Cuculus canorus (common cuckoo): 104066158
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Entry
104066158 CDS
T08597
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03030
DNA replication
cuca03410
Base excision repair
cuca03420
Nucleotide excision repair
cuca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104066158 (RFC3)
03410 Base excision repair
104066158 (RFC3)
03420 Nucleotide excision repair
104066158 (RFC3)
03430 Mismatch repair
104066158 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuca03032
]
104066158 (RFC3)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104066158 (RFC3)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104066158 (RFC3)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104066158 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
104066158 (RFC3)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104066158 (RFC3)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104066158 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
104066158 (RFC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
AAA_16
ABC_tran
DUF2247
ATPgrasp_ST
AAA_11
AAA_2
Sigma54_activ_2
AAA_24
Motif
Other DBs
NCBI-GeneID:
104066158
NCBI-ProteinID:
XP_053912135
LinkDB
All DBs
Position
1:24443323..24456014
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKHRPVSLGRLDYHREQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITAPSKKKIEISTIASNYHLEVNPSDAGNNDRVVIQELLKTVAQSQQ
LETSTQRDFKVVVLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSMSKIIGPIQSRCL
AVRVPAPSTEDICHVLSSVCKKEGLTLPQELAQRLAEKSGRNLRKALLMCESCRVQQYPF
TADQDIPEMDWEVYLRETANAVVGQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLTELL
NNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLDDMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtgggtggacaagcaccggcccgtgtctctcggcaggctcgactaccaccgc
gagcaggcggcgcagctccgcaacctggttcagtgtggtgacttccctcatcttttggtg
tatggaccatcaggagctggaaaaaagacaaggataatgtgtttgttaagagaattatat
ggtgcaggagtggaaaaactgaggattgagcatcagagtataacggcaccttccaaaaag
aaaattgaaattagcaccattgcaagtaattatcaccttgaagttaacccaagtgatgca
ggaaacaatgaccgtgtagtaattcaggaactcttgaagacagtagcacaatcccaacag
cttgagacaagtactcaacgcgattttaaagtggtggtgttaacagaagtcgacaaactc
actaaagatgctcagcatgccttgcgaagaacaatggagaagtacatggcgacctgcagg
ttgatcctgtgctgcaactccatgtcaaaaattataggacctattcagagcaggtgcctg
gctgtgcgagtgcctgctcccagcactgaagatatctgccatgtcttatccagtgtgtgt
aagaaagaaggcctgactcttcctcaggaactggctcaaagacttgcagagaaatctggc
aggaatcttcggaaagcattacttatgtgcgagtcctgcagagtacaacagtatcctttt
actgctgatcaagacattcctgagatggactgggaagtttatttgagagaaactgcaaat
gctgttgttggtcaacagacaccacaaaggcttctagaggtccgtggacggctttatgaa
ctcctgacacactgcattcctcctgagattataatgaagggcctcttgacagaacttcta
aataactgtgatggacagctgaaaggagaagttgcacagatggctgctttctatgaacac
cgcctgcaactgggcagcaaagctatttatcatctggaagcatttgtagcaaagttcatg
gcaatttacaagaagtttatggaggatggactagatgacatgatgttctaa
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