Cuculus canorus (common cuckoo): 104065968
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Entry
104065968 CDS
T08597
Symbol
CDK13
Name
(RefSeq) cyclin-dependent kinase 13 isoform X1
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cuca01001
]
104065968 (CDK13)
Enzymes [BR:
cuca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
104065968 (CDK13)
2.7.11.23 [RNA-polymerase]-subunit kinase
104065968 (CDK13)
Protein kinases [BR:
cuca01001
]
Serine/threonine kinases: CMGC group
CDK family
104065968 (CDK13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
104065968
NCBI-ProteinID:
XP_009566799
LinkDB
All DBs
Position
2:complement(106628722..106677056)
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AA seq
1517 aa
AA seq
DB search
MPSTSEAAAGGSGGGRGWGSAAVEAAAAEKKRLHHRRRKRFAAQPQPPPPAPHPLLFPLL
QPPLLQPPLLQPPLPPQSLLFLAATGASSCCGDGGERKRPRGKRRSGSRHKRRRGRGGGG
GGSGAQEAEKRRGGGALSTLVEEYDDVSSQSEGLVGGGAGGAGSGPGSPASSPGRQRGGE
AERSGRSRREHRSGSRRSKERHREHRRRGEDKAQQEGAAAGASSSSSKSRSRHNHAGGQE
REGLKSSSGGGGSDGRRKGSLGSPGSGRKEREGKARRGRTKAAKEPPSAYKDPPKAYRDD
KPEPKAYRRQRSSPSPGRDDSPPLHRSLQSQRGRKSLSPVGGRSPLSPYSRRRSPSYSRH
SSYERGGDVSPSPYSSWRRSRSPYSPVIRRSAKSRSRSPYSSRHSRSRSRHRLSRSRSRH
SSISPSTLTLKSSLAAELNKNKKARAAEAAKASAKASNTSTPTKGNTEAATGAPQVNNVK
DLKKIKTEPTPSPTSTANLKNDKAKAKVSLPETKGENNLIADKITKQKPTAVKENKATVV
KQPPVTVKEKSKPSTPSVVTKEKDRIVALPTSTLPPLPLPPMLPEDKEPDSLRENLSVKS
VKEAEKKLRHLLADLPLPPELPGGADVSKSPEEKKPTVQSHSKRRPKICGPRHGETKEKE
IDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIK
ILRQLNHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENHI
KSFMRQLMEGLAYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYNSEESRPYTNKV
ITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSPC
PAVWPDVIKLAYFNTMKPKKQYRRKLREEFAFIPSAALDLFDYMLALDPSKRCTAEQALQ
CEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQMGMTDDSTAAKVPRKDLSLGMDES
RTNTPQGMQTSSQLKTQGNSSVALAKTSTGQQLNQNEVAILLNLLQSKTSVSLAQFAQVL
NIKVNPETQQQLNKINLPAGILSAGEKQSEQQQQQPPPPPPPPPEQEPLKQPTVTQPPVP
PAQLSQPKVETDAAQAAVQSAFAVLLSQLIKAQQTKQKDFVLEEKENGSGNEMSLQLRQP
PEPSTPVSVSRDDVESPAPGYPHLIKSLYTPAGQEDLVRQSEMRLLNRTPEQEPPRILPP
DQRPPEPPEPPPLTDEDLDYRTENQHLPITNSSGTDPHAGVKAALLQLLAQHQAQATTEE
PVQTSVDYQPRDSYVPGPDYKDNFVSSSFSSARYGSSDGIGSGSSGALERRSFLGNSDIQ
SLDNYSTASSHSGGAPPPSAFSDSFPSSVTGYGDIYLNTGPMLFSGDKDHRFEYSHGPIP
VLGSSSDASAGPESTHSLPTKMHNYSYGSNLQENPGGISHLRGQTWSSPAQGPGYSQGYR
GHISTSGVRGRGRGLPY
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcacctcggaggcggcggccggcgggagcgggggcggccggggctggggaagc
gcggcggtggaggcggcggccgctgagaagaagcggctgcaccaccggaggcggaagcgc
ttcgcggcccagccgcagccgccgccgccggccccgcacccgctgctcttcccgctcctg
cagccgccgctcctgcagcccccgctcctgcagccgccgctgccgccgcagtccctgctc
tttctggcggccaccggcgcctcctcctgctgcggggacgggggggagcgcaagcggccc
cggggcaagcggcgctcgggctcccggcacaagcggcggcggggccgcggcggcggcggc
ggggggagcggggcacaggaggcggagaagcggcgcggcggcggggcgctgagcacgctg
gtggaggagtacgacgacgtgagctctcagtccgaggggctggtgggcggcggcgcgggc
ggcgcgggcagcggccccggcagcccggcctcctcaccggggcgccagaggggcggcgag
gcggagcgcagcggccggtcccgccgggagcaccgcagcggcagccgccgctccaaggag
cggcaccgcgagcaccgccggcggggggaggacaaggcgcagcaggagggggcggcggcg
ggggcctcctcgtcctcctccaagtcccgcagccgccacaatcacgccggcggtcaggaa
cgggagggactcaagagcagcagcggcggcggcggcagcgacggccgcaggaagggctcc
ctcggctcgcccggcagcggcaggaaagagcgggagggcaaagcgcgccgtggccggact
aaagcggccaaggagccgccgtcggcttacaaagacccgccgaaggcctaccgagacgac
aagcccgagcccaaggcctaccggcgtcagcgctcgtcccccagccccggccgggacgac
agccccccgctgcaccgctccttgcagagccagcgcggccgcaagtcgctcagccccgtg
ggcggccgctccccgctcagcccctacagccgccgccgctcccccagctacagccggcac
agctcctacgagcgcggcggggatgtgtcgcccagcccctacagcagctggcggcggtcg
