Cuculus canorus (common cuckoo): 104066287
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Entry
104066287 CDS
T08597
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04350
TGF-beta signaling pathway
cuca04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104066287 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104066287 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104066287 (NEO1)
Cell adhesion molecules [BR:
cuca04515
]
Immunoglobulin superfamily
DCC/UNC5 family
104066287 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
SusE
TMEM154
TM_ErbB1
Herpes_UL74
EphA2_TM
Neur_chan_memb
FAM176
Motif
Other DBs
NCBI-GeneID:
104066287
NCBI-ProteinID:
XP_053933983
LinkDB
All DBs
Position
12:16587941..16763074
Genome browser
AA seq
1469 aa
AA seq
DB search
MAPGRARRLLGSLCIALLLGQPAPAAARSGSHGLAESLVRTFTPFYFLVEPMDVLSVRGA
AVIMNCSAYCETAPKIEWKKDGTFLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEGYYQ
CVATVESLGTIVSRTAKLTVAGLPRFTSQPEPSSVSKGNSAVLNCEVNVDLAPFVRWEQD
RQPVFLDDRVFKLPSGALIISNATDEDRGLYRCVIESGGTPKYSDEAELKILPDPEEAQS
LMFVRQPSSLTRVTGQSAVFPCVAVGFPAPYIRWTRNEEELIADSSERFLLLAGGSLEIR
DVMEEDAGTYTCIAGSGNETIEAQAELTVQVPPEFLKRPANIYAHESMDIVFECEVIGKP
TPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLIIL
DLDVAIPTLPPTSLTSATNDHLAPATTGPLPSAPRDVVATLVSTRFIRLTWRTPVSDPQG
DNLTYSIFYTKEGINRERVENTSRPGETQVTIQNLMPETVYVFRVVAQNKHGPGESSVPL
KVATQPEVQLPGPAPNIRAYASSPTSVSVTWETPLSGNGEIQNYKLYYMEKGQDTEQDVD
VAGLSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVVVRTLSDVPSAPPQNLTLEVRNSK
SIMLHWQPPPAETQSGQITGYKIRYRKVSRKSDVTESIGGTQLFQLIEGLERGTEYSFRV
AALTVNGTGPATDWVSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVR
GYAIGYGVGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRP
HSDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKITDAR
YYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTT
FELVPTSPPKDVTVVSKEGKPRTIIINWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEP
VVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQASGSA
GKGSRPVDIGPDYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVFCTR
RTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTP
IPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPV
ISAHPIHSLDNPHHHFHSGSLASPTRSYLHHQVSPWPIGTSMSHSDRANSTESVRNTPST
DTMPASSAQACADHQDPESATGSYLANAQEEDSAQNLPTAHVRPSHPLKSFAVPAVPPAG
ASYDPALPSTPLLTQQAPNHPVHSVKTASIGTLGRTRPPMPVVVPSAPDVQETTRMLEDS
ESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgggcagagcccgccggctgctcggctccctctgcatcgcgctgctcctcggg
cagcccgcgcccgccgccgcccgcagcggctcccacggcctcgcagaatcccttgtgaga
accttcactcctttttactttctggtggagcccatggacgtcctgtcagttcgtggggct
gctgttatcatgaactgctccgcttattgtgagactgctccgaaaattgaatggaagaaa
gatgggacttttctcaacctggtgtcggatgaccgccgccagttgctaccagatggatct
ttattaataaacagtgtggtgcattccaagcataataaacctgatgaaggatattatcag
tgtgtggcgactgtggagagcctggggactattgtcagcagaacagcaaagctcaccgta
gcaggcctccccaggttcaccagtcagcccgaaccgtcatctgtctctaaaggaaacagt
gcagtccttaactgtgaagtcaatgtggaccttgcgccatttgtgaggtgggagcaggat
cgccagccagtctttctggacgaccgggtgtttaaactgccaagcggagctctgatcatt
agcaacgctactgatgaggacagaggactctaccgctgcgtcattgaaagtggtgggacc
cccaaatacagtgacgaagcagagctcaaaattcttccagatcctgaggaggcacagagc
ctgatgtttgtgcggcagccgtcttcacttaccagagtcacaggacagagtgcggtcttc
ccatgtgttgccgtaggatttccagctccgtatatcaggtggacaagaaatgaagaggag
cttatcgcagacagctctgaaaggtttcttctgcttgcgggaggcagtctggagatcagg
gatgtgatggaagaggatgcggggacatatacctgcatcgcgggcagtggaaatgagacg
attgaggctcaggcagaacttacagttcaagttcctcctgaatttctgaagcggccggca
aacatttatgctcatgaatcgatggacattgtgtttgaatgcgaagtgattggaaaacca
