Cuculus canorus (common cuckoo): 104066267
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Entry
104066267 CDS
T08597
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104066267 (LINGO1)
Membrane trafficking [BR:
cuca04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
104066267 (LINGO1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
V-set
LRRNT
Motif
Other DBs
NCBI-GeneID:
104066267
NCBI-ProteinID:
XP_053933661
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All DBs
Position
12:17801560..17969593
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AA seq
619 aa
AA seq
DB search
MQVRDRMVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKR
FMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNL
RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY
ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRL
KVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVT
IEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNL
ETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTC
RRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGT
LEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDA
NSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRK
SDAGISSADAPRKFNMKMI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagagataggatggtagctggggaggcgagtatgcgcagcccaatcctggcc
tgctggcagccgattctcctcctgatgctgggttccatcctgtctggctccgccacaggc
tgcccaccacgctgcgaatgctctgcccaggagcgtgccgtcctgtgccaccggaagcga
ttcatggtcgtgccagaggggatcccgactgagaccaggctgctggacttgggcaagaat
cgcatcaagacactcaaccaggatgaatttgccaactaccctcacctggaggagctggag
ctaaatgagaacattatcagtgccattgaacctggggctttcaacaacctcttcaacctc
aggacgctggggctcaggagtaacagactcaagctgatccctttgggggtatttaccgga
ctcagcaaccttaccaagctagacattagtgagaacaaaattgtgatcctcctagactac
atgttccaggacttgtacaacctgaagtctttggaggtgggggacaacgaccttgtctat
atctcccaccgggccttcagcggcctcaacagcctggagcagctgaccctggagaaatgc
aacctgacctccatccccacagaggccctgtctcaccttcatggcttgatcgtgctgcgg
ctgcgccatctgaacatcaacacaatccgggattactcattcaagaggctgtaccggctc
aaagtccttgagatctcacattggccctacctggatactatgacatccaactgcctctac
gggttgaacctgacctccttgtccatcacccactgcaacctgacatccatcccatatgtg
tcagtgaggcacttggtttacctccgattcctgaacctgtcctacaacccaattgtcacc
atcgagggctccatgctccatgatctgctcaggctgcaggagatccagctggtgggaggg
cagctcaccacggtcgagcccttcgccttccgtggcctcaattacctgcgcatcctgaac
gtgtcagggaatttactcaccaccctggaggaatcggccttccattcggtgggcaacctg
gagacactcatccttgacaacaaccccttagcctgcgactgtcggctgctctgggttttc
cgtcggcgatggaggttgaatttcaacaagcagcagcctacctgctccacccctgaattc
gtccagggcaaggaattcaaagatttccccgatgtcctcctacccaactacttcacctgc
cgccgagcacggatacgggaccgcaaacctcagcagatttttgtggatgaaggccacacg
gtccattttgtctgccgggcagatggggatccgccccccaccatcatgtggctctctccg
cggaagcacctcatctctaccaaaaccaacgggcggctcactgtcttccctgacggcacg
ctggaggtgcgctacgcccagatccaggacaatggcacctacctatgcatcgccagcaac
gcgggtggcaacgacaccatgctggcccacctgcacgtgcgcagctactccccggactgg
ccccaccagcccaacaagactttcgcgttcatctccaaccagcccaacgagagcgatgcc
aacagcacgcgcgccaccgtgcctttcccctttgacatcaagactctcatcattgccacc
accatgggcttcatttccttcctgggcgtcgtgctcttctgtctggtgctcctcttcctg
tggagccgggggaaaggcaacaccaagcacaacattgaaatcgagtacgtgccacgcaag
tccgatgcgggcatcagctctgccgacgcaccgcgcaagttcaacatgaaaatgatttaa
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