Cuculus canorus (common cuckoo): 104066365
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Entry
104066365 CDS
T08597
Symbol
STAG1
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104066365 (STAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104066365 (STAG1)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104066365 (STAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Motif
Other DBs
NCBI-GeneID:
104066365
NCBI-ProteinID:
XP_053930787
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All DBs
Position
9:3169980..3364594
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AA seq
1262 aa
AA seq
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MITSDLPVLQDSTNETTAHSDAGSELEEAEVKGKRKRGRPGRPPVFFAQSATKKPRKSPA
DKGRVETGARGASRGRANGHPQQNGEGDPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDI
ALLDLINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFR
SNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVN
VALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGI
FVHRYRDAIAEIRAVCIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQ
SLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCEN
VYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLES
ELHEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQ
AAEAHPPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIIALPMLLSKYSADAEKVANLLQI
PQYFDLEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVD
IAHSQLIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFSN
CYRLLRTGIEHGAMPEQIVVQALQCSHYSILWQLVKITEGSPSKEDLLVLRKTVKSFLAV
CQQCLSNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDSGLQSELLSFVMD
HVFIDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMK
YYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKEL
ARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQDYPPPNLAFLEVLSEFSSKLL
RQDKKTVHTYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKASSV
RNKKGRPPLHKKRVEDESLEGSWLNRNENIHTPGTLQAPQLTSTVLRENTRQMGEQIQEH
ESEQGSEQDFLHNPQMQISWLGQQKLEDLNRKDRTGMNYMKGRTGVRHAVRGLMEDDAEP
IFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMP
MF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgattacttcagatttgccagtgctacaggattctacaaatgaaactactgcacactca
gatgctggcagtgagcttgaagaagcagaagtcaaaggaaaaagaaaaaggggccgtcct
ggcaggcctccagttttctttgcccagtctgccactaagaaacctcggaagtctccggcg
gacaagggtcgtgttgaaaccggagctagaggagcgagccgtggaagagccaatggccac
cctcagcagaacggagaaggggaccctgtcaccttgtttgaggtggttaagctggggaag
agcgcgatgcagtctgtggtggacgactggattgaatcatataaacaagacagggacata
gcacttctggatttaatcaacttctttatccagtgttcaggatgtcgaggtacggtaaga
attgaaatgttcaggaacatgcagaatgcagaaatcataaggaaaatgacagaagaattc
gatgaggacagcggtgattacccacttaccatgccggggccacagtggaagaagttccga
tccaacttctgcgagttcattggagtgctcattcgacagtgtcagtatagcatcatttat
gacgaatacatgatggacacggtgatctctcttctgactggtttgtcagattcccaggtc
cgggctttcaggcacaccagtacattagctgctatgaagcttatgactgctcttgtgaat
gttgccttaaacctgagcattcatcaggataatacacagaggcagtatgaagctgaaaga
aacaaaatgattggcaaaagagccaatgaaagattggagctgctgcttcagaaaagaaaa
gagctacaagaaaaccaagatgaaatcgaaaatatgatgaactctatttttaagggtata
