Cuculus canorus (common cuckoo): 104066163
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Entry
104066163 CDS
T08597
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104066163 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cuca04091
]
104066163 (FREM2)
Lectins [BR:
cuca04091
]
C-Type lectins
Lecticans
104066163 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
HYR
Motif
Other DBs
NCBI-GeneID:
104066163
NCBI-ProteinID:
XP_053910711
LinkDB
All DBs
Position
1:26935309..27062011
Genome browser
AA seq
3162 aa
AA seq
DB search
MMRAALPAAPRRLLAGLLLLAGCAGLGEPQPGSAAASSPWEPEAAAVVVANRGLRVPLGR
SAWLDPARDLVLRVQPGDRCHLTVLDEDPLWQRPGRLSPRRFPCDFGPREVRYWHLGGRS
PARDRVRLQLRYDSASRALVLPLALQVEVLFTQLEIVTRNLPLVVERLRGTSSPLDARSL
EFAFEPGRQRCRVGLLPPLAGLPRYGEIVGIPAAAAAAGGEAAGGVPMPDSMWDCEEFLR
LGLRYRHTAAGGSPNRDLVPLVAELREAAGAGALLKREYFQVLVRIRAGSENVAPKPSFL
AMLMMEVDQFVLTALTPDMLAAEDAETPPDLLLFNITSPFGPGQGHMVSTDDRSLPISSF
SQRDVRELRIAYQPPVEDSDRERLFELELEVLDPEGAASEPFAFVIVVKPMNTLAPVVTR
NTGLLLYEGQSRPLSGPGPSPNLVISDEDDLEQVRVSVVAGLRHGHLTLLDDTPEPAAPR
KHFTVAELAAGRVIYQHDGSESPLSDNLVLRLEDGGSRHRVEFLFPITVVPTDDQPPLLN
ANTGLDMAEGETVPITTRALSATDIDSQDAILLFTVESGPAAGRLLLRQVQPPPDWEDED
EDESFSWRRVAGSAGSSIIYEKPVREWLQQDIVEGRLYYHHFGPHSPGPAVVLDQFVFRV
QDDNDPPNRSGPQTFMIRVHPIDRLAPELHSSSSLHLIVAEQQVTPLRRKHLCYTDQDSG
DRELRYTITQPPTDTDSNHPPDVYGARLGSLVLTEDHSVEVTHFTQAQINHHKISYRPPQ
EELGVAPHLIQFQYQVQDAAGNAAEGTFTIYLQPVDNQPPEITNTGFNLPEGGSHVLSPN
ELDASDTDTELAHLRFILTQPPQYGQLQLSGYSLIPGGVFGLEDIRQGRVVYVHSGAETN
SDTCGLDVSDGVHFVPITLKMNVQPVDDEVPRLRLPPGTLGSYLDVLENGAAEITANVIQ
GTDEDTDDLMLTFIVEDPPQHGNILVQGVPAERFSQRDLLDGAVVYAHTGGEIGLLPKED
AFNLTLSDLSEEWSVRGSVVQGVSVLVTILPVDSQAPEIFAGEQFIVMEGDKRVITPAHL
RAEDVDTPNDDILCTIVAQPSSGYVENISPAPGSEKSRAGLAISAFTLKDLRQGHIFYVQ
SIHRGVEPVKDRFAFRCSDGINFSQRHFFPIVIIPINDEEPEIFMREFVVMEGMSLVIDT
PILNAADADIPPDELLFTITRLPRHGHIVNQLVNGTVLVESFTLDQITESSNILYEHDDS
ETKEDSFEVKLTDGKHTVRKTVLIMVVPVDDETPRMAINDGLEIEMGETRTIHNRILKAT
DLDSEDKTLTYIIRYGPAQGLLQRIKPSGGVENITLGMNFTQGEVDRNLIRYMHFGQQGV
RDLIKFDVTDGINPLIDRYFYVTIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSDLN
SPDENLVFTITRAPVRGHLECTDRPGVPISTFTQLLLAGNKVYYIHTSEDEVKMDSFEFE
VTDGYNPVFRTFRISISDVDNKKPVVTIHNLVVSENEYKLITPFELTAEDRDTPDALLKF
IITQVPVHGRIMFNSSKPVTTFTKQDLNENLISYKHDGTESVEDSFSFTVTDGTHTDFYV
FPNTVFETRKPQTMKIRIMAVDNSVPQIVINKGAQTLRILATGHIGFLITNKVLKVEDRD