actccaacggtgaaatgggtcaagaatggagacatggtgatccccagtgactatttcaaa
attgttaaagaacataatctgcaagttttgggtctggtgaaatcagatgaaggattctat
cagtgcattgcagaaaatgatgttggaaacgcacaagctggagcccagctgataatactt
gaccttgatgttgccatcccaacattacctcccacttcactgaccagtgccactaatgac
catctagcaccagctacaacaggaccgttgccttcagccccgcgggacgttgtggccacc
ctcgtctccactcgcttcatccgactgacatggcggacgcctgtatcggaccctcaaggg
gacaacctcacctattcaatcttctacaccaaggaaggtataaacagggaacgtgtggaa
aacacaagtcgtcccggagagacacaagtgacaatccaaaacctgatgcctgaaacagtt
tatgtcttcagagttgtggctcagaacaagcatggccccggagagagctcggtcccgctg
aaggtggcgactcagcctgaggttcagcttcctggcccagcacccaacatccgagcgtac
gccagctcacccacctctgtcagtgtcacctgggaaacgcccttgtctggcaatggagaa
atccagaactacaagctgtattacatggagaagggacaggacactgaacaggatgttgat
gtagcagggctctcctacaccattaacggattaaagaagtacacagaatacagtttccga
gtggtggcttacaataaacatggccctggagtctcgacccaagacgtggtggtacgaacg
ctgtcagatgtccccagtgctccaccacagaatctgacgctggaggtgcggaactccaag
agcataatgctgcactggcagccacctcctgcagagactcagagtgggcaaatcactggc
tacaaaatccgataccggaaggtgtcgcgcaagagtgatgtaactgagagcattggtggg
acccagctttttcagctaattgaaggtctggagcgaggtacagaatacagctttcgcgtc
gctgccctgactgtgaacggcactgggccagctaccgactgggtgtcagcagaaacattt
gagagcgatctggatgaaacgcgggttcctgaagttccgagttccttacatgtccgcccg
ctcgtcaccagtattgtcgtgagctggactccccccgagaaccagaacatcgtggtgagg
ggctacgccatcgggtacggggtgggcagccctcacgcgcagaccatcaaggtggactat
aaacagcggtactacaccattgaaaacctagacccgagctcccactatgtcataactctg
aaagcgttcaacaacgttggggaaggaatccctctctacgagagtgccgtgaccaggcca
cactcagacacttccgaagttgatttgtttgttattaatgctccatacactccagtgcca
gatccgtctcccatgatgcccccggtgggagttcaggcttccattctgagccatgacacc
atacggatcacttgggcagacaactctctgccgaagaaccagaagatcacggatgctcgc
tactacacggttcgctggaaaaccaatatccctgccaatacaaagtacaagaccgcaaat
gcaaccactctgagctatttagtgacggggttaaaaccgaataccttgtatgaattctct
gtgatggtgactaaaggtcgaaggtcaagtacttggagcatgacagcacatggaacgact
tttgaattagttcctacttctccacccaaagacgtgactgtggtgagcaaagagggaaaa
cctcggacaataatcattaactggcagcctccgtctgaagccaatggcaaaattacaggg
tacatcatttactacagcacggatgtgaatgccgaaatacatgactgggttattgaacct
gtggtgggaaacaggctgacccatcagatacaagaactgacccttgatacgccgtattat
ttcaaaatccaggcccgcaactcgaagggcatggggccgatgtctgaggctgtccagttc
agaacccccaaagctgaatcctcagataaaatgcctaatgatcaagcttcaggatctgca
gggaaaggcagccgcccggtggacataggaccagattacaaaccaccgcttggtggcagt
aacagtccccatggaagccctacttctcccttggacagcaacatgctccttgtaatcatc
gtctccgttggagtgatcaccattgtcatagtggtgatagtcgctgtcttctgcactcgc
cgtacgacttctcaccaaaaaaagaaacgagctgcctgcaaatcagtgaacgggtcccat
aagtacaaaggcaactccaaagatgtcaagcctccggacctctggatccatcacgaaagg
ctggagctaaaacctattgataaatctccagatcccaatccaatcatgacagatacccca
atccctcgcaactcccaagacatcaccccagttgataattccatggacagcaatatccat
caaaggcggaattcctatagagggcatgagtcggaggatagcatgtccacactggcagga
agaagggggatgaggcccaagatgatgatgcctttcgattctcagccaccccagcctgtg
attagtgctcatcccatccattcactcgataaccctcaccatcatttccactccggcagc
ctcgcttctccaactcgcagctatctccatcaccaggtcagcccgtggccgattggcaca
tccatgtcccattcagacagggccaattccacagaatctgttcggaacacacccagcaca
gataccatgccggcatcctcggctcaggcgtgtgctgaccaccaggatcctgaaagcgcc
acaggatcttacttggctaatgcacaagaggaggattcagcccagaacctccctacggca
catgtccggccttcccacccactgaagagttttgcggtgccggcagttccacctgcgggc
gccagctatgaccctgcactgcccagcacaccgttactgacccagcaagctccgaaccat
ccagttcactcggtgaagacagcgtcgattgggactttaggaagaactcgacctcctatg
ccagtggtggttcccagtgcccctgatgtgcaggaaaccaccaggatgcttgaggactcg
gaaagcaactacgaaccggatgagctgaccaaagagatggcccacctggaaggactgatg
aaggaccttaacgccatcactacagcgtga
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integrated database retrieval system