tttgttcatagataccgtgatgctattgctgagattagagccgtctgtattgaagaaatc
ggtgtctggatgaaaatgtacagcgatgccttcctgaatgatagttatttaaaatatgtt
ggttggacactacatgacaggcaaggtgaagtgaggttgaagtgtttgaaagctcttcag
agcctgtataccaacagagagttatttccaaaactggagctgttcactaatagattcaag
gatcgcattgtatcaatgacacttgataaggaatacgatgtcgctgtggaagccattcga
ttagtcacgctaatacttcatggaagcgaagaagctctgtcgaatgaggactgcgagaat
gtttatcacttggtgtactcagcacaccggcctgtggcggtagcggctggagagttcctt
cacaaaaaactgttcagcagacatgatccccaggctgaagaagctctagcaaaaagaagg
ggacgaaatagtccaaatggaaaccttattagaatgttggtgcttttctttcttgaaagt
gagttgcacgaacatgcagcctacttggtggacagtttgtgggagagctctcaagaactg
ttgaaagactgggaatgtatgacggaattgctcttggaggagccagtccaaggagaagaa
gcgatgtcagaccggcaggagagcgctctcattgagctgatggtgtgtacgatccgccag
gctgctgaagcacatcccccggtgggcagaggcactggcaagagagtcttgacagcaaaa
gaaagaaaaactcagatagatgacagaaataaattgaccgagcatttcattattgcactt
cctatgctgctgtcaaagtattccgctgatgctgagaaggttgcaaatctcctgcaaatc
cctcagtattttgatctggaaatctatagcacgggcagaatggaaaagcatctggatgcc
ttactgaaacagataaagtttgttgtggaaaagcatgtggaatccgacgtcctagaagcc
tgcagcaaaacctacagcatactctgtagcgaagaatatacgatccagaacagagttgac
attgcccacagccaacttattgatgaatttgtggatcgattcaatcattccgtggaggat
ctgctgcaggagggtgaagaggctgatgatgatgacatttacaatgtgctctccacatta
aagaggttaacttcttttcacaatgcgcatgatctcaccaaatgggatctgttcagtaac
tgctacagattgctgaggactggaattgaacacggagctatgccggaacagatcgttgtt
caggcgctgcagtgttcccattactctattctctggcagctggtgaaaatcactgaaggc
tccccttccaaagaggacttgttggtattgaggaaaactgtgaaatcctttctggctgtc
tgccagcagtgtctgtcaaatgtcaacactccggtcaaggaacaggctttcatgctgctc
tgtgatctcctgatgatttttagtcatcagctgatgactggaggtcgagaaggtcttcag
cctttggtgtttaatccagactcaggcctccagtcagaacttctcagtttcgtgatggac
catgtctttatcgaccaagatgatgaaaaccagagcatggagggagatgaagaggatgaa
gctaacaaaatagaagctttacataagagaagaaaccttttggctgcctttagcaagctg
ataatttatgacattgtggacatgcatgcggcagcagatatcttcaagcactatatgaag
tactacaatgactacggagatatcattaaggaaaccctgagcaaaacaaggcaaattgat
aaaatccagtgtgcaaagacacttattctcagtttgcaacagctgtttaatgagctcgtt
caggagcaaggtcccaatttggaccggacgtcggcccacgtcagtggaattaaggagctg
gcccgtcgatttgccctcacttttggcttggatcagatcaagacaagagaggctgtggcc
acactacacaaagatggtatagagttcgccttcaaatatcagaatcaaaaagggcaagac
tatccacctcctaacctcgctttccttgaagtgcttagtgaattttcgtctaaactcctg
cggcaggacaaaaagactgttcacacctacttagagaagttcctgacagagcagatgatg
gagagaagagaagatgtctggctgccactcatttcctacaggaactccctagttacaggc
ggcgaggacgacaggatgtccgttaacagcggaagcagcagcagcaaagcttcctcagtg
aggaataagaaaggacggccaccgctccacaaaaagagagtagaagatgagagcctagaa
ggctcatggctgaacaggaatgaaaacatccacactcccgggacgctgcaggcaccccag
ctcacctcaaccgtcctgagagagaacaccagacaaatgggagagcagatccaggagcac
gagtcggagcagggatcggagcaagattttttacacaatccccagatgcagatctcgtgg
ctgggccaacagaaactagaagatttaaatcgaaaggacaggacaggcatgaactacatg
aaagggagaactggcgtaaggcatgcagtacgaggtctaatggaagatgacgctgagccc
atctttgaagatgtaatgatgtcctcacgaggtcagctagaggatatgaatgaagaattt
gaggacacaatggtcattgatctgcctccgtcacgaaaccggcgagaacgggctgaactg
aggccagacttcttcgactctgcagctatcattgaggacgattcaggatttgggatgccc
atgttctga
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