SLHVTLKIRITEAPRHGFLIHLGKGNHSISHFTQADIDDMKICYVLRGGDNATSDIFHFM
VEDGGGNRLTNQHFRLNWAWISLEKEYYLVNEDSKYLDVVLKRRGYLGETSFISISTRDG
TAKKDKDFRGKAQKQVQFNPGQTLATWRVRILSDGEHEQSESFQIVLSEPVMAVLEFPDV
STVEIIDPGDESTVFIPQSTYTVEEDVGELFIPVRRSGDVSQELMVICYTHQGTASGTAP
TSVLSYSDYISRPEDHNSILRFDKDEREKMCRVVIIDDSLYEEAETFDVLLSMPMGGRIG
VEFPSTRITIVPDKDDEPSFYFGNDEYYVDESAGYVEVRVWRTGTDLSKAASVTVRSRKS
EPITAEAGVDYVGISRNLDFSPGVNVQTFRVVILDDLGQPVLEGTEKFELVLRMPMNAAL
GEPSKATIFINDSVTDLPKMQFKESVYVGNENDGQISAMIYRNGDIRYTSTVRCYTRQGS
AQVMMDFEERPNTDSSIITFLPGETEKPCTLVLMDDTFHEEEEELRLVLGTARSDSSFGA
SIGEQNETLIKIRDDADKAIIKFGETKFSVSEPKDTKQVALVKIPVLRLGDTSKVSVVRV
HTKDGSATSGEDYHPISEEIEFKEGETQHFVEIEILFDGVREMREAFTVHLRPDENMVAE
IQTAKAIVYIEEMNSMADVTFPSVPQVASLLIYDDTSRSKDRSSPIAGYPVICITACNPK
YEDFEKTGSICASENINNTLTRYRWLVSAPTGPDGVTSPMKEVDFDTFFTSSKMITLDSI
YFQAGSRVQCAARAVNSDGNEGLELMSPIVTISTSEGVCQPRMSGVVGAEPFSAKLRYTG
PEDPDYANLIKLTVTMPHIDGMLPVISTRELSNFELTLSPDGTRVGNHKCSNLLDYTEVK
THHGFLTDATKNPDVIGETIPYQYSPTIRGFNTLRFYRNLNLEACLWEFVSYYDMSELLT
DCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLQSELRLTFVYDTAI
LWKDGIGSPPEAELQGSLYPTSMRISEEGRLVVNFKTEARFHGLFVMSHPASSLTSMVMS
ADHPGLMFSLSLIRSEPTYNQPVQQWSFVSDFAVRDYSGMYTVKLIACTTTPYQEYSLPV
ICNPREPITFDLDIRFQQVSDPVAAEFSLNTQMFLLSKKTLWLSDGSMGFGQESDVAFSE
GDIIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYNPSNTEYGCLADSPSLLYRF
KIVDKAQPETQATSFGNVLFNAKLAIDDPEAIPLVKQPGSDGFKVDSTPLFQVSLGREWY
VHTIYTVRSKENANRGIGKRSVERQYHLLFSGGSPGESMQRRQKRGVEQSSELAKDIGVE
SKRGTNIQHIALDRTSKKQVPQREVVVNGVLPRELNSESVGVSVVTIIGGAAAILLAICL
IAIIILLLKRKQNSEKRKATKDPGSNEPMMLPYNYSSDSSEV
NT seq
9489 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgagcggctctccccgccgcgccgcggcggctgctggccggcttgctgctgctg
gccggctgcgcggggctcggcgagccgcagccgggcagcgccgccgcgtcctcgccgtgg
gagccggaggcggccgccgtcgtggtggccaaccgcgggctgcgggtgccgctggggcgc
tccgcctggctggaccccgcgagggacctggtgctgcgggtgcagccgggggaccgctgc
cacctcaccgtgctggacgaggacccgctgtggcagcggccgggccgcctgagcccccgg
cgcttcccctgcgacttcggcccccgcgaggtgcggtactggcacctgggcggccgcagc
cccgcccgcgaccgcgtgcgactgcagctgcgctacgactcggcgagccgcgcgctggtg
ctgccgctggcgctgcaggtggaggtgctgttcacgcagctggagatcgtcacccgcaac
ctgcccctcgtcgtggagcgcctgcggggcaccagcagcccgctggacgcgcgcagcctg
gagttcgccttcgagccgggccgacagcgctgccgcgtggggctgctgccgccgctggcc
gggctgccccgctacggggagatcgtggggatccccgcggcggcggcggcggcgggcggg
