KEGG   Cuculus canorus (common cuckoo): 104066255
Entry
104066255         CDS       T08597                                 
Name
(RefSeq) transcription factor SOX-3
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
cuca  Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cuca03000]
    104066255
Transcription factors [BR:cuca03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    104066255
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 104066255
NCBI-ProteinID: XP_009567128
LinkDB
Position
10:complement(11132467..11134798)
AA seq 414 aa
MPPGLVRASLGAARGTRSAPLSRRARSSTTSGSGASAHRAEKLPPAAAAKAGSFLSFLFL
FFVCLFGFVFFLFLTSFPRAGACLPAALAHLLPAPAMYSMLETEIKTPQPTPGSAGGTPA
PGSNGKGAGGGGAGGGAGAGSDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL
GADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGNLLAPG
GGNAVSSPVGVGQRIDTYAHMNGWTNGAYSLMQDQLGYSQHPGMNSPQLQQMHRYDMTGL
QYSPMMSTAQTYMNAASTYSMSPAAYGQQPSTAMSLGSMGSVVKSEPSSPPPAITSHSQR
ACLGDLRDMISMYLPPGGDATDPSSLQGSRLHSVHQHYQSAGTGVNGTVPLTHI
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgcccccgggattggtgcgcgcatcgctcggcgctgcccgcgggacgcgctccgcaccg
ctcagcaggcgcgcccgcagcagcaccacctcggggagcggcgcatccgcccatcgggca
gaaaaacttcctcctgcagcagctgccaaggccggttctttcctctcctttttatttctt
tttttcgtttgtttgtttggttttgttttctttttgtttttaacttcctttccccgcgct
ggtgcctgcctgcccgccgccctggcgcacctcttgccggctccggccatgtacagcatg
ctggagactgagatcaagacgccgcagcccacgccaggcagcgccgggggcacccccgct
cccgggagcaacgggaaaggcgcgggaggcggcggagccggtggcggggcgggagccggc
tcggaccaggaccgggtgaagcgccccatgaacgccttcatggtgtggtcgcggggccag
cggcggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctc
ggggccgactggaagctgctgagcgatgccgagaagcgacctttcatcgacgaggccaag
cgcctgcgggccgtgcacatgaaggagtatccggattacaaataccggccccgaaggaag
accaagaccttgttgaagaaggacaaatactcgctacccggcaatctgctggccccggga
gggggcaacgcggtaagcagccctgtcggggtcggccagaggattgacacttacgcgcac
atgaacggttggaccaacggggcttactcgctgatgcaagaccagctcggctacagccag
cacccgggcatgaacagcccgcagctgcagcagatgcaccgctacgacatgacggggctg
cagtacagccccatgatgtccacggcccagacctacatgaacgccgcctccacctacagc
atgtcccccgccgcctacggccagcagccctccacggccatgagcctgggctccatgggc
tcggtggtgaaatccgagcccagctcgccgcctccggccatcacctcccactcgcagagg
gcctgcctgggagacctgcgggatatgatcagcatgtacctacccccggggggggatgcc
acagacccttcctccctgcagggcagcaggttacacagcgtccaccagcactaccagagt
gccgggactggcgtgaatggtaccgtaccactaactcacatataa

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