cggagcccctacagccccgttatccggagatcagcaaaatctcgaagcagaagtccatat
tcttcaaggcattcaaggtctcgtagcagacacaggttgtctagatccagaagtcgtcac
tcgagtatttctcctagtacattgactctgaagagtagcctggctgctgagctgaacaag
aacaaaaaagcgagagctgccgaggcagccaaagccagtgcaaaagcttccaatacttca
acacctactaagggaaacactgaagctgctacaggtgcacctcaagtgaacaatgtaaag
gacctgaagaaaataaaaactgagcctacgccttctcccacaagcactgcaaatttgaaa
aatgacaaggcaaaagcgaaagtctcacttcctgaaactaaaggggaaaataatttaatt
gcagacaaaattactaagcagaaacctacagcagtaaaagagaacaaagcaactgttgta
aaacagccaccagtcactgtaaaagagaaaagcaaaccgagtacaccaagtgtagtaacc
aaggagaaggatcgaattgttgcactaccgacctccacactgccacccttgcctttgcct
cccatgctgcctgaagataaggaacctgatagtttgcgagaaaatctttcagtgaagtcg
gttaaagaagcagagaagaaacttcgccatctacttgcagacttgccacttccacccgag
ttgcctggaggagctgatgtatccaaaagtcctgaagaaaagaaaccaacagttcagtca
cacagcaagagaagaccgaaaatatgtggaccacgacatggtgaaacaaaagaaaaagaa
atagactggggaaaacgctgtgtggataaatttgatatcattggtattatcggtgaaggc
acttatgggcaagtttacaaagccagagataaagacacaggtgaaatggtggcactaaag
aaagtacgtctggataatgaaaaggaagggtttccaattacagctattcgggaaattaag
attcttcgacagcttaatcaccaaagcattatcaacatgaaggaaatagtgacagataag
gaagatgctttggacttcaagaaggacaaaggtgcattttacctggtgtttgaatatatg
gaccatgacttgatgggactgctggaatctggtttggttcattttaatgaaaatcatatt
aaatcatttatgagacagctgatggagggcttggcctattgccataagaagaactttttg
cacagagatatcaaatgttcaaatattctactaaataatagagggcagataaagcttgca
gattttgggcttgctcggctctacaactcagaggaaagccgaccatataccaacaaagtt
attacattatggtatcggcctcctgaacttctgcttggagaagaaagatacacgccagct
atcgatgtctggagctgtggctgcatcctgggtgagctttttaccaaaaagccaatattt
caagcaaatcaagaacttgctcaactggaacttataagccgaatttgcgggagtccttgt
ccggcggtgtggcctgatgttataaaattagcttatttcaacacaatgaaaccaaagaag
cagtatcgtcgaaaactgagagaagagtttgctttcatcccttcagctgcattagattta
tttgattatatgcttgctctggatcccagcaagcgctgcacagctgaacaagctcttcag
tgtgagtttctgcgagatgtggaaccatctaaaatgcctcctccagaccttcctctgtgg
caggattgccatgagctgtggagtaagaaacgcagaagacagaagcagatgggcatgacc
gatgactcaacagcagctaaagtccctaggaaggacctgtctctaggcatggatgagagc
agaaccaacaccccacaaggcatgcaaacttcttcccaactcaaaactcagggcaactct
agtgtagcacttgcaaaaacaagcactggacagcagttaaaccagaatgaagtggcaatc
ctgctaaacctgctacagtctaaaacaagtgttagtttggcacagtttgcccaagtgttg
aatattaaggtaaacccagagactcagcaacaactaaataaaataaatcttcctgctgga
attttgtcagcaggtgaaaaacagtcagaacagcagcagcagcagccgccgccgcctcca
ccaccaccaccagaacaggaacctctaaaacagccgactgtcacacagcctcctgtacca
cctgctcagctgagtcagcctaaagttgagactgatgctgcccaggcagctgtgcagagt
gcgtttgctgttctgttgtctcagttaataaaggctcagcaaacaaaacaaaaagatttc
gtgttggaggagaaggaaaacggatcaggaaatgaaatgtcattacaactcaggcagcct
ccagagcccagcactcctgtgtctgtcagccgggacgacgtggaatctccagcacccggc
tacccacatctgatcaagtcattatatacgcctgcaggtcaagaggatttggttaggcag
tctgagatgaggcttctaaaccgaacacctgagcaagaaccccctcggatcttgcctcca
gaccagcgtcctccagaaccaccggagcctccgcctctcactgatgaagaccttgattat
cggacagagaaccagcatttgcctataactaactcttcaggaacagatcctcatgcagga
gtgaaagcagctcttctgcagctgcttgctcagcatcaagctcaggcgacaacagaggag
ccagtacaaacgagcgtggattatcagcctagagactcctacgtaccaggtcctgactac
aaggataactttgtgtcatcttccttctcatctgcccgttatggcagtagtgatggaata
ggaagtggatcatcaggagcattagaaaggaggagcttccttggaaactcagatattcag
tctttggataactacagtactgcttcatctcactctggtggtgcccctcctccatcggcc
ttttcagactcctttcccagctcagttactggttatggagacatttacctcaacactggc
cccatgctatttagtggagataaagaccataggtttgaatacagccacggcccaatcccg
gttctgggcagcagcagcgatgcttccgcagggccggagagtacgcactctttgcccaca
aagatgcataactatagctatgggagtaacttacaggaaaatcccggtggcatcagccac
ctgcgtggacagacttggtcttctcctgcccaaggaccgggctattcccaaggatacagg
ggacacattagcacatctggagtgagagggcgaggcagaggattaccatattga
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integrated database retrieval system