gaagcggcgggcggtgtcccgatgccagactccatgtgggactgcgaggagttcctgcgg
ctggggctgcgctaccggcacacggcggccggcgggtcccccaaccgcgacctggtgccg
ctggtggccgagctgcgggaggcggcgggcgccggggcgctgctgaagcgcgagtacttc
caggtgctggtgcggatccgggctgggagcgagaacgtggcccccaagcccagcttcttg
gccatgctcatgatggaggtggaccagttcgtcctcaccgccctcacgccggacatgctg
gcggctgaggatgccgagacgccgccagatctgctgctcttcaacatcacttcgcccttc
ggccctggccaggggcacatggtcagcacggatgaccggagcttgcccatctcctccttc
agccagcgggacgtgagggagctgcgcatcgcctaccagccacccgtggaggactccgat
cgggagcggctctttgagctcgagctggaagtgttggaccccgagggtgctgcctcagag
ccctttgcctttgtgattgtggtgaagcccatgaacaccctggcacccgttgtgactcgc
aacaccggcctcctgctctatgaggggcagtcacggcctctctcaggccccggtcccagc
cccaacctggtcatcagcgatgaggatgaccttgagcaggtgagggtgagtgtggtggca
gggctgaggcacggccaccttactctgctggacgacaccccagaacctgctgcccctcgt
aaacacttcacagtggccgagctggcggcaggccgggtcatctaccagcatgacggcagt
gagtctccgctcagtgacaatctggtgctgcgactggaagatggtggctcgcggcaccgt
gttgagttccttttccccattactgtggtgcccactgatgaccagccgcccctgctcaac
gctaacaccgggctggacatggctgagggtgaaacggtgcccatcaccacccgtgctctt
agcgccactgacatcgactcacaggatgccatcctgctcttcacagtagagtctggtccc
gctgctgggcggctcctgctccgtcaagtgcagccacctcctgactgggaagatgaggac
gaagatgagagcttttcttggaggagagtcgcaggttcagcagggagctctataatctat
gaaaagccagtgagagaatggctgcagcaggacattgtggaagggcgtctctactaccac
cactttgggcctcacagccctggccctgcggttgtgttggaccagtttgtctttagagtc
caggatgacaatgacccacccaaccgctccggaccacagactttcatgattcgagtacat
cccatagacagattagccccagagctacacagtagcagcagcctgcacttaatagttgca
gaacagcaagtaaccccactgcgaaggaagcacttgtgttacacagatcaggattcaggg
gaccgtgaactccgctacacaataacccagccccccactgacactgacagtaaccaccct
ccagatgtatacggagcccgccttggatccctcgtgctgactgaggatcactctgtggaa
gtcacgcacttcacccaagcccagatcaatcatcacaagatatcgtaccgtcccccacag
gaagaactgggagtggctcctcatttgattcaattccagtatcaagtgcaagacgcagct
ggcaatgctgctgaagggactttcaccatctatctgcagcctgtggataaccagcctcct
gaaatcactaatactggcttcaatttgcctgagggaggcagccatgtcctcagtccaaat
gagctggatgccagtgacacagacactgagcttgcccatctcaggtttatcctgacccag
cctcctcagtatggccagttgcagctttctgggtacagtttgattccaggaggtgtcttt
ggcctggaggatatcaggcaagggagagtggtgtatgtgcacagtggagctgagaccaac
agtgatacctgtgggcttgatgtgagtgatggcgttcattttgtgcctatcacactaaaa
atgaacgtgcaaccagttgatgatgaagtacctaggctacggttgcctccaggcactctt
ggttcctacttagatgttctggagaatggtgctgctgaaatcactgctaatgtcattcag
