Cuculus canorus (common cuckoo): 104066255
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Entry
104066255 CDS
T08597
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104066255
Transcription factors [BR:
cuca03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104066255
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Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104066255
NCBI-ProteinID:
XP_009567128
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Position
10:complement(11132467..11134798)
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AA seq
414 aa
AA seq
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MPPGLVRASLGAARGTRSAPLSRRARSSTTSGSGASAHRAEKLPPAAAAKAGSFLSFLFL
FFVCLFGFVFFLFLTSFPRAGACLPAALAHLLPAPAMYSMLETEIKTPQPTPGSAGGTPA
PGSNGKGAGGGGAGGGAGAGSDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL
GADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGNLLAPG
GGNAVSSPVGVGQRIDTYAHMNGWTNGAYSLMQDQLGYSQHPGMNSPQLQQMHRYDMTGL
QYSPMMSTAQTYMNAASTYSMSPAAYGQQPSTAMSLGSMGSVVKSEPSSPPPAITSHSQR
ACLGDLRDMISMYLPPGGDATDPSSLQGSRLHSVHQHYQSAGTGVNGTVPLTHI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgggattggtgcgcgcatcgctcggcgctgcccgcgggacgcgctccgcaccg
ctcagcaggcgcgcccgcagcagcaccacctcggggagcggcgcatccgcccatcgggca
gaaaaacttcctcctgcagcagctgccaaggccggttctttcctctcctttttatttctt
tttttcgtttgtttgtttggttttgttttctttttgtttttaacttcctttccccgcgct
ggtgcctgcctgcccgccgccctggcgcacctcttgccggctccggccatgtacagcatg
ctggagactgagatcaagacgccgcagcccacgccaggcagcgccgggggcacccccgct
cccgggagcaacgggaaaggcgcgggaggcggcggagccggtggcggggcgggagccggc
tcggaccaggaccgggtgaagcgccccatgaacgccttcatggtgtggtcgcggggccag
cggcggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctc
ggggccgactggaagctgctgagcgatgccgagaagcgacctttcatcgacgaggccaag
cgcctgcgggccgtgcacatgaaggagtatccggattacaaataccggccccgaaggaag
accaagaccttgttgaagaaggacaaatactcgctacccggcaatctgctggccccggga
gggggcaacgcggtaagcagccctgtcggggtcggccagaggattgacacttacgcgcac
atgaacggttggaccaacggggcttactcgctgatgcaagaccagctcggctacagccag
cacccgggcatgaacagcccgcagctgcagcagatgcaccgctacgacatgacggggctg
cagtacagccccatgatgtccacggcccagacctacatgaacgccgcctccacctacagc
atgtcccccgccgcctacggccagcagccctccacggccatgagcctgggctccatgggc
tcggtggtgaaatccgagcccagctcgccgcctccggccatcacctcccactcgcagagg
gcctgcctgggagacctgcgggatatgatcagcatgtacctacccccggggggggatgcc
acagacccttcctccctgcagggcagcaggttacacagcgtccaccagcactaccagagt
gccgggactggcgtgaatggtaccgtaccactaactcacatataa
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