Cuculus canorus (common cuckoo): 104066128
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Entry
104066128 CDS
T08597
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104066128 (TRPC4)
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104066128 (TRPC4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
PHM7_cyt
YVC1_C
Motif
Other DBs
NCBI-GeneID:
104066128
NCBI-ProteinID:
XP_009566995
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Position
1:complement(26405208..26559958)
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AA seq
975 aa
AA seq
DB search
MAQFYYKRSVSAPYRDRIPLRIVRAESELSHSEKAYLNAVEKGDYASVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPVLLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLSMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLVPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPGNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWLWRHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLSNLQSAKNNKDAASLSENEEN
SESEGNKKGKKKNFSLFDITTMIHPRSATIASEAHNVSNGSAMMVSESTKEKHKRVNFVT
DIKNLGLFHRRSKTNSMEQCTNKIYTVSEEVSRQQAEEQCEETAELEEGELTMNCELNIQ
SPEEKCVLAESQNSSDSLDSLEERSICASDTEKTELQNSEPGTPQDQLDKELDISIDSDG
KEETIDQGDYVITKL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaagtgtcagtgctccctacagagatcgtatccctctt
cgtattgtgcgggcagaatctgaactgtctcattcagagaaagcctatctgaacgccgtg
gagaaaggagattatgccagtgtaaagaaagctctggaggaagcagaaatttatttcaag
atcaatattaattgcattgatcccctgggaagaactgcactccttattgcaattgaaaat
gagaaccttgagctcatcgagctgcttttaagttttaatgtatatgtgggagacgctcta
ttgcatgccatacgaaaggaggtagttggtgctgtggagctgctgttaaaccacaagaag
cccagtggggaaaaacaggtgccaccagtgcttctggacaagcagttttcggaatttaca
ccagatatcacacccattattctggctgcccacaccaacaattatgaaatcataaaactc
cttgtgcagaaaggagtctccgtgccaaggccacatgaggtccgctgtaactgtgttgaa
tgtgtctcaagttcagatgtggacagcctccgtcactctcgatccagactaaatatctac
aaggctctggcgagcccatcactgattgctttgtccagtgaggatcctttccttacagct
tttcaactgagctgggagctgcaggaactgagtaaagttgaaaacgaatttaagtcggaa
tacgaggaactgtcacgacaatgcaagcaatttgcaaaagatctcctggatcagacacgg
agttccagggaattggaaattattcttaattacagggatgataatagcttgatagaagaa
caaagtggtaacgaccttgcaagattgaaactggcaataaagtaccgtcaaaaagagttt
gttgctcagcctaactgccagcagctgctcgcatcccgctggtatgatgagttccccgga
tggagaaggcgacactgggctgtgaagatgttgacatgtgttgtgataggactccttttc
ccggtcttctctgtgtgctacctgatagctcccaaaagcccattagggctgttcatcaga
aagccatttatcaaatttatctgccatactgcatcctacttgacttttctgttcctgctg
ttgcttgcctctcagcacattgacaggtcagacttgagcatgcagggaccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggtgaaattaaacag
atgtgggatggtggactacaggactacattcatgattggtggaacctcatggattttgta
atgaactccttgtacttagcaacaatctctttgaaaattgttgcattttcaaagtatagt
gggttagttccacgggagagctgggacatgtggcatccaaccctggtggctgaggccctg
tttgcaatcgcaaacatttttagctccctacgcttgatctcattattcactgcaaattct
cacctgggacctctgcagatatctttaggaagaatgttgctggatattttgaagtttctc
ttcatatactgccttgtgctgctagcttttgcaaatggattgaaccagctgtacttctac
tatgagacaaatgaacctggcaactgcaaaggaatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgaaacactgcagtcattattctggtctatatttggactcatcaat
ctctatgtgaccaacgtgaaagcgaggcatgaatttacggaattcgttggggccacaatg
tttggtacctataatgtaatctctctggttgttctactcaacatgctaatagccatgatg
aataattcttaccaacttattgctgatcatgcagacattgagtggaagttcgctcgaaca
aagctctggatgagctactttgaagaaggaggaactctgcccactccttttaatgtcata
ccaagcccaaagtctctgtggtatctgatcaaatggttatggagacacctttgcaagaaa
aaaattagaagaaagcctgaaagttttggaacaatagggaggcgtgcagctgacaatctg
agaagacatcatcagtaccaggaggttatgagaaatctggttaagagatatgttgcagca
atgataagagatgccaaaaccgaggaaggactgacagaagaaaattttaaggagttaaaa
caagatatttccagctttcgttttgaagtcctgggtttgttaaaagggagcaagctgtct
aatttgcagtctgcaaagaataacaaagatgctgcctctctgtctgaaaatgaagaaaat
agtgagagtgaaggaaacaagaaaggaaagaaaaagaacttcagcctctttgacataaca
acgatgattcacccacgatcagccactattgcctctgaagcacacaatgtaagcaacggc
tcagcaatgatggtgtcagagtccactaaggagaaacacaagagagtgaattttgtaaca
gacataaaaaacttggggttatttcacagacgatcaaaaacaaactctatggagcaatgt
acaaataaaatatacactgtttctgaagaagtttcccgtcaacaggcagaagaacaatgt
gaggaaactgctgaactggaagaaggagaactgaccatgaactgtgaattaaacattcaa
agtcctgaagaaaaatgtgtgttagccgaatcacaaaatagcagtgactctttggattca
ctggaagagaggagtatttgtgcttcagacacagagaaaacagagttacagaactcagaa
ccaggcacaccgcaagatcagctggacaaggagttggacattagcattgacagtgatggg
aaagaggaaacaattgatcagggtgattatgtgataacaaagttgtga
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