ggcacggatgaggatacagatgaccttatgttgaccttcattgtagaggatcctcctcag
catgggaacatcttggtccaaggggtgcctgcagagagattttctcagagagatttgctg
gatggtgctgtggtgtatgctcacactggtggtgaaataggccttctgcccaaagaggat
gccttcaaccttactttgtctgacctgtctgaggagtggagcgtcaggggcagtgttgtt
caaggagtttcagtcttggtgaccattcttcccgttgacagtcaagccccagagattttt
gcgggagagcagttcatagtaatggaaggtgacaaacgagtcattactcctgctcatctc
agggctgaagatgtggatactcctaatgatgatatattgtgcaccattgttgctcagccc
tcatctgggtatgtagaaaacatctctccagccccaggatctgaaaaatccagagcaggt
ctggctataagcgcttttactttgaaagaccttcgtcaagggcatatattttatgtccaa
agtatacatagaggtgtagagcctgtcaaagacagatttgctttccgctgttctgatggc
attaacttttcccaaaggcactttttccccattgtaattataccaatcaatgatgaagag
cctgaaatctttatgcgagagtttgttgtgatggaaggcatgagcttggttatcgatacc
cctatcctcaatgcagctgatgcggacatccctcctgatgagttattgttcacaattacg
agacttcccagacacggccacattgtgaatcagctggtcaacggaactgtcctagtggag
agcttcactttggatcagataacagagagctccaatatactctacgaacatgatgactct
gagacaaaagaggacagttttgaggtgaaactcacagatggtaaacatactgttaggaaa
acagtactcatcatggttgttcctgtagatgatgagacacccagaatggccatcaatgat
ggtttggagattgaaatgggggaaactagaactatccataacagaatattgaaggctact
gacctagattctgaagataaaaccttgacatacattataagatatggaccagcacaaggc
ctcctgcagagaataaaaccttcaggtggagttgagaatatcaccttggggatgaacttc
acccaaggtgaagtggatagaaacttaattcgatatatgcattttggccaacaaggagtt
cgtgatcttatcaaatttgatgtgacagatggaataaatcctctcattgaccgctacttt
tatgtgacaataggtagcattgatattgtcttcccagatgtaatcagcaaaggagtttct
ttgaaggagggagggaaggtaacccttactactgatttgcttagcacaagtgacctgaat
agtccagatgagaacttagttttcactattaccagagcaccagttcgtggtcatcttgaa
tgcacagatcggcctggtgtacccatctctacttttactcaactcctcttagcaggcaat
aaggtctactacattcacacttcagaagatgaggtgaaaatggacagctttgagtttgag
gtgactgacggctataaccctgtatttcgtactttccgaatttctatcagtgatgtggac
aataagaaacctgttgtcacaatccataacctggtggtgagtgaaaatgaatacaaactg
ataaccccatttgaactgactgcagaagacagagatacgcctgatgcattgctaaaattt
atcatcactcaagtacctgttcatggtcggatcatgttcaatagctccaaaccagtcacc
accttcactaaacaagatctaaatgaaaatctaatcagctacaaacacgatggcacagaa
tcagtggaggatagcttctcctttactgttacagatggcactcataccgatttctatgta
ttccccaacactgtgtttgaaacaaggaaaccccagactatgaagattcgaataatggct
gtggataacagtgtacctcagattgtgataaacaagggtgctcagactctccgcattctg
gccacgggtcacattgggtttctgattaccaacaaagtgcttaaagtggaagacagggac
agtttgcatgttactctcaagatcagaatcacagaggctccacgccatggcttcctgatc
