Cuculus canorus (common cuckoo): 104066204
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Entry
104066204 CDS
T08597
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104066204 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104066204
NCBI-ProteinID:
XP_009567073
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Position
2:14836414..14946322
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AA seq
507 aa
AA seq
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MAVAAGGRARRSGWLEVLVRERWHKVLADLGAEALVLSGEERPDGPGGDGAAGRGAEAAA
RTAFTDPPEQVPEAVSNKKRCVKVLKQEQGGLGISIKGGKENKMPILISKIFKGLAADQT
QALYVGDAILAVNGTDLRDATHDEAVQALKRAGKEVLLEVKYMREATPYVKKGSPVSEIG
WETPPPESPRLGCTSADPLSQLSLSIHRDKKTIPLKMCYVTRNMTVSDPENRLIEVHSPD
AKHTVVLRSKDSATAQAWFNAIHSSVNELIPRVIAEVRDQLGKTGIAGSREIRHLGWLAE
KVPGDNEKHWKPVLVVLTEKDLLIYESMPRMKEAWFSPLHTYPLLATRLVHSGPGKGSPQ
LGLDLSFATRTGTRQGIETHLFRTETSRDLSLWTRSIVQGCHNSAELITEITTSCTYKNQ
ECRLTIHYEHGFSLTTELQDGAFSKTIAQYPYEKLKMSSDDGIRMLYLDFGGKDGEIQLD
LHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcgggcggccgggcgcggcgcagcggctggctggaagttttggtgcgg
gagcgctggcacaaagtgctcgccgacttgggcgccgaggcgctggtgctgagcggcgag
gagcgccccgacgggccgggcggcgatggggcggcgggccggggcgccgaggcggcggcg
cgcaccgccttcaccgacccccccgagcaggtgcccgaggccgtgtccaacaagaagcgg
tgcgtgaaggtgctgaagcaggagcagggcgggctgggcatcagcatcaaggggggcaaa
gagaacaagatgcccatcctcatcagtaagatcttcaaggggctggcggcggaccagacc
caggcgctctacgtgggcgatgccatcctggccgtcaacggcaccgacctgcgggacgcg
acccacgacgaggcggtgcaggcgctcaagcgcgccgggaaggaggtgctgctggaagtg
aaatacatgagagaagcaactccctatgtgaagaaaggctctcctgtttcagaaattggg
tgggagacacctccccctgaatctcctcgcttgggttgcacctctgctgaccccctctcg
cagctttcactctccatccacagagacaagaagacaataccgctcaagatgtgctacgtg
acgcgcaacatgacagtgtcagaccctgaaaacagacttattgaagttcattcacctgat
gccaagcacaccgtggtgctcaggagtaaggattcagctacagcccaagcctggttcaat
gccatccactccagtgtcaatgaactcatccccagggtgattgcagaggtcagagaccag
ctgggtaaaacagggattgctggaagtcgagagattaggcatctaggctggcttgcagaa
aaggtgccaggagacaacgagaaacactggaagccagtgttagtggtcttgacagagaaa
gacctcttaatatacgagagcatgccgcgaatgaaggaagcgtggttcagtcctctgcat
acctaccccctgctagccaccaggttggtccattctggcccaggaaagggctcaccccag
ttgggcctggatttgtctttcgcaacccgtactggtacaaggcaagggattgaaacccat
ctgttcaggacagagactagcagagacctctcactgtggacgaggagcatcgtgcagggc
tgccacaattctgcggagctcatcacagaaatcaccacatcttgcacatataaaaaccag
gagtgccgtttgaccatccattatgaacatggattctctcttacaactgaactgcaagat
ggtgccttctctaagacaattgcacaatatccctatgaaaaactgaaaatgtcctcagat
gatgggataaggatgctttatttagactttggaggaaaggatggagaaatacaactggac
cttcattcctgtccaaagccaattgtgttcatcattcattccttcctgtcggccaagatt
acaaggcttggcttggtggcataa
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