtggat
cgcaccttggtctccatcctcccccagggcagctgccgccgcacggccgtcaacagcctc
ctccaggagtacctgagccgtcacccgcccgtggcagacaacaaccacactgccgccttc
accatgctggccccggtggacccgttgggtcacaactacggcatctacacggtgacagac
cagaacccgcgcttggccaaggaaatcgccatcggccgctgcttcgatggcacctccgat
ggcttctcgcgggagatgaaggcggacacgggcacagccgtcaccttcacctgccaggag
cggccggtggggcgggagagcttcttccagcgcctgctgacggccccggcagaggcgttg
gttgagatccgaagggagatgggggctggcgagatgcgccgcgctccccccgaggtgctg
gacttcgcctctggcgcccaagcccccgtccccacggccgctcgccggacccccagcagc
cggcggaggacgggccagacccgggggcagccgtga
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