cacctggggaaaggcaaccatagcatcagccacttcacccaagctgatattgatgatatg
aagatatgctatgttttacgagggggtgacaatgccaccagtgacatttttcatttcatg
gttgaagatggtggaggcaataggctgacgaatcaacattttcgcctaaactgggcatgg
atttccttagaaaaggagtattatttagtaaatgaagactccaaatatcttgatgttgtt
cttaaacggagaggttacctgggagaaacgtcttttataagtattagcaccagagatggt
actgccaagaaagataaagacttcagaggaaaagcccagaaacaggtgcagtttaatcct
ggccaaaccttagctacatggcgagtacggattttgagtgatggtgaacatgaacagtct
gaatcctttcaaattgttctttctgagcctgtcatggctgttctggaatttcctgatgta
tctacagtggaaattattgacccaggagatgaatcaactgtctttattcctcagtccacc
tatactgttgaagaagatgttggtgaattatttattccagtcagaagaagtggagatgtg
agccaggaactgatggttatctgttacacacatcaaggaacagcatctggcactgctcca
acttctgtactctcttactctgactacatatccaggcctgaggatcataacagtattcta
cgttttgacaaagatgaacgagaaaaaatgtgtcgggttgtcatcatagatgattccttg
tatgaagaggccgagacctttgacgttttgctaagtatgccgatgggtggaagaattggt
gtagaattcccaagcactcgaattaccattgtacctgacaaggatgatgaaccatcgttc
tactttggaaatgatgaatactatgttgacgagagtgctgggtatgttgaggtacgtgtc
tggaggactggaactgacctgtctaaagctgcctctgtgacagtgaggtctcgcaaatct
gagccaataactgcagaagctggagtagattatgtaggcatcagtcgtaatttggatttt
tcccctggagtcaatgtgcagacatttcgtgtggtaattcttgatgaccttggacagcca
gttttagaaggaactgagaagtttgagctggtgctaaggatgccaatgaatgccgccctt
ggagaacccagcaaggccaccatcttcattaatgactcagtgactgacttgcctaagatg
caattcaaagaatctgtgtatgtaggcaatgaaaatgatggacagatttctgccatgata
tacaggaatggagatatccgatacacatccactgtgagatgctatacacggcaaggttca
gctcaggtgatgatggactttgaagagcgtcctaatactgacagttccatcatcacattc
cttcctggtgaaactgagaagccttgcacgctggtgcttatggatgatactttccatgaa
gaagaggaagaactacgactggttcttggcactgcaagaagtgattcttcctttggcgcc
tctattggcgaacaaaatgagaccctgataaagattcgggatgatgcagacaaggctatt
attaagtttggtgagaccaaatttagtgtgagtgaaccaaaggacacaaagcaagtagca
ttagtaaaaatcccagtgcttcgcctgggagacacttccaaggtttctgttgtgagagtt
catacaaaggatggatctgctacttctggagaagactatcaccctatatcagaagaaatt
gagtttaaggagggcgaaacacagcactttgtggagattgaaatcctctttgatggagta
agggagatgagagaagccttcactgttcacctgaggcccgatgagaacatggtcgcagaa
atacagacagccaaggccattgtttacattgaggaaatgaacagcatggcagatgtcacc
tttccctctgtccctcaagttgcatccctgttgatatatgatgatacttctagatccaaa
gacagaagcagtcccatagctggctatcctgtcatctgtatcacagcttgcaatcctaaa
tacgaagattttgagaaaactggttcgatatgtgccagtgagaacatcaataatactctg
acaagataccgatggcttgtgagtgcccctactggtcctgatggtgtgactagccccatg
