Cuculus canorus (common cuckoo): 104066343
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Entry
104066343 CDS
T08597
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04810
Regulation of actin cytoskeleton
cuca05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104066343 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104066343 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104066343 (CYFIP1)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104066343 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
104066343 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
104066343
NCBI-ProteinID:
XP_053911682
LinkDB
All DBs
Position
1:complement(70482522..70576036)
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AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLAKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS
LLLDKRLRSECKNQGATIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYRSM
ELAIGRFESEDLTSIVELDGLIEINKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGSKALNLAYSS
IYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaagtaacactggaggatgccttgtccaatgtggatctcttggaagaatta
ccattgccagatcagcaaccatgtattgaacctccaccatcatctctgctttaccagcca
aacttcaacactaattttgaagacagaaatgcatttgtcactggcattgcgagatacatt
gagcaagctacagtccattctagcatgaatgaaatgctagaagaggggcaggaatatgca
gtcatgttatacacatggagaagctgctcaagagccattcctcaggttaagtgcaacgag
cagcctaacagagtagaaatttatgagaaaactgtggaagttctggagccagaagtcaca
aaactgatgaattttatgtattttcagagaaatgcaattgaacgattttgtggggaggtg
aggcgcttgtgccacgcagagcggaggaaggattttgtgtctgaagcatatctgatcacg
ctgggcaaattcatcaacatgtttgccgtactggatgagttgaaaaatatgaaatgcagt
gtgaagaacgaccattcagcatacaagcgagctgctcagttcctgaggaaaatggcagat
cctcagtccattcaagaatcacagaacctttccatgttccttgccaaccacaacaagata
acacaatctttacagcagcagttggaggtaattgttggctatgaagagctgcttgcagat
attgtgaatttgtgtgtggactactatgaaaacaaaatgtatctaacacccagtgagaaa
catatgcttttaaaagttatgggctttggattgtacctgatggatggaagtgtcagtaac
atctataagcttgatgcaaagaaaaggataaatttagccaagatagacaagttcttcaag
cagttgcaggttgtcccactgtttggagacatgcagattgaacttgcaagatacattaag
accagtgcccattatgaggaaaataaatccagatggacatgcacgtcttccagcagcagt
ccccagtacaatatatgtgagcagatgatccaaatcagagaagaccatatgcgtttcata
tcagaactggctcgttacagcaacagtgaggtagtgactggatctggtcgacaggaagct
caaaagacagatgcggagtatcggaagctctttgatctctctctccaaggcctgcagctt
ctttcccagtggagtgcacatgtcatggaagtgtattcgtggaagctggtacacccaacg
gacaaatattctaataaagattgtcctgacaatgcggaagagtatgaaagagcaacaaga
tacaattatactagtgaggagaagtttgctttggttgaggtgattgccatgatcaaaggt
cttcaagtgctgatgggaaggatggaaagtgttttcaatcatgccattcgccataccatt
tatgcagctcttcaggactttgcccaagtcacacttagagagccgttaagacaagcgatt
aaaaagaagaaaaatgtcattcagagtgttttgcaggctatcagaaagacagtttgtgac
tgggaagcgggtcatgagccgttcaatgacccagctctaaggggagagaaggaccccaaa
agtggttttgacatcaaagtcccaaggcgtgcagttggaccctccagcactcagctttac
atggtgagaactatgttagagtccctcattgctgacaaaagtggttccaagaaaaccttg
agaagtagccttgaggggcccaccatattggacatagaaaaattccatcgcgagtctttc
ttctacactcatttgataaatttcagtgaaaccctgcagcaatgctgtgatctgtcccag
ctgtggttcagggaattcttcttagagctaacaatgggcagaagaatacagtttcctatt
gagatgtccatgccttggattctgacagaccatattttggagaccaaagaggcatcaatg
atggagtatgttctgtattctttggacctttataatgacagtgctcattatgcacttact
aaatttaagaagcagttcctctacgatgagattgaggcagaggtaaacctttgttttgac
caatttgtctacaagctggcggaccaaatatttgcgtactacaaggcgatggctggcagc
ctgcttctggataaacgattacgttcagaatgcaagaatcagggggcaaccattcagctg
ctacagtccaaccgctatgagacactgctgaaacaaagacatgtccaacttcttggtaga
tcaatagacctgaaccgactgatcactcagcgaatttcagcagccatgtacaggtcaatg
gaactggcaattggtcgatttgaaagtgaggatttgacttctattgtggagctggatggc
ttaatagagataaacaaaatgactcacaagcttctgagtagatatatgaccttggacagc
tttgatgccatgttcagagaagccaatcacaatgtgtctgccccatatggaagaatcact
cttcatgtcttttgggaactcaattatgatttccttccaaactactgctacaatggatcc
accaacagatttgttcggaccgtgctaccattttctcaagagtttcagagagataagcag
cctaatgcacagccacagtatctctatggatcaaaggcattgaatctggcgtattccagc
atctacagcaactacaggaattttgttggtccccctcactttaaagtcatctgtagactt
cttgggtatcagggtattgctgtggtgatggaggagttactgaaagttgtcaagagcctg
ctacaagggacgattcttcagtatgtgaagaccctaatggaagtgatgcctaagatatgt
aggttaccaagacatgagtatggttctccaggtatcttggagttttttcaccatcagctg
aaggacatcgttgagtatgcagaactgaagactgtctgcttccagaatttgcgggaagtg
ggaaatgctgtcctgttttgcctcctcattgaacagagtctgtccctagaggaggtgtgt
gacctgttgcacgcggcgccattccaaaatatcctgcccagagttcacgtcaaagagggt
gaaagacttgatgctaaaatgaagagactagaatcaaaatatgctccactacatttggtt
cctctcattgaaagactaggaacaccccagcaaatagcaatcgcaagggaaggggacttg
ctgaccaaagaacgcctctgctgtggcctgtccatgtttgaggttatcctgacaaggatc
cgctccttcctggatgatcccatctggcgcgggcccctgccgagcaatggagtgatgcac
gtggacgagtgtgtggaattccatcgcctctggagtgcaatgcagttcgtctactgcatc
cctgtgggaacacacgagtttacggtggagcagtgctttggagacggcttgcactgggct
ggctgtatgatcatcgtgcttttgggacagcagcgtcgctttgatgtgctggatttctgc
taccatctgttgaaagtccagaagcatgatggcaaagatgaggttataaagaacgtgcct
ttgaagaaaatggttgagagaattcgcaagttccagattctgaatgatgaaatcattgct
attttggacaagtatttgaagtccggtgatggagagagcacacccgtggaacacgtgcgc
tgcttccagccacctattcatcagtcccttgccagcaactag
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