Cuculus canorus (common cuckoo): 104066110
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Entry
104066110 CDS
T08597
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04140
Autophagy - animal
cuca04148
Efferocytosis
cuca05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104066110 (VPS11)
04148 Efferocytosis
104066110 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104066110 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104066110 (VPS11)
Membrane trafficking [BR:
cuca04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104066110 (VPS11)
Hops complex
104066110 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
Beta-prop_WDR36-Utp21_1st
TPR_GEMI5
zf-C3H2C3
Beta-prop_WDR3_1st
zf-RING_5
zf-RING_UBOX
Paralemmin
ISG65-75
zf-ANAPC11
zf-RING_11
CC_Bre1
zf_RING_Vps8_fungal
zf-C3HC4_3
zf-RING-like
DivIC
Motif
Other DBs
NCBI-GeneID:
104066110
NCBI-ProteinID:
XP_053942993
LinkDB
All DBs
Position
23:complement(4056653..4065215)
Genome browser
AA seq
918 aa
AA seq
DB search
MAAYLQWRRFLFFDREVLKEPPGPEGPGGKPFALPPGIAVCDSGRGSLVFGDMEGQIWFV
PRSLRPSGFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVATTENIQSYLLSVKDYPRLELDTRGCGLRCSSLSDPSQDLQFVVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLVIVSKDRKTSPKSEFAGNEAQNSDKQVL
NIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVRFDVETAIKV
LRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALRYIGKLPFDQAESNMKRYGKIL
MHHVPNETTELLKILCTDYRPSGDNEGPGMLEGQKANSEEFIPVFANNSRELKAFLEHMT
EVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFRTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEE
DCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQDEQR
IQKYREETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDPPPRKAAPEAAPRST
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtacctgcagtggcggcgcttcctcttcttcgaccgggaggtcctgaaggag
ccgccggggccggaggggccgggcgggaagccgttcgcgctgccgccgggcatcgccgtg
tgcgactcgggccgcggcagcctggtgttcggggatatggaagggcagatctggttcgtg
ccgcgctccctgcggcccagcggcttccaggcctacaagctgcgcgtgacgcacctctac
cagctgaagcagcacagcatcctggtgtctgtgggcgaggacgaggagggcatcaacccc
ctggttaaagtctggaacctggagaaaagagatggtggcaatcctctttgcacacgcatt
tttccagcaattccgggtaacaagcccacagttgtatcctgcctaaccgtccacgagaat
ctgaatttcatggctattggttttgcagacgggagtgttgtccttacaaaaggagacatc
acacgagaccgacatagtaagacccagatcctacacgaaggcagttatccggttactggc
cttgcattccgacagtctggcaaaacaacacatctgtttgtggcaaccacagagaacatc
cagtcttacttgctttcagtgaaggattatcctcgcctggaactagacactcgtggctgt
ggcttgcgctgctcatctctcagcgacccctcccaggacctccagtttgtcgtggcggga
aatgagtgtgtgtacctttatcaaccagatgagcgtggcccctgcttcgcctttgaggga
cagaagctgatagttcattggtatcggggctacctcgtcattgtctccaaggaccgaaag
acttctccgaagtcagagtttgctgggaatgaggcgcagaattcagacaagcaagtcctg
aatatctatgacttgtgcaacaaattcattgcgtacagctcgatctttgacgatatagtg
gatgtgttagcggagtggggctctctgtatgtactgaccagagacgggaagattcacgtc
ctgcaggagaaagatacgcaaaccaaacttgagatgctgttcagaaagaacttatttgaa
atggccattaacctggccaaaagtcaccacttggacagcgatggtttgtcagagattttt
cggcagtacggtgatcatctctataacaaggggaaccacgatggagccatccagcagtac
attagaactatagggaagctggaaccgtcgtatgttattcggaaattcctggatgctcag
cgtatccacaacctcactgcgtatctgcagacactccacctgcagtccctggccaatgca
gaccacactacgctcctgctgaactgctatacgaaactcaaagacagctccaagctggag
gagttcattaagacgagtgagagtgaggtccgctttgatgtggaaacagcaatcaaggtg
cttcgccaagcaggttactactcccacgctgtgtacctggcggagaagcatgcacatcat
gaatggtacctcaaaatccagctagaggacatcaagaactaccaagaggctttgcgctac
attggaaaactgccttttgatcaggcagagagcaacatgaagcggtatggtaaaatcctg
atgcaccatgtacctaatgagaccacagaactgctgaagatcctttgcactgattaccgg
ccatcgggagacaatgaaggccctggaatgctggaagggcaaaaggctaattcggaggag
ttcatcccagtctttgcaaacaactcccgggaactgaaggcttttctggagcacatgact
gaagtgcaagctgactctccacagggtgtctatgacactttactggaacttcggctccag
aactgggcacatgaacaagatgagcagatcaaggagaagctgcacaatgaagccctcacc
ctcctgaagagcggaaggttcagaacagtctttgacaaagcattggtcttatgtcagatg
cacaatttcaaagatggtgtcctctacctctacgagcagggcaaacttttccaacagatc
atgcactaccacatgcagaacgagcagtacaagaaggtgattgaggtttgcgagttgtat
ggagaccaagaggcttgtctgtgggaacaggctctcggatactttgcacggaaggaggaa
gactgcaaagagtatattgctgcggtgctgaaacacattgagaacaagaaccttatgcct
cctctgcttgttgtgcagacgctggctcataactccacagccaccctgtccgtgattaag
gattatctcgtcaacaagctgcagaagcagagccgccagatagagcaagatgagcagaga
attcaaaaataccgagaggaaactacgcggatccgccaggagattgaggagctgaaagca
agtcccaagatctttcagaagaccaaatgcagtatttgcaccagcgccctggagctgccc
tcggttcacttcctctgcggacactccttccaccagcattgctttgaaagctactccgag
agtgactcggaatgccccacttgcatgccagaaaaccgcaaagtgatggacatgatccga
gcgcaggagcagaagagagatctgcacgaccagtttcagcatcagctcaagtgttccaac
gatggcttctccgtggtcgccgactacttcggccgaggcgttttcaacaagctgaccctc
atcaccgacccgcccccgcggaaagcggcccccgaggcggcgccgcgcagcacctga
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integrated database retrieval system
