Cuculus canorus (common cuckoo): 104066199
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Entry
104066199 CDS
T08597
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104066199 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cuca01002
]
104066199 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104066199 (TAF2)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104066199 (TAF2)
Peptidases and inhibitors [BR:
cuca01002
]
Metallo peptidases
Family M1
104066199 (TAF2)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104066199 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
104066199 (TAF2)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104066199 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1_N
Peptidase_M1
SR-25
Motif
Other DBs
NCBI-GeneID:
104066199
NCBI-ProteinID:
XP_053914114
LinkDB
All DBs
Position
2:15255571..15316607
Genome browser
AA seq
1200 aa
AA seq
DB search
MNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGYVELTIFPTVANLNRIKLNSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKV
PSELWKHVDELKVLKVHINFSLDQPKGGLHFVVPNMEGSMAERGAHVFSCGYQNSTRFWF
PCVDSYSELCTWKLEYTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFID
EAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKQELDQIVAYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALE
KFPTPASRLALTDILEQEQCFYRVRMMACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCK
TCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLMFILDLIKYNDNRKNKFS
DNYYRAELIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTI
TVSCLKAIRVLQKNGHVPSDPSLFKSYAEYGHFIDVRIAALEAVVDYTKVDRSYEELQWL
LTMVQNDPVPYIRHKILDMLTKNPPFTKNMDSPLCNEALVDQLWKLMNSGTSHDWRLRCG
AVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVANNQEPVNSTNNHGQL
VGFQNTEDDQLIKETASSISGHQQGVKRKADMPLGSPLEPGQILEKNEDSKVKLKIRFSN
SQEEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSSGEVNMHPVSAAPLSVFSKESNS
SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKEKDPFAFSNSPASARSIRSPSLSD
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaaaggagacaagggatttgagagcccaagaccatataaattaactcac
caggtagtttgtatcaacaacataaattttcagagaaagtctgttgtaggttatgtggaa
ctgaccatatttcccacagttgcaaacctgaatagaatcaaactgaacagtaaacaatgt
cggatttacagagtaagagtcaacgatttagaagcagctttcatctataatgatccaacg
ctggaggtttgtcaccatgagtcaaagcagaggaatctcaactatttttccaatgcctat
gctgctgcagtcagtgctgtggacccagatgctggaaatggagagctctgcattaaggtt
ccgtcggagctgtggaaacatgttgatgaattgaaagtcctgaaggtgcatataaacttt
tctctggaccaacctaaaggaggccttcattttgtggtacccaacatggagggcagcatg
gcagaaagaggggctcatgtcttttcatgtggttatcaaaattctacaagattttggttt
ccttgtgttgattcatattccgagttgtgtacttggaaacttgaatatactgtagatgct
gcaatggtggccgtttcaaatggagatttggtggaaactgtttatacccatgatatgaga
aagaagacttttcattacatgctgactattccaactgcggcttctaacatctccttggcg
ataggaccttttgaaatccttgttgatccatacatgcatgaggtgactcacttttgctta
ccacaacttctcccattgctcaaacataccacatcataccttcatgaggtgtttgaattt
tatgaggagattcttacctgccgctatccatactcctgtttcaagactgtatttatagat
gaagcttatgttgaagtagctgcttatgcatccatgagtattttcagcacaaatctctta
catagcgcaatgattatagatgaaactccactgacacgaaggtgcttagcacaggccctg
gcccagcagttctttggatgttttatatctagaatgtcctggtcagatgaatgggtacta
aagggaatctctggttatatttatggcctttggatgaaaaaaacctttggtgttaatgag
tatcgccactggattaaacaggagctagatcaaatagtggcgtatgaactgaagactggt
ggagttttactgcatccaatattcggaggaggaaaagagaaagacaaccctgcatcccat
ttacatttttctatcaagcatcctcatacactgtcctgggaatattacactatgttccag
tgtaaagcacatcttgttatgagactgattgagaacagaattagcatggagttcatgtta
caggttttcaacaagttgttgagtctggccagcactgcttcatctcagaagttccagtca
cacatgtggagtcagatgttggtttccacatctgggtttttgaaatctatctcaaatgtc
tctggcaaagacatccaacctttaataaagcagtgggtggatcagagtggagtggtaaaa
ttttatggtagctttgcatttaatagaaaacgtaatgtattggaattggaaataaaacaa
gactacacatctcccgggactcagaaatatgtgggtcctcttaaagtgacagtgcaagaa
cttgatggatcattcaaccatacattgcagattgaagaaaacagtcttaaacatgatata
ccttgccattctaaaagcagaagaaataagaagaagaagattccactgatgaatggggaa
gaggtggacatggatctttctgctatggatgctgattcccctttgctctggataagaata
gaccctgatatgtcagtactgaggaaggtagaatttgaacaatctgatttcatgtggcag
tatcagcttcgatatgagagagatgtggttgcacaagaagaagccattctggcactggaa
aagttccccactccagcatcacggcttgcactgactgatatactagaacaggagcaatgt
ttctaccgtgtgagaatgatggcctgcttctgccttgcaaagattgcaaattccatggta
agtacatggacaggaccaccagccatgaaatcactctttacccgaatgttttgttgtaag
acttgtccaaacattgtgaagaccaacaacttcatgaactttcaaagctactttctgcaa
aagactatgcctgttgccatggcccttctgagagacgttcacaacctctgtcctaaggag
gttttaatgtttattttggatttgatcaagtataatgataacaggaagaataagttttca
gacaactactatcgtgctgagctgattgatgccctagccaactctgtaactcctgcagtc
agtgtgaacaatgaagttcgaacactggataacttaaatcctgatgttcggcttattctt
gaggaaattacccgcttcctaaatatggagaagttacttcctagttacagacataccatt
acagtcagctgtttaaaagccattcgagtgcttcagaagaacggtcatgtcccaagtgat
ccctctctcttcaagtcatatgcagaatatgggcacttcatagatgtccgaatagcagca
ttggaggctgtagttgactacacaaaagttgataggagctatgaagagctacagtggctg
cttactatggttcagaatgatcccgtaccctacataagacataagattctggatatgctg
actaagaatccaccttttaccaagaacatggattcccctttatgcaatgaagctttggta
gatcagctttggaaactgatgaattcaggaacttcacatgactggagattacgttgtggt
gctgtggacctctatttcacactttttggcctcagcagaccttcttgtttaccattgcca
gagcttggacttgttcttaatctgaaggagaagaaggctgtacttaatccaacgattatc
cctgaatcagttgcaaataatcaggaacctgtaaatagtactaacaatcacggacagtta
gtaggatttcagaacaccgaggatgatcaacttattaaggaaacagcatccagcatttct
ggtcatcagcagggggtgaagaggaaagctgatatgccactcgggtctccattggagcca
gggcaaatactagagaagaatgaagacagtaaagtcaaactcaaaatcagattctcaaac
tcccaagaagaggaggaaattgatatggacacagttcatgacagtcaagcctttatttac
catcatttgaatatgttggagagaccatccacaccaggtaaagagcaatcttcgggagag
gtgaacatgcaccctgtgtcagcagctccactgtctgtctttagtaaagaatcaaactcc
tcaaaacatagtgatcaccatcaccatcaccaccacgagcacaagaaaaagaagaagaaa
cacaagcataagcataagcataaacataaacatgacagtaaagaaaaggaaaaggatccc
tttgctttctctaacagtccagccagtgcacgatcaattcgttccccgtcactttcagac
tga
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integrated database retrieval system