aaggaggttgactttgataccttcttcacttcttccaagatgattacacttgactccatt
tactttcaagctggttctcgtgtccagtgtgcagctcgtgcagtgaattcagatgggaat
gagggtcttgagcttatgagccctattgtaactataagcacatcagaaggtgtttgtcaa
cctcgtatgtcaggggtagttggagcagaaccattctctgccaaattgcgctatactgga
ccagaagatcctgattatgccaatctcatcaaattgacagtcacaatgccacatattgat
ggcatgctgcctgttatttctacaagagagctttccaactttgagctgacacttagccct
gacggaactagagttggaaaccataaatgctccaacctattggattacacagaagtgaag
acccaccatggtttcttgactgatgctaccaaaaatccagatgtgattggagagaccatt
ccttatcaatacagcccaacaattagaggcttcaatactttacgcttctaccgcaatctg
aatcttgaagcctgtctatgggagtttgttagctattatgacatgtctgaactcctcaca
gactgtggaggcaccattgggacagatggacaggttctcaacttagtacagtcctatgtc
acgctgagagtccctttgtatgtctcttacgttttccactctccagtgggtgtaggaggg
tggcagcatttcgacctacaatcagagctccgtctgacttttgtgtatgacactgccatc
ctgtggaaggatgggatcggtagcccgcctgaagcagagcttcaaggttccctgtaccca
accagcatgcgtattagtgaagaggggcgcttggttgtcaacttcaagactgaagctcgg
tttcatggtctgtttgtgatgtcccatcctgcttcatctctaacttccatggttatgtca
gctgatcacccaggcctgatgtttagcctcagcctcatccgaagtgagccaacgtacaac
cagccagtacagcagtggagctttgtttcagattttgcggttcgagactattctggaatg
tacactgtgaagctgatagcttgtaccaccactccatatcaggagtacagcctaccagtg
atctgcaatcctagagagccaatcacatttgatctggatatccgatttcagcaggtcagc
gacccagtggctgctgagttcagcttgaatacccagatgttcctcctctccaaaaagaca
ctgtggctatctgatggctcaatgggctttgggcaagaaagtgatgttgctttctcagaa
ggtgatataatatatggtcgggtgatggtggatccagtgcagaatttgggtgattccttc
tactgtagcatcgagaaggtcttcctatgcacaggtgctgatggatatgtaccgaaatat
aatccatccaacactgaatatgggtgccttgctgattctccatcccttctgtacaggttt
aagattgtggacaaagctcaaccagaaactcaagccacaagctttggaaatgtgcttttt
aatgcaaaacttgcaatagatgatcctgaagcaattccactagttaaacagccaggctct
gatggatttaaagtagattcaactcctttatttcaggtgtctttgggtagggagtggtat
gtccatacaatctacactgtacgttcaaaagagaatgctaaccgcggaatcggcaaaaga
agtgtggagcgccaataccacttgcttttcagtggtgggagcccaggagaatccatgcaa
agacgtcagaagaggggagttgagcagtcctcagagcttgcaaaggatattggagtagaa
agcaaacgaggaacaaacatacagcacatagcactagatcgcaccagcaagaaacaggtt
cctcaaagggaggttgtggtcaatggggttctccccagggaactgaatagcgaaagtgta
ggggtcagcgtagtcacaatcattggtggagctgctgccattctccttgccatctgctta
attgcaatcatcattttgctgctaaaaaggaaacaaaattctgagaagaggaaagccaca
aaggatccaggcagcaatgaaccaatgatgctaccatataattacagcagtgacagctca
gaggtttga
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integrated database retrieval system
